RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780213|ref|YP_003064626.1| hypothetical protein CLIBASIA_00490 [Candidatus Liberibacter asiaticus str. psy62] (63 letters) >d1ji8a_ d.203.1.1 (A:) DsrC, the gamma subunit of dissimilatory sulfite reductase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 111 Score = 23.5 bits (51), Expect = 4.5 Identities = 7/38 (18%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Query: 2 GFITSLSKWDIEVNSILKEEIDDISVVSLPLSDDNMTI 39 F+ + WD +V L E++ I +++++ + Sbjct: 22 CFMQNPEDWDEKVAEWLARELEGI----QKMTEEHWKL 55 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.313 0.133 0.362 Gapped Lambda K H 0.267 0.0643 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 241,434 Number of extensions: 8975 Number of successful extensions: 22 Number of sequences better than 10.0: 1 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 4 Length of query: 63 Length of database: 2,407,596 Length adjustment: 32 Effective length of query: 31 Effective length of database: 1,968,236 Effective search space: 61015316 Effective search space used: 61015316 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 47 (22.1 bits)