RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780213|ref|YP_003064626.1| hypothetical protein
CLIBASIA_00490 [Candidatus Liberibacter asiaticus str. psy62]
         (63 letters)



>2qg3_A UPF0130 protein AF_2059; 2648472, uncharacterized protein
           AF2059, TYW3 like, structural genomics; HET: MSE; 1.95A
           {Archaeoglobus fulgidus dsm 4304} (A:)
          Length = 208

 Score = 25.6 bits (56), Expect = 2.3
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 4   ITSLSKWDIEVNSILKEEIDDISVVSLPL-SDDNMTIDEEYLEKLVVESLDRSLRCNYEK 62
           + SLS + +E+ S+ + E+        P+       +D+ YL  +V  + ++ L    EK
Sbjct: 138 VISLSNYVVEIASLERIEL--------PVAEKGLXLVDDAYLSYVVRWANEK-LLKGKEK 188


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.313    0.133    0.362 

Gapped
Lambda     K      H
   0.267   0.0596    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 471,945
Number of extensions: 16185
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 5
Length of query: 63
Length of database: 4,956,049
Length adjustment: 31
Effective length of query: 32
Effective length of database: 3,908,094
Effective search space: 125059008
Effective search space used: 125059008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.3 bits)