HHsearch results for GI: 254780214 and protein with PDBid: 3hnn_A
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=98.64 E-value=2.1e-08 Score=70.55 Aligned_cols=169 Identities=14% Similarity=0.145 Sum_probs=79.9
Q ss_pred CEEEEEECCCCH-HHHHH---H--CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC
Q ss_conf 718999879841-56675---2--23342059999743524220111024333178211101311202321002222101
Q gi|254780214|r 53 NTTVIVDTGPDF-YMQVL---R--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 (271)
Q Consensus 53 ~~~iLiD~G~d~-r~ql~---~--~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f 126 (271)
+..+|||+|..- ..+++ + .+.++|++|++||.|.||++|+..+.. .....++|+++...+.+.+.+..
T Consensus 51 d~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~----~~p~~~v~~~~~~~~~l~~~~~~-- 124 (262)
T 3hnn_A 51 DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLE----LAPQITFVCSLPAAGDLRAAFPD-- 124 (262)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHH----HCTTCEEEECHHHHHHHHHHSSS--
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCEEEECHHHHHHHHHHHCC--
T ss_conf 999999189755799999999963784258899959977777622599997----44485799778999888765235--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECC-CCCEEEEEEEEECCCEECCCCCC-CCEEEECCCCC--CHHHHHHHHCCHH
Q ss_conf 36677531001232112344333420115-87489999995077621123346-86253032330--0167888622211
Q gi|254780214|r 127 KALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLGFRF-GNVAYCTDVNA--FPAESLEKLQNLD 202 (271)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~Dt~~--~~e~~~~~l~~~D 202 (271)
... ....+.. ....... +..+...+....|......-|.- +++.+++|.-. .+..... ....+
T Consensus 125 --~~~-------~~~~~~~---gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~-~~~~~ 191 (262)
T 3hnn_A 125 --DNL-------NILPMRG---KETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVF-DDNWE 191 (262)
T ss_dssp --SCC-------EEEECCS---SCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCE-ESCGG
T ss_pred --CCC-------CCCEECC---CCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCC-CCCHH
T ss_conf --664-------3220025---5147622782379996689998996299987888699666345677886550-67716
Q ss_pred EEEEECCCC-C--CCCCCCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf 025302335-7--6887579999999999729977999768
Q gi|254780214|r 203 FLIIDALKN-G--LHSSHFSLSESLKKIELINPKNAILTHM 240 (271)
Q Consensus 203 ~lI~d~l~~-~--~~~~H~~~~ea~~~~~~~~~k~~~LtHl 240 (271)
.+..+...+ . -.+....+.++++.++++.++.++-.|=
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~sL~~l~~L~~~~I~PgHG 232 (262)
T 3hnn_A 192 SFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHG 232 (262)
T ss_dssp GTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSS
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 78999999999850524999999999987899899995798