HHsearch alignment for GI: 254780214 and conserved domain: COG1782

>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only].
Probab=99.40  E-value=1.2e-12  Score=98.26  Aligned_cols=189  Identities=23%  Similarity=0.260  Sum_probs=99.3

Q ss_pred             CEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHH---------HHHHHCCC
Q ss_conf             725999985417896513378878777787677444306999933677897189998798415---------66752233
Q gi|254780214|r    3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY---------MQVLREQV   73 (271)
Q Consensus         3 ~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r---------~ql~~~~i   73 (271)
T Consensus       179 ~wvRvt~LGg~~E---------------------VGRSa~lv~T-----~eSrVLlDcG~n~a~~~~~~~Pyl~vpE~~~  232 (637)
T COG1782         179 RWVRVTALGGFRE---------------------VGRSALLVST-----PESRVLLDCGVNVAGNGEDAFPYLDVPEFQP  232 (637)
T ss_pred             CEEEEEEECCCHH---------------------CCCEEEEEEC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             4599996124112---------------------0625699736-----8833899636567788643574455610251


Q ss_pred             CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC-CCCCC---CCCCCCCCCCC------CCCCCCC
Q ss_conf             42059999743524220111024333178211101311202321002-22210---13667753100------1232112
Q gi|254780214|r   74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE-SFRYC---FKALDDRTYPP------IVNPIVI  143 (271)
Q Consensus        74 ~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~-~~~y~---f~~~~~~~~~~------~~~~~~~  143 (271)
T Consensus       233 ~~lDAViiTHAHLDH~G~l----P~LfkYgy~GPVY~T~PTRDlm~LLq~Dyi~va~keg~~ppY~~k~v~~~lkhtItl  308 (637)
T COG1782         233 DELDAVIITHAHLDHCGFL----PLLFKYGYDGPVYCTPPTRDLMVLLQLDYIEVAEKEGGEPPYESKDVRKVLKHTITL  308 (637)
T ss_pred             CCCCEEEEEECCCCCCCCH----HHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEE
T ss_conf             2053699850234434521----456651788874317971889999988799999964999998878999887545410


Q ss_pred             CCCCCCCCEECCCCCEEEEEEEEECCCEECC-CCCCC----CEEEECCCCCCHHHHHHH----HCCHHEEEEECCCCCCC
Q ss_conf             3443334201158748999999507762112-33468----625303233001678886----22211025302335768
Q gi|254780214|r  144 ENNDVPICMKSAGGVIEAIPILQQHGRISSL-GFRFG----NVAYCTDVNAFPAESLEK----LQNLDFLIIDALKNGLH  214 (271)
Q Consensus       144 ~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~-Gyri~----~~~Y~~Dt~~~~e~~~~~----l~~~D~lI~d~l~~~~~  214 (271)
T Consensus       309 dYgevTD--I--aPDirLTf~NAGHILGSA~~HlHIGdGlyNi~yTGDfk~~~trLl~~A~n~FpRvEtlimEsTYGg~~  384 (637)
T COG1782         309 DYGEVTD--I--APDIRLTFYNAGHILGSAMAHLHIGDGLYNIVYTGDFKFEKTRLLEPANNKFPRVETLIMESTYGGRD  384 (637)
T ss_pred             CCCCCCC--C--CCCCEEEEECCCCHHCCEEEEEEECCCCEEEEEECCCCCCCEECCCHHHCCCCCHHEEEEEECCCCCC
T ss_conf             2576244--6--87617898416410131015888648713579943444440120573333683232046530137754


Q ss_pred             CCCCCHHHHHH
Q ss_conf             87579999999
Q gi|254780214|r  215 SSHFSLSESLK  225 (271)
Q Consensus       215 ~~H~~~~ea~~  225 (271)
T Consensus       385 d~q~~R~eaE~  395 (637)
T COG1782         385 DVQPPREEAEK  395 (637)
T ss_pred             CCCCCHHHHHH
T ss_conf             45776789999