HHsearch results for GI: 254780214 and protein with PDBid: 3hnn_A

>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=98.64  E-value=2.1e-08  Score=70.55  Aligned_cols=169  Identities=14%  Similarity=0.145  Sum_probs=79.9

Q ss_pred             CEEEEEECCCCH-HHHHH---H--CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC
Q ss_conf             718999879841-56675---2--23342059999743524220111024333178211101311202321002222101
Q gi|254780214|r   53 NTTVIVDTGPDF-YMQVL---R--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF  126 (271)
Q Consensus        53 ~~~iLiD~G~d~-r~ql~---~--~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f  126 (271)
                      +..+|||+|..- ..+++   +  .+.++|++|++||.|.||++|+..+..    .....++|+++...+.+.+.+..  
T Consensus        51 d~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~----~~p~~~v~~~~~~~~~l~~~~~~--  124 (262)
T 3hnn_A           51 DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLE----LAPQITFVCSLPAAGDLRAAFPD--  124 (262)
T ss_dssp             SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHH----HCTTCEEEECHHHHHHHHHHSSS--
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCEEEECHHHHHHHHHHHCC--
T ss_conf             999999189755799999999963784258899959977777622599997----44485799778999888765235--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEECC-CCCEEEEEEEEECCCEECCCCCC-CCEEEECCCCC--CHHHHHHHHCCHH
Q ss_conf             36677531001232112344333420115-87489999995077621123346-86253032330--0167888622211
Q gi|254780214|r  127 KALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLGFRF-GNVAYCTDVNA--FPAESLEKLQNLD  202 (271)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~Dt~~--~~e~~~~~l~~~D  202 (271)
                        ...       ....+..   ....... +..+...+....|......-|.- +++.+++|.-.  .+..... ....+
T Consensus       125 --~~~-------~~~~~~~---gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~-~~~~~  191 (262)
T 3hnn_A          125 --DNL-------NILPMRG---KETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVF-DDNWE  191 (262)
T ss_dssp             --SCC-------EEEECCS---SCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCE-ESCGG
T ss_pred             --CCC-------CCCEECC---CCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCC-CCCHH
T ss_conf             --664-------3220025---5147622782379996689998996299987888699666345677886550-67716


Q ss_pred             EEEEECCCC-C--CCCCCCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             025302335-7--6887579999999999729977999768
Q gi|254780214|r  203 FLIIDALKN-G--LHSSHFSLSESLKKIELINPKNAILTHM  240 (271)
Q Consensus       203 ~lI~d~l~~-~--~~~~H~~~~ea~~~~~~~~~k~~~LtHl  240 (271)
                      .+..+...+ .  -.+....+.++++.++++.++.++-.|=
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~sL~~l~~L~~~~I~PgHG  232 (262)
T 3hnn_A          192 SFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHG  232 (262)
T ss_dssp             GTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSS
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf             78999999999850524999999999987899899995798