HHsearch alignment for GI: 254780214 and conserved domain: PRK02126

>PRK02126 ribonuclease Z; Provisional.
Probab=100.00  E-value=3.6e-33  Score=225.84  Aligned_cols=206  Identities=17%  Similarity=0.276  Sum_probs=142.0

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEEC
Q ss_conf             06999933677897189998798415667522334205999974352422011102433317821110131120232100
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF  119 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~  119 (271)
T Consensus        17 p~l~v~~~---~~~~~lLfDcGe--~~~l~~~~l~~Id~IFITHlHgDH~~GL~gLLr~~~gr~~~L~IyGP~Gl~~~v~   91 (334)
T PRK02126         17 PGLYVDFL---FERRALLFDLGD--LHHLPPRELLRISHIFVSHTHMDHFIGFDRLLRLCLGRPRRLRLFGPPGFADQVE   91 (334)
T ss_pred             CEEEEEEC---CCCCEEEEECCC--CCCCCHHHHCCCCEEEEECCCCCHHCCCHHHHHHHCCCCCCEEEECCCCHHHHHH
T ss_conf             87999716---798189998998--4300645646547699826762212357999986279998629999824899999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCCCCC-----------------------CCCCCCCCCEECCCCCEEEEEEEEECCCEECCC
Q ss_conf             2222-1013667753100123211-----------------------234433342011587489999995077621123
Q gi|254780214|r  120 ESFR-YCFKALDDRTYPPIVNPIV-----------------------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG  175 (271)
Q Consensus       120 ~~~~-y~f~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~G  175 (271)
T Consensus        92 ~~L~~y~wnl~~--~~~~~~~v~~~e~~~~~~~~~~f~~~~~F~~~~~~~~~~~~~~i~e~~~~~V~a~~l~H-~ip~~g  168 (334)
T PRK02126         92 HKLAGYTWNLVE--NYPTTFRVHEVELHDGRIRRALFRCRRAFRREAEEELSREDGVLLDEPWFRVRAAFLDH-GIPCLA  168 (334)
T ss_pred             HHHHHHHHCCCC--CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCC-CCCCCE
T ss_conf             986331110124--57741389999605653222112432123334322345778657857987999997479-876407


Q ss_pred             CCCC-----------------------------------------------------------------------CEEEE
Q ss_conf             3468-----------------------------------------------------------------------62530
Q gi|254780214|r  176 FRFG-----------------------------------------------------------------------NVAYC  184 (271)
Q Consensus       176 yri~-----------------------------------------------------------------------~~~Y~  184 (271)
T Consensus       169 Y~i~E~~~~~i~~~kl~~~Gv~~Gp~l~~LK~~~~~~~~~g~~i~v~~~~~~~~~~~~~~~~~l~~~v~~~~~G~ki~y~  248 (334)
T PRK02126        169 FALEEKAHVNIDKNRLAELGLPPGPWLRELKHAVLRGEPDDTPIRVPWRDGGGERERTRPLGELKEAILRIVPGQKIGYV  248 (334)
T ss_pred             EEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE
T ss_conf             99997887671899999769998738999976553146688458842255665554335402322201457899789999


Q ss_pred             CCCCCCHH---HHHHHHCCHHEEEEECCCCCC------CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC--HHHHHHHC
Q ss_conf             32330016---788862221102530233576------88757999999999972997799976888988--88999867
Q gi|254780214|r  185 TDVNAFPA---ESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLD--YDMVLKST  253 (271)
Q Consensus       185 ~Dt~~~~e---~~~~~l~~~D~lI~d~l~~~~------~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~--~~~~~~~~  253 (271)
T Consensus       249 tDT~~~~~n~~~i~~~a~~aDlLvhEaTF~~~d~~~A~~~~HsTa~qAa~iAk~a~vk~LiLtHfS~RY~~~~~~l~~Ea  328 (334)
T PRK02126        249 TDIGYTPENLARIVELAAGVDLLFIEAVFLDEDAEKARRKNHLTARQAGRLAREAGVRRLVPFHFSPRYQGRPAELYREA  328 (334)
T ss_pred             EECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf             76788811789999986479899996567622798886559985999999999859998998750634589869999999