HHsearch results for GI: 254780214 and protein with PDBid: 2i7t_A
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.77 E-value=7.3e-19 Score=135.53 Aligned_cols=179 Identities=15% Similarity=0.098 Sum_probs=102.5
Q ss_pred CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCC--CHHH-----HHHHCCCC
Q ss_conf 8725999985417896513378878777787677444306999933677897189998798--4156-----67522334
Q gi|254780214|r 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--DFYM-----QVLREQVL 74 (271)
Q Consensus 2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~--d~r~-----ql~~~~i~ 74 (271)
++.|++++||-+.. +| +++.+|+. ++.+||||||. +... .+.....+
T Consensus 9 ~~~~~i~~LGG~~e-----iG----------------~sc~lv~~-----~~~~illDcG~~~~~~~~~~~p~~~~~~~~ 62 (459)
T 2i7t_A 9 SDQLLIRPLGAGQE-----VG----------------RSCIILEF-----KGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62 (459)
T ss_dssp CEEEEEEEEESSSS-----SS----------------SCEEEEEE-----TTEEEEECCCCCTTSCGGGGSCCGGGSCGG
T ss_pred CCEEEEEECCCCCC-----CC----------------CCEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98499998268986-----45----------------68999998-----992999958899886520026776667822
Q ss_pred CCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC----CC-CCCCCC
Q ss_conf 2059999743524220111024333178211101311202321002222101366775310012321----12-344333
Q gi|254780214|r 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI----VI-ENNDVP 149 (271)
Q Consensus 75 ~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~----~~-~~~~~~ 149 (271)
+||+|||||+|.||++|||.|.. ..+.+.|||+++.|.+.+.................+..... .+ .....+
T Consensus 63 ~idai~lTH~H~DH~g~Lp~l~~---~~~~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 139 (459)
T 2i7t_A 63 EIDLLLISHFHLDHCGALPWFLQ---KTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETIN 139 (459)
T ss_dssp GCCEEECCCSSHHHHTTHHHHHH---HSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEEC
T ss_pred CCCEEEECCCHHHHHCCHHHHHH---HCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEC
T ss_conf 29999989785887692799998---648999888315279999988898775410343235677999997762458707
Q ss_pred CCEECCCCCEEEEEEEEECCCEECCCCCCC----CEEEECCCCCCHHHHHHH----HCCHHEEEEECCC
Q ss_conf 420115874899999950776211233468----625303233001678886----2221102530233
Q gi|254780214|r 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEK----LQNLDFLIIDALK 210 (271)
Q Consensus 150 ~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt~~~~e~~~~~----l~~~D~lI~d~l~ 210 (271)
.......+.++++++...|. ..+.+|+|+ +++|++|.+.-++..+.. ..++|+|+.|++.
T Consensus 140 ~~~~~~~~~~~i~~~~agH~-~g~~~~~i~~~~~~i~ytGD~~~~~~~~l~~~~~~~~~~D~Li~est~ 207 (459)
T 2i7t_A 140 FHEVKEVAGIKFWCYHAGHV-LGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTY 207 (459)
T ss_dssp TTCCEEETTEEEEEEECCSS-TTCEEEEEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTT
T ss_pred CCCEEEECCEEEEEEECCCC-CCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
T ss_conf 99568608759999844776-785799999899988855886777864445655677665589995677