HHsearch results for GI: 254780214 and protein with PDBid: 1y44_A

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=100.00  E-value=1.5e-40  Score=270.41  Aligned_cols=237  Identities=19%  Similarity=0.231  Sum_probs=158.5

Q ss_pred             EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCC--CCCCEEEEE
Q ss_conf             599998541789651337887877778767744430699993367789718999879841566752233--420599997
Q gi|254780214|r    5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYT   82 (271)
Q Consensus         5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i--~~Id~I~iT   82 (271)
                      |||+|||||++  +|.+              .|..+|.++....  .++.+||||||+|++.||++.++  ++||+||||
T Consensus         1 Mkv~~LGtg~~--~p~~--------------~r~~s~~~v~~~~--~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~I~iT   62 (320)
T 1y44_A            1 MELLFLGTGAG--IPAK--------------ARNVTSVALKLLE--ERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFIT   62 (320)
T ss_dssp             CEEEEEECBSS--SCCS--------------SCCBCEEEEEETT--TTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECS
T ss_pred             CEEEEEEECCC--CCCC--------------CCCCCEEEEEEEE--CCCCEEEEECCHHHHHHHHHCCCCHHHCCEEEEC
T ss_conf             98999977899--7999--------------9976889999980--6994899949779999999839996676689972


Q ss_pred             CCCHHHHHHCCHHHH--HHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEE
Q ss_conf             435242201110243--331782111013112023210022221013667753100123211234433342011587489
Q gi|254780214|r   83 HPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE  160 (271)
Q Consensus        83 H~H~DHi~Gl~~Lr~--~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  160 (271)
                      |.|+||+.|++.+..  +......++++|+|+.+.+.+...+.+...........          .+.............
T Consensus        63 H~H~DH~~Gl~~~~~~~~~~~~~~~~~iy~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~~~~~~~~~  132 (320)
T 1y44_A           63 HMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAI----------QEIEEGIVFEDDQFI  132 (320)
T ss_dssp             BCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEE----------EECCSEEEEECSSEE
T ss_pred             CCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE----------EECCCCCEEECCCEE
T ss_conf             4456651671355555553167765423477017889987665320255665312----------552677401046325


Q ss_pred             EEEEEEECCC---------------------------------EECCCCC--------------------CCCEEEECCC
Q ss_conf             9999950776---------------------------------2112334--------------------6862530323
Q gi|254780214|r  161 AIPILQQHGR---------------------------------ISSLGFR--------------------FGNVAYCTDV  187 (271)
Q Consensus       161 i~~~~~~Hg~---------------------------------~~~~Gyr--------------------i~~~~Y~~Dt  187 (271)
                      +.++++.|..                                 ....|+.                    ..++.|++|+
T Consensus       133 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  212 (320)
T 1y44_A          133 VTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDT  212 (320)
T ss_dssp             EEEEECBSSSSBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSC
T ss_pred             EEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEECCCCCCCEECCCCC
T ss_conf             76541013555334330102567752254576508997521532156547998401374120002002478510015744


Q ss_pred             CCCHHHHHHHHCCHHEEEEECCCCCC------CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC---HHHHHH---HCCC
Q ss_conf             30016788862221102530233576------88757999999999972997799976888988---889998---6799
Q gi|254780214|r  188 NAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLD---YDMVLK---STPS  255 (271)
Q Consensus       188 ~~~~e~~~~~l~~~D~lI~d~l~~~~------~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~---~~~~~~---~~~~  255 (271)
                      . +.+.+..+++++|+|++|++....      .++|++++||++++++++||+++|||+|++.+   .+++.+   +...
T Consensus       213 ~-~~~~~~~~~~~~d~li~e~~~~~~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~~~~~~~e~~~~~~  291 (320)
T 1y44_A          213 R-VSDKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP  291 (320)
T ss_dssp             B-CCHHHHHHTTTCSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCS
T ss_pred             C-CCHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             2-237788751475033221010003454212579999999999999859998999897846688419999999998789


Q ss_pred             CCEEEEECCEEEEEC
Q ss_conf             819902044899626
Q gi|254780214|r  256 RVVPAFDGMQFSSPI  270 (271)
Q Consensus       256 ~v~~A~DGm~i~l~~  270 (271)
                      |+++|||||+|+||-
T Consensus       292 ~v~~a~Dg~~i~i~~  306 (320)
T 1y44_A          292 NSVAAYDFLEVNVPR  306 (320)
T ss_dssp             SEEECCTTCEEECCC
T ss_pred             CEEECCCCCEEEECC
T ss_conf             979865897899899