HHsearch results for GI: 254780214 and protein with PDBid: 2i7t_A

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.77  E-value=7.3e-19  Score=135.53  Aligned_cols=179  Identities=15%  Similarity=0.098  Sum_probs=102.5

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCC--CHHH-----HHHHCCCC
Q ss_conf             8725999985417896513378878777787677444306999933677897189998798--4156-----67522334
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--DFYM-----QVLREQVL   74 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~--d~r~-----ql~~~~i~   74 (271)
                      ++.|++++||-+..     +|                +++.+|+.     ++.+||||||.  +...     .+.....+
T Consensus         9 ~~~~~i~~LGG~~e-----iG----------------~sc~lv~~-----~~~~illDcG~~~~~~~~~~~p~~~~~~~~   62 (459)
T 2i7t_A            9 SDQLLIRPLGAGQE-----VG----------------RSCIILEF-----KGRKIMLDCGIHPGLEGMDALPYIDLIDPA   62 (459)
T ss_dssp             CEEEEEEEEESSSS-----SS----------------SCEEEEEE-----TTEEEEECCCCCTTSCGGGGSCCGGGSCGG
T ss_pred             CCEEEEEECCCCCC-----CC----------------CCEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             98499998268986-----45----------------68999998-----992999958899886520026776667822


Q ss_pred             CCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC----CC-CCCCCC
Q ss_conf             2059999743524220111024333178211101311202321002222101366775310012321----12-344333
Q gi|254780214|r   75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI----VI-ENNDVP  149 (271)
Q Consensus        75 ~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~----~~-~~~~~~  149 (271)
                      +||+|||||+|.||++|||.|..   ..+.+.|||+++.|.+.+.................+.....    .+ .....+
T Consensus        63 ~idai~lTH~H~DH~g~Lp~l~~---~~~~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  139 (459)
T 2i7t_A           63 EIDLLLISHFHLDHCGALPWFLQ---KTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETIN  139 (459)
T ss_dssp             GCCEEECCCSSHHHHTTHHHHHH---HSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEEC
T ss_pred             CCCEEEECCCHHHHHCCHHHHHH---HCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEC
T ss_conf             29999989785887692799998---648999888315279999988898775410343235677999997762458707


Q ss_pred             CCEECCCCCEEEEEEEEECCCEECCCCCCC----CEEEECCCCCCHHHHHHH----HCCHHEEEEECCC
Q ss_conf             420115874899999950776211233468----625303233001678886----2221102530233
Q gi|254780214|r  150 ICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEK----LQNLDFLIIDALK  210 (271)
Q Consensus       150 ~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt~~~~e~~~~~----l~~~D~lI~d~l~  210 (271)
                      .......+.++++++...|. ..+.+|+|+    +++|++|.+.-++..+..    ..++|+|+.|++.
T Consensus       140 ~~~~~~~~~~~i~~~~agH~-~g~~~~~i~~~~~~i~ytGD~~~~~~~~l~~~~~~~~~~D~Li~est~  207 (459)
T 2i7t_A          140 FHEVKEVAGIKFWCYHAGHV-LGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTY  207 (459)
T ss_dssp             TTCCEEETTEEEEEEECCSS-TTCEEEEEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTT
T ss_pred             CCCEEEECCEEEEEEECCCC-CCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
T ss_conf             99568608759999844776-785799999899988855886777864445655677665589995677