HHsearch alignment for GI: 254780212 and conserved domain: cd03002
>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein. MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.
Probab=96.89 E-value=0.0022 Score=42.29 Aligned_cols=91 Identities=12% Similarity=0.149 Sum_probs=51.9
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 99859999651136766311261000000000123333222344432111122221000000001234458998598666
Q gi|254780212|r 29 GGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYDVWKE 108 (157)
Q Consensus 29 ~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~gv~~~ 108 (157)
T Consensus 17 ~~~~~lV~Fy-ApWC~~Ck~~~P~~~~~a~~~~~~-~~~~~vd~d~~-------------------~~~~i~~~~~I~~- 74 (109)
T cd03002 17 TNYTTLVEFY-APWCGHCKNLKPEYAKAAKELDGL-VQVAAVDCDED-------------------KNKPLCGKYGVQG- 74 (109)
T ss_pred CCCCEEEEEE-CCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEECCCC-------------------CCHHHHHHCCCCC-
T ss_conf 9983999998-886811677679999999980887-22899965634-------------------2465798769844-
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEE-EECCCCCCCCHHHHHHHH
Q ss_conf 65576654442107999889997999-976888578999999999
Q gi|254780212|r 109 KSMFGKKYMGVVRTTFLIDEKGIIAQ-IWKPVTLKNHAQSVLKMV 152 (157)
Q Consensus 109 ~~~~~~~~~~~~r~tfiid~~G~I~~-~~~~~~~~~~~~eil~~i 152 (157)
T Consensus 75 -----------~PTi~~f~~G~~~~k~~~~~y~G~Rt~~~i~~Fi 108 (109)
T cd03002 75 -----------FPTLKVFRPPKKASKHAVEDYNGERSAKAIVDFV 108 (109)
T ss_pred -----------CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf -----------8879999596404777862557888999999965