HHsearch alignment for GI: 254780212 and conserved domain: cd02975
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=92.68 E-value=0.36 Score=28.64 Aligned_cols=92 Identities=16% Similarity=0.221 Sum_probs=48.7
Q ss_pred HHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 89869985999965113676631126100000000012333322234443211112222100000000123445899859
Q gi|254780212|r 25 LLALGGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYD 104 (157)
Q Consensus 25 l~~l~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~g 104 (157)
T Consensus 16 l~~l~~pV~ivvF~~~~~c~yc~-~t~~ll~ela~lsdK-i~---------------~~~~~------~~~d~e~a~k~g 72 (113)
T cd02975 16 FKEMKNPVDLVVFSSKEGCQYCE-VTKQLLEELSELSDK-LK---------------LEIYD------FDEDKEKAEKYG 72 (113)
T ss_pred HHHCCCCEEEEEEECCCCCCCHH-HHHHHHHHHHHHCCC-EE---------------EEEEC------CCCCHHHHHHHC
T ss_conf 98579986999995798871169-999999999974885-38---------------99966------766979999839
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCC---CEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 8666655766544421079998899---979999768885789999999999
Q gi|254780212|r 105 VWKEKSMFGKKYMGVVRTTFLIDEK---GIIAQIWKPVTLKNHAQSVLKMVK 153 (157)
Q Consensus 105 v~~~~~~~~~~~~~~~r~tfiid~~---G~I~~~~~~~~~~~~~~eil~~i~ 153 (157)
T Consensus 73 Ver------------~Pti~i~~~~~~~~~ir--f~GiP~G~Ef~slie~Ii 110 (113)
T cd02975 73 VER------------VPTTIFLQDGGKDGGIR--YYGLPAGYEFASLIEDIV 110 (113)
T ss_pred CEE------------CCEEEEECCCCCCCCEE--EEECCCCHHHHHHHHHHH
T ss_conf 814------------65799974888755269--950786276999999998