HHsearch alignment for GI: 254780214 and conserved domain: PRK05184
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional.
Probab=100.00 E-value=0 Score=365.31 Aligned_cols=249 Identities=21% Similarity=0.295 Sum_probs=192.6
Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCCC----CCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHC-------CC
Q ss_conf 59999854178965133788787777876----77444306999933677897189998798415667522-------33
Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QV 73 (271)
Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~----~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~-------~i 73 (271)
T Consensus 1 M~v~vLGta~~gGvPq~gC~c~~C~~ar~~~~~~~~Rt~sSi~v~~dg~~----~~LiDasPDlr~QL~~~~~l~p~~~~ 76 (302)
T PRK05184 1 MRIIVLGSAAGGGFPQWNCNCPNCRGARAGTIRAQPRTQSSIAVSADGED----WVLVNASPDIRQQIRATPALQPARGL 76 (302)
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCE----EEEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 98999997778962558989701704224885566541148999828986----99998993899998651441754344
Q ss_pred --CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --420599997435242201110243331782111013112023210022221013667753100123211234433342
Q gi|254780214|r 74 --LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 (271)
Q Consensus 74 --~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271)
T Consensus 77 r~s~i~~V~lTHaH~dH~~GL~~LR-----e~~~i~vya~~~~~~~L~~~~p~-~~~l~~~~~---v~~~~i~~~~-~~~ 146 (302)
T PRK05184 77 RDTPIAAVVLTDGQIDHVTGLLSLR-----EGQPFPLYATPMVLEDLSTGFPI-FNVLDHYCG---VDRRPIALDG-PFA 146 (302)
T ss_pred CCCCCCEEEEECCCCCHHCCHHHHH-----CCCCCCEEECHHHHHHHHHCCCH-HHHHCCCCC---CCCEECCCCC-CCC
T ss_conf 5787348998657500331788871-----56972067468999999863988-785333466---2102414688-623
Q ss_pred EECCCCCEEEEEEEEE----------CCC--EECCCCCC------CCEEEECCCCCCHHHHHHHHCCHHEEEEECCCCCC
Q ss_conf 0115874899999950----------776--21123346------86253032330016788862221102530233576
Q gi|254780214|r 152 MKSAGGVIEAIPILQQ----------HGR--ISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 (271)
Q Consensus 152 ~~~~~~~i~i~~~~~~----------Hg~--~~~~Gyri------~~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~~ 213 (271)
T Consensus 147 ~-~~~~gl~v~p~~Vp~k~p~~~~h~~~~~~~etvG~~i~~~~~gk~~~YipD~~~~~~~~~~~l~~~D~~l~DGTf~~~ 225 (302)
T PRK05184 147 V-PGLPGLRFTAFPVPSKAPPYSPHRGDPHPGDNIGLRIEDTATGRRLFYAPGLAEVTDDLRARLAGADCVLFDGTLWRD 225 (302)
T ss_pred C-CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCC
T ss_conf 4-787981899986488777654445678768468999972788717999448565688999998469989995002245
Q ss_pred -----------------CCCCCCHHHHHHHHHHCCCCEEEEECCCCCC-----CHHHHHHHCCCCCEEEEECCEEEE
Q ss_conf -----------------8875799999999997299779997688898-----888999867998199020448996
Q gi|254780214|r 214 -----------------HSSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 (271)
Q Consensus 214 -----------------~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~-----~~~~~~~~~~~~v~~A~DGm~i~l 268 (271)
T Consensus 226 dEm~~~~~~~k~~r~m~H~p~~~~~~sl~~l~~l~~~rkifiHiNhTNP~l~~~s~e~~~v~~~G~~vA~dGm~~~L 302 (302)
T PRK05184 226 DEMIRAGLGTKTGRRMGHLAQSGPGGMIAALADLPIARKVLIHINNTNPILDEDSPERAELEAAGWEVAHDGMEIEL 302 (302)
T ss_pred CCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEC
T ss_conf 20000366766667788788787477999997479887899982699814376878788787679888068878879