HHsearch alignment for GI: 254780214 and conserved domain: PRK11539

Probab=98.82  E-value=2.1e-07  Score=65.58  Aligned_cols=63  Identities=24%  Similarity=0.416  Sum_probs=45.5

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC-----HHHH-----HHHCCC
Q ss_conf             259999854178965133788787777876774443069999336778971899987984-----1566-----752233
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-----FYMQ-----VLREQV   73 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d-----~r~q-----l~~~~i   73 (271)
T Consensus       498 ~~~v~~LDVGQ------------------------G~avlI~~-----~~~~~L~DtG~~~~~~~~g~~vi~P~L~~~Gi  548 (754)
T PRK11539        498 EWRVDMLDVGQ------------------------GLAMVIER-----NGKAILYDTGNAWPEGDSAQQVIIPWLRWHNL  548 (754)
T ss_pred             CCEEEEEECCC------------------------CEEEEEEE-----CCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             60899997278------------------------51899998-----99789995799888887237788999996799


Q ss_pred             CCCCEEEEECCCHHHHHHCCHHH
Q ss_conf             42059999743524220111024
Q gi|254780214|r   74 LSIDAVLYTHPHADHIHGIDGLR   96 (271)
Q Consensus        74 ~~Id~I~iTH~H~DHi~Gl~~Lr   96 (271)
T Consensus       549 -~lD~lvlSH~D~DH~GGl~~ll  570 (754)
T PRK11539        549 -TPEGVILSHEHLDHRGGLASLL  570 (754)
T ss_pred             -CCEEEEECCCCCCCCCCHHHHH
T ss_conf             -7208994588500126899999