HHsearch alignment for GI: 254780212 and conserved domain: cd00340

>cd00340 GSH_Peroxidase Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.
Probab=99.27  E-value=1e-11  Score=93.40  Aligned_cols=135  Identities=18%  Similarity=0.288  Sum_probs=93.8

Q ss_pred             CCCEEEECCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCC
Q ss_conf             3730788699978828986998599996511367663112610000000001233332223444--------32111122
Q gi|254780212|r   10 APHFVLPSNDEQEISLLALGGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPD--------SIASHKKF   81 (157)
Q Consensus        10 aP~f~l~~~~g~~~~l~~l~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d--------~~~~~~~~   81 (157)
T Consensus         2 ~yd~~~~~idG~~~~l~~y~GkvvLiVNv-AS~Cg-~t~qy~~L~~L~~ky~~~gl~Il~fPcnqFg~QEp~~~~eI~~f   79 (152)
T cd00340           2 IYDFSVKDIDGEPVSLSKYKGKVLLIVNV-ASKCG-FTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEF   79 (152)
T ss_pred             CCCEEEECCCCCEECHHHCCCCEEEEEEC-CCCCC-CCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCHHHHHHH
T ss_conf             11137667998994589939978999966-77888-87248899999998412884999636688613499978999999


Q ss_pred             CCC-CCCCCCCHH--HHH----HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHH
Q ss_conf             221-000000001--234----4589985986666557665444210799988999799997688857899999999
Q gi|254780212|r   82 HQK-HNLSITLLA--DES----KEVLKSYDVWKEKSMFGKKYMGVVRTTFLIDEKGIIAQIWKPVTLKNHAQSVLKM  151 (157)
Q Consensus        82 ~~~-~~~~fpil~--D~~----~~~~~~~gv~~~~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~~~~~~~~eil~~  151 (157)
T Consensus        80 ~~~~y~v~Fpv~~K~~VnG~~~hply~~Lk~~-~~~~~~-~~i~WNF~KfLid~~G~vv~rf~~~~---~p~~l~~~  151 (152)
T cd00340          80 CETNYGVTFPMFAKIDVNGENAHPLYKYLKEE-APGLLG-KDIKWNFTKFLVDRDGEVVKRFAPTT---DPEELEKD  151 (152)
T ss_pred             HHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH-CCCCCC-CCCCCCCEEEEECCCCCEEEEECCCC---CHHHHHHC
T ss_conf             99706876222766506798768899999975-798878-98762138999989998998879999---98999602