HHsearch results for GI: 254780214 and protein with PDBid: 2vw8_A
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.74 E-value=1.6e-08 Score=71.20 Aligned_cols=65 Identities=18% Similarity=0.147 Sum_probs=43.2
Q ss_pred CCEEEEEECCCCH-----HHHHHHC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC
Q ss_conf 9718999879841-----5667522--3342059999743524220111024333178211101311202321002
Q gi|254780214|r 52 SNTTVIVDTGPDF-----YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 (271)
Q Consensus 52 ~~~~iLiD~G~d~-----r~ql~~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~ 120 (271)
++..+|||||..- ..++.+. +.++|++|++||.|.||++|+..|+. .....+||+++.+.+.+.+
T Consensus 33 ~~~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~----~~p~~~v~~~~~~~~~~~~ 104 (303)
T 2vw8_A 33 EASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCP----RLPNVQVLASERTCQAWKS 104 (303)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGG----GCTTCEEEEEHHHHHHTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHH----CCCCCEEEECHHHHHHHHC
T ss_conf 98689995989852999999999828982427989959099865086345542----1678669944889998736