HHsearch results for GI: 254780214 and protein with PDBid: 2i7x_A

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.55  E-value=4e-15  Score=112.30  Aligned_cols=179  Identities=13%  Similarity=0.070  Sum_probs=95.3

Q ss_pred             EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC----HHHHH---HHCCCCCCC
Q ss_conf             59999854178965133788787777876774443069999336778971899987984----15667---522334205
Q gi|254780214|r    5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----FYMQV---LREQVLSID   77 (271)
Q Consensus         5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d----~r~ql---~~~~i~~Id   77 (271)
                      |..+|..|.+..|.+                    ++.+|+.     ++.+||+|||-+    ...+.   +..-+.+||
T Consensus         1 ~~~~~~~~~~g~~~~--------------------~c~lL~~-----d~~~ILlDcG~~~~~~~~~~~~~~~~~~~~~ID   55 (717)
T 2i7x_A            1 MTYKYNCCDDGSGTT--------------------VGSVVRF-----DNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEID   55 (717)
T ss_dssp             CCEEEEECCSSSSSC--------------------CCEEEEE-----TTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCC
T ss_pred             CEEEEEEECCCCCCC--------------------EEEEEEE-----CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             917999814899730--------------------3899998-----997999989988776774450022112656587


Q ss_pred             EEEEECCCHHHHHHCCHHHH-HHHCCCCEEEEEECCEEEEEECCCCCCCCC--CCCCCCCCCCCCCC-------CCCCCC
Q ss_conf             99997435242201110243-331782111013112023210022221013--66775310012321-------123443
Q gi|254780214|r   78 AVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFESFRYCFK--ALDDRTYPPIVNPI-------VIENND  147 (271)
Q Consensus        78 ~I~iTH~H~DHi~Gl~~Lr~-~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~--~~~~~~~~~~~~~~-------~~~~~~  147 (271)
                      +|||||+|.||+++||.|-. +....+...|||+++.|.+..+-...-.+.  ........+.....       .+....
T Consensus        56 aVllSHah~DH~GaLP~L~~~~~~~~g~~~pIYaT~pt~~L~~~~l~D~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~l~  135 (717)
T 2i7x_A           56 VIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLK  135 (717)
T ss_dssp             EEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEEC
T ss_pred             EEEECCCCHHHHCCHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEC
T ss_conf             89977898677546689998513236988889966899999999999999975311655566789999999985048947


Q ss_pred             CCCCEEC--CCCCEEEEEEEEECCCEECCCCCC----CCEEEECCCCCCHHHHH-------------HHHCCHHEEEEEC
Q ss_conf             3342011--587489999995077621123346----86253032330016788-------------8622211025302
Q gi|254780214|r  148 VPICMKS--AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESL-------------EKLQNLDFLIIDA  208 (271)
Q Consensus       148 ~~~~~~~--~~~~i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~~~~e~~~-------------~~l~~~D~lI~d~  208 (271)
                      +......  ...+++++++..-|- ..+..+.|    ++++|++|.+...+..+             +.+...++||.++
T Consensus       136 Y~q~~~l~~~~~gl~it~~~AGH~-LGsa~~~I~~~~~~IvytgD~n~~~~~~L~ga~~~~~~~~~~~~l~~~~~li~~t  214 (717)
T 2i7x_A          136 YSQLVDLRSRYDGLTLLAYNAGVC-PGGSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTL  214 (717)
T ss_dssp             TTCCEEETTTTTTEEEEEEECSSS-TTCEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECC
T ss_pred             CCCEEECCCCCCCEEEEEEECCCC-CCCEEEEEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf             998598037888579999655632-3426999982995999963678888730047533455788643356787899807


Q ss_pred             C
Q ss_conf             3
Q gi|254780214|r  209 L  209 (271)
Q Consensus       209 l  209 (271)
                      .
T Consensus       215 ~  215 (717)
T 2i7x_A          215 D  215 (717)
T ss_dssp             S
T ss_pred             C
T ss_conf             7