HHsearch alignment for GI: 254780214 and conserved domain: COG1782
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only].
Probab=99.40 E-value=1.2e-12 Score=98.26 Aligned_cols=189 Identities=23% Similarity=0.260 Sum_probs=99.3
Q ss_pred CEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHH---------HHHHHCCC
Q ss_conf 725999985417896513378878777787677444306999933677897189998798415---------66752233
Q gi|254780214|r 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY---------MQVLREQV 73 (271)
Q Consensus 3 ~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r---------~ql~~~~i 73 (271)
T Consensus 179 ~wvRvt~LGg~~E---------------------VGRSa~lv~T-----~eSrVLlDcG~n~a~~~~~~~Pyl~vpE~~~ 232 (637)
T COG1782 179 RWVRVTALGGFRE---------------------VGRSALLVST-----PESRVLLDCGVNVAGNGEDAFPYLDVPEFQP 232 (637)
T ss_pred CEEEEEEECCCHH---------------------CCCEEEEEEC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4599996124112---------------------0625699736-----8833899636567788643574455610251
Q ss_pred CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC-CCCCC---CCCCCCCCCCC------CCCCCCC
Q ss_conf 42059999743524220111024333178211101311202321002-22210---13667753100------1232112
Q gi|254780214|r 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE-SFRYC---FKALDDRTYPP------IVNPIVI 143 (271)
Q Consensus 74 ~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~-~~~y~---f~~~~~~~~~~------~~~~~~~ 143 (271)
T Consensus 233 ~~lDAViiTHAHLDH~G~l----P~LfkYgy~GPVY~T~PTRDlm~LLq~Dyi~va~keg~~ppY~~k~v~~~lkhtItl 308 (637)
T COG1782 233 DELDAVIITHAHLDHCGFL----PLLFKYGYDGPVYCTPPTRDLMVLLQLDYIEVAEKEGGEPPYESKDVRKVLKHTITL 308 (637)
T ss_pred CCCCEEEEEECCCCCCCCH----HHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEE
T ss_conf 2053699850234434521----456651788874317971889999988799999964999998878999887545410
Q ss_pred CCCCCCCCEECCCCCEEEEEEEEECCCEECC-CCCCC----CEEEECCCCCCHHHHHHH----HCCHHEEEEECCCCCCC
Q ss_conf 3443334201158748999999507762112-33468----625303233001678886----22211025302335768
Q gi|254780214|r 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSL-GFRFG----NVAYCTDVNAFPAESLEK----LQNLDFLIIDALKNGLH 214 (271)
Q Consensus 144 ~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~-Gyri~----~~~Y~~Dt~~~~e~~~~~----l~~~D~lI~d~l~~~~~ 214 (271)
T Consensus 309 dYgevTD--I--aPDirLTf~NAGHILGSA~~HlHIGdGlyNi~yTGDfk~~~trLl~~A~n~FpRvEtlimEsTYGg~~ 384 (637)
T COG1782 309 DYGEVTD--I--APDIRLTFYNAGHILGSAMAHLHIGDGLYNIVYTGDFKFEKTRLLEPANNKFPRVETLIMESTYGGRD 384 (637)
T ss_pred CCCCCCC--C--CCCCEEEEECCCCHHCCEEEEEEECCCCEEEEEECCCCCCCEECCCHHHCCCCCHHEEEEEECCCCCC
T ss_conf 2576244--6--87617898416410131015888648713579943444440120573333683232046530137754
Q ss_pred CCCCCHHHHHH
Q ss_conf 87579999999
Q gi|254780214|r 215 SSHFSLSESLK 225 (271)
Q Consensus 215 ~~H~~~~ea~~ 225 (271)
T Consensus 385 d~q~~R~eaE~ 395 (637)
T COG1782 385 DVQPPREEAEK 395 (637)
T ss_pred CCCCCHHHHHH
T ss_conf 45776789999