RPS-BLAST 2.2.22 [Sep-27-2009]

Database: pdb70 
           24,244 sequences; 5,693,230 total letters

Searching..................................................done

Query= gi|254780210|ref|YP_003064623.1| hypothetical protein
CLIBASIA_00475 [Candidatus Liberibacter asiaticus str. psy62]
         (57 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
           acyl-carrier-protein, beta-ketoacyl reductase,
           beta-ketoacyl synthase, dehydratase; 4.00A
           {Saccharomyces cerevisiae}
          Length = 2006

 Score = 23.7 bits (51), Expect = 9.6
 Identities = 2/20 (10%), Positives = 6/20 (30%)

Query: 38  NRKFIRRSEISTRTHSLSDH 57
              ++  ++I      L   
Sbjct: 92  ENCYLEGNDIHALAAKLLQE 111


  Database: pdb70
    Posted date:  Jan 26, 2011 11:21 AM
  Number of letters in database: 5,693,230
  Number of sequences in database:  24,244
  
Lambda     K      H
   0.308    0.124    0.342 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 407,717
Number of extensions: 12172
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 57
Length of database: 5,693,230
Length adjustment: 29
Effective length of query: 28
Effective length of database: 4,990,154
Effective search space: 139724312
Effective search space used: 139724312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 50 (23.4 bits)