HHsearch results for GI: 254780214 and protein with PDBid: 1vjn_A

>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.51  E-value=4.7e-13  Score=99.38  Aligned_cols=154  Identities=18%  Similarity=0.214  Sum_probs=98.6

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEEC
Q ss_conf             25999985417896513378878777787677444306999933677897189998798415667522334205999974
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTH   83 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH   83 (271)
                      -||||+||.                           +|++|+.     ++.+||||.-....  -.....-++|+|++||
T Consensus        12 ~MkIt~lGh---------------------------s~~lIe~-----~g~~ILiDP~~~~~--~~~~~~~~~D~VliSH   57 (220)
T 1vjn_A           12 HMKITWFGH---------------------------ACFALEM-----EGKTIVTDPFDESV--GYPIPNVTADVVTESH   57 (220)
T ss_dssp             CEEEEEEET---------------------------TEEEEEE-----TTEEEEESCCC-------CCCCCBCSEEECSS
T ss_pred             EEEEEEEEC---------------------------CEEEEEE-----CCEEEEECCCCCCC--CCCCCCCCCCEEEECC
T ss_conf             189999703---------------------------1999998-----99999989998877--8987778788999668


Q ss_pred             CCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEE
Q ss_conf             35242201110243331782111013112023210022221013667753100123211234433342011587489999
Q gi|254780214|r   84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP  163 (271)
Q Consensus        84 ~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~  163 (271)
                      .|.||...  .    .. .+.+ .+      .   ..                            ....  ..++++++.
T Consensus        58 ~H~DH~~~--~----~~-~~~~-~v------~---~~----------------------------~g~~--~~~~~~I~~   90 (220)
T 1vjn_A           58 QHFDHNAH--H----LV-KGNF-RV------I---DR----------------------------PGAY--TVNGVKIKG   90 (220)
T ss_dssp             CC---CGG--G----GC-BSSC-EE------E---CS----------------------------SEEE--EETTEEEEE
T ss_pred             CCCCCCCH--H----HC-CCCE-EE------E---CC----------------------------CCEE--EECCEEECC
T ss_conf             78676751--2----31-4626-99------6---04----------------------------5659--979822124


Q ss_pred             EEEECCC------EECCCCCCC----CEEEECCCCCCHH-HHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             9950776------211233468----6253032330016-7888622211025302335768875799999999997299
Q gi|254780214|r  164 ILQQHGR------ISSLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINP  232 (271)
Q Consensus       164 ~~~~Hg~------~~~~Gyri~----~~~Y~~Dt~~~~e-~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~  232 (271)
                      ++..|.+      ..++||.++    ++.|++|+...+. +.+..+.++|++++..   + .+.||+.+||+++++.++|
T Consensus        91 v~a~H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~~~~~~~~~~~~~Dva~lPi---g-g~~~m~~~eA~~~~~~l~p  166 (220)
T 1vjn_A           91 VETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPV---G-GTYTIGPKEAKEVADLLNA  166 (220)
T ss_dssp             EEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEEC---C-SSSSCCHHHHHHHHHHTTC
T ss_pred             CCCEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEC---C-CCCCCCHHHHHHHHHHHCC
T ss_conf             32065188885478757999984992999968988898999998528976899944---9-9653899999999997099


Q ss_pred             CEEEEECCCC
Q ss_conf             7799976888
Q gi|254780214|r  233 KNAILTHMHV  242 (271)
Q Consensus       233 k~~~LtHls~  242 (271)
                      |.++-+|...
T Consensus       167 k~vIP~H~~t  176 (220)
T 1vjn_A          167 KVIIPMHYKT  176 (220)
T ss_dssp             SEEEEESCCC
T ss_pred             CEEEEEECCC
T ss_conf             9999970599