HHsearch alignment for GI: 254780212 and conserved domain: cd02999
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=96.23 E-value=0.0013 Score=43.57 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=52.6
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 99859999651136766311261000000000123333222344432111122221000000001234458998598666
Q gi|254780212|r 29 GGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYDVWKE 108 (157)
Q Consensus 29 ~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~gv~~~ 108 (157)
T Consensus 17 ~~~~vlV~FY-ApWC~hCk~l~P~~~~la~~~~~--~~~~a~~--~------------------~~~~~~l~~~ygV~g- 72 (100)
T cd02999 17 REDYTAVLFY-ASWCPFSASFRPHFNALSSMFPQ--IRHLAIE--E------------------SSIKPSLLSRYGVVG- 72 (100)
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CCEEEEE--E------------------CCCCHHHHHHCCCCC-
T ss_conf 8952999999-78888889871899999987899--8489999--5------------------457866787467543-
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHH
Q ss_conf 6557665444210799988999799997688857899999999
Q gi|254780212|r 109 KSMFGKKYMGVVRTTFLIDEKGIIAQIWKPVTLKNHAQSVLKM 151 (157)
Q Consensus 109 ~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~~~~~~~~eil~~ 151 (157)
T Consensus 73 -----------~PTi~lf-~~g~~~-~Y~G---~Rt~~~l~~F 99 (100)
T cd02999 73 -----------FPTILLF-NSTPRV-RYNG---TRTLDSLAAF 99 (100)
T ss_pred -----------CCEEEEE-CCCCEE-CCCC---CCCHHHHHHH
T ss_conf -----------6579996-799660-4789---9898999854