HHsearch alignment for GI: 254780212 and conserved domain: TIGR02661
>TIGR02661 MauD methylamine dehydrogenase accessory protein MauD; InterPro: IPR013478 MauD appears critical to proper formation of the small subunit of methylamine dehydrogenase, which has both an unusual tryptophan tryptophylquinone cofactor and multiple disulphide bonds. MauD shares sequence similarity, including a CPxC motif, with a number of thiol:disulphide interchange proteins. In MauD mutants, the small subunit apparently does not form properly and is rapidly degraded .; GO: 0030416 methylamine metabolic process.
Probab=99.07 E-value=6.7e-11 Score=88.40 Aligned_cols=128 Identities=23% Similarity=0.386 Sum_probs=96.9
Q ss_pred CCCCCCCCEEEECCCCCEEEHHH--HCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79865373078869997882898--6998599996511367663112610000000001233332223444321111222
Q gi|254780212|r 5 SVGDKAPHFVLPSNDEQEISLLA--LGGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFH 82 (157)
Q Consensus 5 ~vG~~aP~f~l~~~~g~~~~l~~--l~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~ 82 (157)
T Consensus 47 DvG~~aP~F~l~~f~G~~V~iG~~~a~~R~~LLMFT-aPsCPvC~KL~PiIkSia-~~E--~~~Vv~ISDG~~~EHr~FL 122 (189)
T TIGR02661 47 DVGDAAPIFNLPDFDGEPVRIGGSIALGRPTLLMFT-APSCPVCDKLLPIIKSIA-RAE--EIDVVLISDGTPEEHRRFL 122 (189)
T ss_pred CCCCCCCEECCCCCCCCEEEECCCCCCCCCEEEEEC-CCCCCHHHHHHHHHHHHH-HHH--CCCEEEEECCCCHHHHHHH
T ss_conf 745558710576667864561175567775035443-888853224327898888-672--5325897279927999886
Q ss_pred CCCCCC---CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC-CCCCCHHHHHHHHHH
Q ss_conf 210000---000012344589985986666557665444210799988999799997688-857899999999998
Q gi|254780212|r 83 QKHNLS---ITLLADESKEVLKSYDVWKEKSMFGKKYMGVVRTTFLIDEKGIIAQIWKPV-TLKNHAQSVLKMVKS 154 (157)
Q Consensus 83 ~~~~~~---fpil~D~~~~~~~~~gv~~~~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~-~~~~~~~eil~~i~~ 154 (157)
T Consensus 123 ~~H~L~~~~YVV-S---AE~GM~fQV------------~KiPYGVLLD~~G~I~AK--GL~NTREHlESLlEa~r~ 180 (189)
T TIGR02661 123 KDHELGEERYVV-S---AEIGMAFQV------------GKIPYGVLLDQDGVIRAK--GLTNTREHLESLLEADRE 180 (189)
T ss_pred HCCCCCCEEEEE-E---ECCCCCCCC------------CCCCCEEEECCCCEEEEC--CCCCHHHHHHHHHHHCCC
T ss_conf 428888713788-6---202210011------------225622566799747742--676438889998862003