HHsearch alignment for GI: 254780212 and conserved domain: cd02963
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=98.26 E-value=4e-06 Score=59.07 Aligned_cols=89 Identities=10% Similarity=0.112 Sum_probs=66.8
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 99859999651136766311261000000000123333222344432111122221000000001234458998598666
Q gi|254780212|r 29 GGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYDVWKE 108 (157)
Q Consensus 29 ~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~gv~~~ 108 (157)
T Consensus 23 ~~kPvlV~F~-A~WC~pC~~l~P~~~~~a~ele~~~v~~~~Vn~d---------------------~~~~la~~~gV~s- 79 (111)
T cd02963 23 FKKPYLIKIT-SDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAG---------------------HERRLARKLGAHS- 79 (111)
T ss_pred CCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC---------------------CCHHHHHHCCCCC-
T ss_conf 8973999999-9747878865079999999834575599999488---------------------6989999819986-
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 65576654442107999889997999976888578999999999985
Q gi|254780212|r 109 KSMFGKKYMGVVRTTFLIDEKGIIAQIWKPVTLKNHAQSVLKMVKSL 155 (157)
Q Consensus 109 ~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~~~~~~~~eil~~i~~L 155 (157)
T Consensus 80 -----------iPtl~~~-~~G~~v~~~~G~~s---~~~i~~Fi~kl 111 (111)
T cd02963 80 -----------VPAIVGI-INGQVTFYHDSSFT---KQHVVDFVRKL 111 (111)
T ss_pred -----------CCEEEEE-ECCEEEEEECCCCC---HHHHHHHHHHC
T ss_conf -----------8989999-99999886637679---89999999739