RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780210|ref|YP_003064623.1| hypothetical protein CLIBASIA_00475 [Candidatus Liberibacter asiaticus str. psy62] (57 letters) >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 23.7 bits (51), Expect = 9.6 Identities = 2/20 (10%), Positives = 6/20 (30%) Query: 38 NRKFIRRSEISTRTHSLSDH 57 ++ ++I L Sbjct: 92 ENCYLEGNDIHALAAKLLQE 111 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.308 0.124 0.342 Gapped Lambda K H 0.267 0.0582 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 407,717 Number of extensions: 12172 Number of successful extensions: 21 Number of sequences better than 10.0: 1 Number of HSP's gapped: 21 Number of HSP's successfully gapped: 1 Length of query: 57 Length of database: 5,693,230 Length adjustment: 29 Effective length of query: 28 Effective length of database: 4,990,154 Effective search space: 139724312 Effective search space used: 139724312 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 50 (23.4 bits)