HHsearch alignment for GI: 254780212 and conserved domain: PRK13728

>PRK13728 conjugal transfer protein TrbB; Provisional.
Probab=97.34  E-value=0.00044  Score=46.57  Aligned_cols=99  Identities=12%  Similarity=0.173  Sum_probs=63.5

Q ss_pred             EECCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             88699978828986998599996511367663112610000000001233332223444321111222210000000012
Q gi|254780212|r   15 LPSNDEQEISLLALGGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLAD   94 (157)
Q Consensus        15 l~~~~g~~~~l~~l~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D   94 (157)
T Consensus        58 ~~LsdGr~vnl~dy~----lV~F~r-S~CPyChqFAP~Lk~~a~~~---gi~V~~~SlDG~g-----~~~FP~~lPa---  121 (181)
T PRK13728         58 FRLSNGRQVNLADWK----VVLFMQ-GHCPYCHQFDPVLKQLAQQY---GFSVFPYTLDGQG-----DTAFPEALPA---  121 (181)
T ss_pred             EECCCCCEECCCCEE----EEEEEC-CCCCHHHHHCHHHHHHHHHH---CCEEEEEEECCCC-----CCCCCCCCCC---
T ss_conf             588999686243418----999973-88925776588999999985---9717998536988-----8788867779---


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE-ECCC
Q ss_conf             34458998598666655766544421079998899979999-7688
Q gi|254780212|r   95 ESKEVLKSYDVWKEKSMFGKKYMGVVRTTFLIDEKGIIAQI-WKPV  139 (157)
Q Consensus        95 ~~~~~~~~~gv~~~~~~~~~~~~~~~r~tfiid~~G~I~~~-~~~~  139 (157)
T Consensus       122 -Tpei~~tfF--------~n-~~~~tPatFLvNvnT~~ayPv~qG~  157 (181)
T PRK13728        122 -PPDVMQTFF--------PN-IPVATPTTFLVNVNTLEALPLLQGA  157 (181)
T ss_pred             -CHHHHHHHC--------CC-CCCCCCEEEEEECCCCCEECCCCCC
T ss_conf             -879999974--------78-9878861699733741100111165