Query         gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 271
No_of_seqs    173 out of 2320
Neff          8.4 
Searched_HMMs 23785
Date          Mon May 23 22:54:02 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780214.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3md7_A Beta-lactamase-like; ss 100.0       0       0  386.6  23.0  268    2-270    26-293 (293)
  2 3jxp_A Coenzyme PQQ synthesis  100.0       0       0  377.3  13.6  253    4-270     2-307 (321)
  3 3g1p_A Protein PHNP; C-P lyase 100.0       0       0  367.1  13.3  240    1-268     1-251 (258)
  4 2cbn_A Ribonuclease Z; phospho 100.0 3.9E-44       0  292.6  16.8  236    4-268     1-306 (306)
  5 1zkp_A Hypothetical protein BA 100.0 2.8E-41 1.4E-45  274.9  18.1  227    2-267    22-267 (268)
  6 1y44_A Ribonuclease Z; zinc-de 100.0 1.5E-40 5.6E-45  270.4  17.8  237    5-270     1-306 (320)
  7 2e7y_A TRNAse Z; tRNA maturati 100.0 1.1E-29 4.4E-34  202.9  13.1  217   40-268    11-280 (280)
  8 3h3e_A Uncharacterized protein 100.0 1.4E-28   6E-33  195.9  11.6  235    4-269    12-266 (267)
  9 2az4_A Hypothetical protein EF  99.8 1.8E-20 7.8E-25  145.4  10.9  202    4-244     6-265 (429)
 10 2p4z_A Metal-dependent hydrola  99.8 2.9E-20 1.2E-24  144.2   7.2  212   39-268    33-284 (284)
 11 3bk2_A RNAse J, metal dependen  99.8 5.3E-19 2.2E-23  136.4  10.1  222    2-264    14-273 (562)
 12 2wyl_A L-ascorbate-6-phosphate  99.8 1.1E-18 4.8E-23  134.3  11.2  191   40-242    46-284 (360)
 13 2i7t_A Cleavage and polyadenyl  99.8 7.3E-19 3.1E-23  135.5   8.4  179    2-210     9-207 (459)
 14 3bv6_A Metal-dependent hydrola  99.8 2.7E-18 1.1E-22  132.0  10.9  180   40-242    70-309 (379)
 15 3kl7_A Putative metal-dependen  99.7 5.2E-17 2.2E-21  124.0  14.0  173   40-254    38-223 (235)
 16 3af5_A Putative uncharacterize  99.7 3.7E-17 1.6E-21  124.9   6.7  180    2-212   186-397 (651)
 17 2xr1_A Cleavage and polyadenyl  99.7 3.6E-17 1.5E-21  125.0   5.2  175    2-210   181-383 (640)
 18 2i7x_A Protein CFT2; polyadeny  99.6   4E-15 1.7E-19  112.3   6.1  179    5-209     1-215 (717)
 19 1vjn_A Zn-dependent hydrolase   99.5 4.7E-13   2E-17   99.4  13.8  154    4-242    12-176 (220)
 20 3adr_A Putative uncharacterize  99.5 2.4E-14   1E-18  107.5   5.3  194   23-242     3-210 (261)
 21 2bib_A CBPE, teichoic acid pho  99.5 6.7E-14 2.8E-18  104.7   6.8   83    2-115     3-113 (547)
 22 1ztc_A Hypothetical protein TM  99.4 6.2E-13 2.6E-17   98.6   9.0   76    3-95     11-93  (221)
 23 1sml_A Protein (penicillinase)  99.2   1E-10 4.3E-15   84.9   8.0   71   40-120    39-116 (269)
 24 2gmn_A Metallo-beta-lactamase;  99.0   5E-10 2.1E-14   80.6   7.3   72   40-121    36-114 (274)
 25 1p9e_A Methyl parathion hydrol  98.9   5E-10 2.1E-14   80.6   3.9   45   51-95    104-159 (331)
 26 3esh_A Protein similar to meta  98.9 1.1E-09 4.7E-14   78.4   5.5   50   41-95     50-120 (280)
 27 2xf4_A Hydroxyacylglutathione   98.9   1E-09 4.4E-14   78.6   5.2  124   52-187    23-152 (210)
 28 1k07_A FEZ-1 beta-lactamase; m  98.9 1.9E-09 7.8E-14   77.1   6.3   72   40-121    26-104 (263)
 29 2zo4_A Metallo-beta-lactamase   98.9 1.3E-08 5.6E-13   71.7   9.9   59   51-115    29-96  (317)
 30 2q9u_A A-type flavoprotein; fl  98.9 1.4E-09 5.7E-14   77.9   4.3  117   53-187    49-172 (414)
 31 1vme_A Flavoprotein; TM0755, s  98.8   2E-09 8.4E-14   76.8   4.5  122   41-187    54-181 (410)
 32 1e5d_A Rubredoxin\:oxygen oxid  98.8 2.1E-09 8.7E-14   76.8   4.0   65   53-121    43-113 (402)
 33 2ohh_A Type A flavoprotein FPR  98.8 3.3E-09 1.4E-13   75.5   4.1   66   52-121    43-117 (404)
 34 1ycg_A Nitric oxide reductase;  98.8 2.7E-09 1.1E-13   76.1   3.5   64   53-120    44-113 (398)
 35 3dha_A N-acyl homoserine lacto  98.8 1.6E-08 6.7E-13   71.2   6.8   94    4-116     7-133 (254)
 36 2vw8_A PA1000, PQSE; quinolone  98.7 1.6E-08 6.8E-13   71.2   6.6   65   52-120    33-104 (303)
 37 2r2d_A AGR_PTI_140P, Zn-depend  98.7 2.4E-08   1E-12   70.2   6.4   63   40-115    44-135 (276)
 38 3hnn_A Putative diflavin flavo  98.6 2.1E-08 8.7E-13   70.5   4.7  169   53-240    51-232 (262)
 39 3l6n_A Metallo-beta-lactamase;  98.6 2.1E-08 8.6E-13   70.6   4.1   63   52-120    39-107 (219)
 40 2zwr_A Metallo-beta-lactamase   98.6 3.7E-08 1.6E-12   69.0   5.0   66   41-116    15-82  (207)
 41 1a7t_A Metallo-beta-lactamase;  98.6 4.5E-08 1.9E-12   68.4   4.7   69   41-120    39-113 (232)
 42 3iog_A Beta-lactamase; hydrola  98.6 1.9E-08 8.1E-13   70.7   2.7   65   51-121    30-100 (227)
 43 2qed_A Hydroxyacylglutathione   98.6 7.3E-08 3.1E-12   67.1   5.4  107   52-187    28-135 (258)
 44 1xm8_A Glyoxalase II; structur  98.5 1.8E-07 7.6E-12   64.7   7.2  117   40-187    13-132 (254)
 45 2p18_A Glyoxalase II; metallop  98.5 1.7E-07 7.3E-12   64.8   7.0   47   52-98     50-107 (311)
 46 2yz3_A Metallo-beta-lactamase;  98.5 9.5E-08   4E-12   66.4   5.4   63   52-120    77-145 (266)
 47 1qh5_A Glyoxalase II, protein   98.5   3E-07 1.2E-11   63.3   7.4   55   40-97     13-68  (260)
 48 2whg_A VIM-4 metallo-beta-lact  98.5 6.6E-08 2.8E-12   67.4   4.0   63   52-120    46-114 (230)
 49 2gcu_A Putative hydroxyacylglu  98.5 2.5E-07 1.1E-11   63.8   6.6  106   51-187    26-143 (245)
 50 1m2x_A Class B carbapenemase B  98.4   1E-07 4.4E-12   66.2   3.8   69   41-120    29-103 (223)
 51 1jjt_A IMP-1 metallo beta-lact  98.4   2E-07 8.4E-12   64.4   4.2   64   52-121    41-109 (228)
 52 2cfu_A SDSA1; SDS-hydrolase, l  98.3 6.5E-07 2.7E-11   61.2   5.6   68   51-118   130-204 (658)
 53 2fhx_A SPM-1; metallo-beta-lac  98.2 8.9E-07 3.7E-11   60.4   3.8   62   52-119    39-106 (246)
 54 1mqo_A Beta-lactamase II; alph  98.1 2.6E-06 1.1E-10   57.5   4.1   66   40-116    42-113 (227)
 55 2p97_A Hypothetical protein; p  97.5 0.00014   6E-09   46.7   5.9  104   52-188    32-139 (201)
 56 2az4_A Hypothetical protein EF  85.0    0.36 1.5E-05   25.5   2.1   50  215-268   380-429 (429)
 57 2kkn_A Uncharacterized protein  59.5     7.9 0.00033   17.2   6.2   10   73-82     48-57  (178)
 58 1ilo_A Conserved hypothetical   52.6     5.2 0.00022   18.3   1.7   11    4-14      1-11  (77)
 59 2ahr_A Putative pyrroline carb  42.1     7.1  0.0003   17.5   1.1   13    2-14      1-13  (259)
 60 3gtx_A Organophosphorus hydrol  39.4      16 0.00069   15.2   4.3   45  220-264   199-245 (339)
 61 3cky_A 2-hydroxymethyl glutara  30.9      10 0.00044   16.5   0.5   20    1-21      1-20  (301)
 62 2hl0_A Threonyl-tRNA synthetas  30.6      23 0.00096   14.3   4.2   26  220-245    61-89  (143)
 63 3llm_A ATP-dependent RNA helic  29.8      23 0.00099   14.3   3.1   68  180-254   157-228 (235)
 64 1s6y_A 6-phospho-beta-glucosid  28.5      17 0.00073   15.1   1.3   20    1-21      4-23  (450)
 65 3hn2_A 2-dehydropantoate 2-red  27.1      15 0.00061   15.5   0.7   14    1-16      1-14  (312)
 66 2rcy_A Pyrroline carboxylate r  24.8      19 0.00078   14.9   0.9   12    3-14      3-14  (262)
 67 3ego_A Probable 2-dehydropanto  24.6      19 0.00079   14.9   0.9   14    1-16      1-14  (307)
 68 2azn_A HTP reductase, putative  23.9      30  0.0013   13.6   2.9   21  217-237   128-148 (219)
 69 1fmt_A Methionyl-tRNA FMet for  22.3      31  0.0013   13.5   1.6   19    2-21      1-19  (314)
 70 3gza_A Putative alpha-L-fucosi  22.2      32  0.0014   13.4   4.5   27  217-243   293-320 (443)
 71 2qyt_A 2-dehydropantoate 2-red  21.4      25  0.0011   14.1   1.0   16    1-16      4-20  (317)

No 1  
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, seattle structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus}
Probab=100.00  E-value=0  Score=386.55  Aligned_cols=268  Identities=51%  Similarity=0.935  Sum_probs=215.4

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEE
Q ss_conf             87259999854178965133788787777876774443069999336778971899987984156675223342059999
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY   81 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~i   81 (271)
                      .+.|||||||||+|+|+|+++|+|++|++++++|+|+|+|++|+.....+++.+||||||+|+|.|+++.++++||+|||
T Consensus        26 ~~~Mkit~LGTG~~~g~P~~~c~c~~C~~a~~~~~R~~~S~li~~~~~~~~~~~iLiD~G~~~~~~~~~~~~~~id~I~l  105 (293)
T 3md7_A           26 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRMQMIDSGVHMLDAAVY  105 (293)
T ss_dssp             CSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHHHHHHHHTCCCCSEEEC
T ss_pred             CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEE
T ss_conf             78039999987689870569999874765578886633479998546789975899968813799986423456778998


Q ss_pred             ECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEE
Q ss_conf             74352422011102433317821110131120232100222210136677531001232112344333420115874899
Q gi|254780214|r   82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA  161 (271)
Q Consensus        82 TH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i  161 (271)
                      ||+|+||+.||+.|+...+....+++++++..........+.+................. ................+.+
T Consensus       106 TH~H~DH~~GL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  184 (293)
T 3md7_A          106 THPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMH-DIAPETPFSIEGAGGAIRF  184 (293)
T ss_dssp             SCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCCCCCEEEE-ECCTTCCEEECCTTCCEEE
T ss_pred             ECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCHHCCCCCCCCCCCCHHCC-CCCCCCCCEEECCCCEEEE
T ss_conf             446644455754544455404555313410011012202430011455433346410000-0246653101024651788


Q ss_pred             EEEEEECCCEECCCCCCCCEEEECCCCCCHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             99995077621123346862530323300167888622211025302335768875799999999997299779997688
Q gi|254780214|r  162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH  241 (271)
Q Consensus       162 ~~~~~~Hg~~~~~Gyri~~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~k~~~LtHls  241 (271)
                      .++.+.++...+..+.....+|..+.....+.....+.+++++..+.+....+++|+|++||++++++++|||++|||||
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~t~~ea~~l~~~~~~k~liLtHis  264 (293)
T 3md7_A          185 EPFSQVHGDIESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH  264 (293)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEECSCSBCCGGGHHHHTTCSEEEEECCCSSCBTTBCCHHHHHHHHHHHCCSEEEEESBC
T ss_pred             EEEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             76876247730444410211204753111102455543210011002367998998999999999997598989998999


Q ss_pred             CCCCHHHHHHHCCCCCEEEEECCEEEEEC
Q ss_conf             89888899986799819902044899626
Q gi|254780214|r  242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI  270 (271)
Q Consensus       242 ~~~~~~~~~~~~~~~v~~A~DGm~i~l~~  270 (271)
                      |+++++++.++++++|++|||||+|+|++
T Consensus       265 ~~~~~~~~~~~l~~~v~~A~DGM~i~l~~  293 (293)
T 3md7_A          265 VPLDYETVMRETPHHVEPGYDGLRFEVAV  293 (293)
T ss_dssp             TTCCHHHHHHHSCTTEEECCTTCEEEECC
T ss_pred             CCCCHHHHHHHCCCCEEEEECCEEEEEEC
T ss_conf             98799999965789819957895999879


No 2  
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida KT2440} PDB: 1xto_A
Probab=100.00  E-value=0  Score=377.26  Aligned_cols=253  Identities=18%  Similarity=0.202  Sum_probs=196.7

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCC----CCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHC--------
Q ss_conf             25999985417896513378878777787----677444306999933677897189998798415667522--------
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--------   71 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~----~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~--------   71 (271)
                      .|||+|||||+|+|+|++||+|++|++||    ++++|+++|++|...+    +.+||||||||++.|+.+.        
T Consensus         2 ~M~i~~LGtg~~~G~P~~~C~C~~C~~ar~~~~~~~~R~~ssi~l~~~g----~~~iLiD~G~~~~~ql~~~~~~~~~~~   77 (321)
T 3jxp_A            2 MMYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDG----VHWILCNASPDIRAQLQAFAPMQPARA   77 (321)
T ss_dssp             CEEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSS----SSEEEECCCTTHHHHHHTCGGGCCCSS
T ss_pred             EEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECC----CEEEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf             6999999880589704588888546032147887776432479999799----859999799759999999765483334


Q ss_pred             -CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -3342059999743524220111024333178211101311202321002222101366775310012321123443334
Q gi|254780214|r   72 -QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI  150 (271)
Q Consensus        72 -~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~  150 (271)
                       ++++||+|||||+|+||+.||++|+     ...++++|+++.+.+.+...+++..........   .....+...  ..
T Consensus        78 i~~~~Id~I~lTH~H~DH~~GL~~L~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~  147 (321)
T 3jxp_A           78 LRDTGINAIVLLDSQIDHTTGLLSLR-----EGCPHQVWCTDMVHQDLTTGFPLFNMLSHWNGG---LQWNRIELE--GS  147 (321)
T ss_dssp             SSCCSEEEEECSCCCHHHHGGGGGGG-----GGCCEEEEECHHHHHHTTTTSCHHHHHTTTTTC---EEEEECCSS--SC
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHH-----HHCEEEEEECHHHHHHHHHCCCHHHCCCCCCCC---CCEEEEECC--CC
T ss_conf             67887558997077612476799996-----122023760666744444152021101334676---411355046--66


Q ss_pred             CEECCCCCEEEEEEEEECCCE------------ECCCCCCC------CEEEECCCCCCHHHHHHHHCCHHEEEEECCCCC
Q ss_conf             201158748999999507762------------11233468------625303233001678886222110253023357
Q gi|254780214|r  151 CMKSAGGVIEAIPILQQHGRI------------SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG  212 (271)
Q Consensus       151 ~~~~~~~~i~i~~~~~~Hg~~------------~~~Gyri~------~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~  212 (271)
                      ........++++|++++|+..            +++||+|.      +++|++||..++++++++++++|++|+||+...
T Consensus       148 ~~~~~~~~~~i~~~~~~h~~~~~~~~~~~~~~~~~~g~~i~~~~~g~~~~y~~Dt~~~~~~~~~~~~~adlli~e~~~~~  227 (321)
T 3jxp_A          148 FVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWE  227 (321)
T ss_dssp             EECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCHHHHHHHHHCSEEEEECCCSS
T ss_pred             CCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCC
T ss_conf             21024698368666533578413345624777733699998504786799978886301677754215767999850257


Q ss_pred             -----------------CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC-----CHHHHHHHCCCCCEEEEECCEEEEEC
Q ss_conf             -----------------68875799999999997299779997688898-----88899986799819902044899626
Q gi|254780214|r  213 -----------------LHSSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSSPI  270 (271)
Q Consensus       213 -----------------~~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~-----~~~~~~~~~~~~v~~A~DGm~i~l~~  270 (271)
                                       .|++|++++||+++++++++||++||||||..     +.++.++..+.+|++|||||+|+|+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~H~~Hst~~eal~~~~~~~~k~lvLtH~sh~~p~~~~~~~~~~~~~~~gv~vA~DGm~i~L~e  307 (321)
T 3jxp_A          228 DDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRRGVEVAFDGMSIELLE  307 (321)
T ss_dssp             TTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTCGGGSTTCHHHHHHHHTTEEECCTTCEEEEC-
T ss_pred             CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEECCCCCEEEEEC
T ss_conf             14432135554443447878889999999999858998499996799984657497999977637949871799999932


No 3  
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli}
Probab=100.00  E-value=0  Score=367.07  Aligned_cols=240  Identities=25%  Similarity=0.366  Sum_probs=193.7

Q ss_pred             CCCEEEEEEEEECCCCCEECCCCCCCCCCCC--CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCE
Q ss_conf             9872599998541789651337887877778--76774443069999336778971899987984156675223342059
Q gi|254780214|r    1 MKDYYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDA   78 (271)
Q Consensus         1 m~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~--~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~   78 (271)
                      |+  |||||||||+|+|+|+++|+|++|.++  .++++|+++|++|+.     ++.+||||||.  +.|+.+.++++||+
T Consensus         1 m~--m~i~~LGtG~~~g~P~~~c~c~~c~~~~~~~~~~R~~ss~li~~-----~~~~iLiD~G~--~~~~~~~~~~~id~   71 (258)
T 3g1p_A            1 MS--LTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGL--HDLADRWSPGSFQQ   71 (258)
T ss_dssp             -C--EEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEE-----TTEEEEECCCC--TTHHHHCCTTSSCE
T ss_pred             CE--EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE-----CCEEEEEECCH--HHHHHCCCCCCCCE
T ss_conf             90--79999934178884667887874633334877664134999998-----99789998999--99986689858879


Q ss_pred             EEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf             99974352422011102433317821110131120232100222210136677531001232112344333420115874
Q gi|254780214|r   79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV  158 (271)
Q Consensus        79 I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (271)
                      |||||.|.||+.||+.++   +..+++++||+++.+... .+.+    +......     ....++     .......++
T Consensus        72 I~iTH~H~DH~~GL~~l~---~~~~~~i~iy~~~~~~~~-~~~~----~~~~~~~-----~~~~~~-----~~~~~~~~~  133 (258)
T 3g1p_A           72 FLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPDEQGC-DDLF----KHPGLLD-----FSHTVE-----PFVVFDLQG  133 (258)
T ss_dssp             EECSCCCHHHHGGGTTTT---TCSSSCEEEEECCCSSCS-TTTT----TSCTTEE-----EEEECC-----TTCCEEETT
T ss_pred             EEEECCCCCCCCCHHHHH---HHCCCCCCEEECCCCCCH-HHHH----CCCCCCC-----CCCCCC-----CCEEEECCC
T ss_conf             998167410244624554---422578538954411202-2442----2566543-----212356-----636885052


Q ss_pred             EEEEEEEEECCCEECCCCCC----CCEEEECCCCCCHHHHHHHHC--CHHEEEEECCCC---CCCCCCCCHHHHHHHHHH
Q ss_conf             89999995077621123346----862530323300167888622--211025302335---768875799999999997
Q gi|254780214|r  159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKN---GLHSSHFSLSESLKKIEL  229 (271)
Q Consensus       159 i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~~~~e~~~~~l~--~~D~lI~d~l~~---~~~~~H~~~~ea~~~~~~  229 (271)
                      +++++++++|+. .++||+|    ++++|++|+..++++.++.++  ++|+|++||+..   ..+++|++++|+++++++
T Consensus       134 ~~i~~~~~~H~~-~~~g~~i~~~~~~i~y~gDt~~~~~~~~~~l~~~~~d~li~d~~~~~~~~~~~~H~~~~ea~~~~~~  212 (258)
T 3g1p_A          134 LQVTPLPLNHSK-LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQV  212 (258)
T ss_dssp             EEEEEEECCSSS-CCEEEEEECSSCEEEEECSCSSCCHHHHHHHHHTCCSEEEEECCBSSCSSCCSSSCBHHHHHHHHHH
T ss_pred             EEEECCCCCCCC-CCEEEEEECCCEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             441313247898-7549999629826998486788898999996189988999548776223799999899999999997


Q ss_pred             CCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEECCEEEE
Q ss_conf             299779997688898888999867998199020448996
Q gi|254780214|r  230 INPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS  268 (271)
Q Consensus       230 ~~~k~~~LtHls~~~~~~~~~~~~~~~v~~A~DGm~i~l  268 (271)
                      +++||++||||+++++++++++.++++|++|||||+|++
T Consensus       213 ~~~k~~vl~H~s~~~~~~~~~~~l~~~v~~A~DGm~i~v  251 (258)
T 3g1p_A          213 IRSPRVILTHISHQFDAWLMENALPSGFEVGFDGMEIGV  251 (258)
T ss_dssp             HCCSCEEEESCCHHHHHHHTTCCCCTTEEECCTTEEEC-
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHCCCCCEEECCCCEEEE
T ss_conf             198989998889988989999656498489628959999


No 4  
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=100.00  E-value=3.9e-44  Score=292.56  Aligned_cols=236  Identities=18%  Similarity=0.216  Sum_probs=167.9

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCC--CCCCEEEE
Q ss_conf             2599998541789651337887877778767744430699993367789718999879841566752233--42059999
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLY   81 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i--~~Id~I~i   81 (271)
                      .|||+|||||++  +|..              .|..||++|+..... ++.+||||||++++.||.+.++  ++||+|||
T Consensus         1 ~M~l~~LGtg~~--~p~~--------------~r~~s~~lv~~~~~~-~~~~iL~DcG~g~~~~l~~~~~~~~~i~~Ifi   63 (306)
T 2cbn_A            1 AMNLIFLGTSAG--VPTR--------------TRNVTAILLNLQHPT-QSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFI   63 (306)
T ss_dssp             CCEEEEEECBSS--SCCS--------------SCCBCEEEEECCCSS-CCCEEEECCCTTHHHHHHTSCCCTTTEEEEEC
T ss_pred             CCEEEEECCCCC--CCCC--------------CCCCCEEEEEEECCC-CCCEEEEECCHHHHHHHHHHCCCHHHCCEEEE
T ss_conf             928999776899--8999--------------996488999972688-99489999975899999981899667758998


Q ss_pred             ECCCHHHHHHCCHHHH--HHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCE
Q ss_conf             7435242201110243--33178211101311202321002222101366775310012321123443334201158748
Q gi|254780214|r   82 THPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI  159 (271)
Q Consensus        82 TH~H~DHi~Gl~~Lr~--~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  159 (271)
                      ||.|+||+.||+.|..  +...+.+|+.||+|++..+.++..+....... .         ..++..+.........+.+
T Consensus        64 TH~H~DH~~Gl~~ll~~~~~~~~~~~l~i~gP~~~~~~l~~~~~~~~~~~-~---------~~~~~~e~~~~~~~~~~~~  133 (306)
T 2cbn_A           64 SHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWT-D---------YPLEIVEIGAGEILDDGLR  133 (306)
T ss_dssp             SCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCC-S---------SCEEEEECCSEEEEECSSE
T ss_pred             ECCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-C---------CCCEEEECCCCCEEECCCE
T ss_conf             34668980784013310120378987656686778999999986532444-4---------4412332135411203752


Q ss_pred             EEEEEEEECCCEECCCCCC------------------------------------------------------CCEEEEC
Q ss_conf             9999995077621123346------------------------------------------------------8625303
Q gi|254780214|r  160 EAIPILQQHGRISSLGFRF------------------------------------------------------GNVAYCT  185 (271)
Q Consensus       160 ~i~~~~~~Hg~~~~~Gyri------------------------------------------------------~~~~Y~~  185 (271)
                      .+.+.+..| ..++.||++                                                      .+++|++
T Consensus       134 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~sg  212 (306)
T 2cbn_A          134 KVTAYPLEH-PLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFG  212 (306)
T ss_dssp             EEEEEECBS-SSCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECC
T ss_pred             EEEEEECCC-CCCCCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC
T ss_conf             565430355-5443220122025666420767876089972145540578559996312124300234345786456526


Q ss_pred             CCCCCHHHHHHHHCCHHEEEEECCCCCCC------CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHH------HHHC
Q ss_conf             23300167888622211025302335768------87579999999999729977999768889888899------9867
Q gi|254780214|r  186 DVNAFPAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV------LKST  253 (271)
Q Consensus       186 Dt~~~~e~~~~~l~~~D~lI~d~l~~~~~------~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~~~~~------~~~~  253 (271)
                      ||.. ++++.++++++|+||+||+.....      ++|+|++||++++++++||+++|||+|+..+.+++      .++.
T Consensus       213 Dt~~-~~~l~~~~~~~d~LIhE~t~~~~~~~~a~~~~Hst~~~a~~~a~~~~~k~lvLtH~s~ry~~~~~~~~~~e~~~~  291 (306)
T 2cbn_A          213 DTGP-CDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSI  291 (306)
T ss_dssp             SCBS-CSTHHHHHTTCSEEEEECCBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTT
T ss_pred             CCCC-CHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             6676-645655431564577733335244515467899999999999998499989998988577964599999999987


Q ss_pred             CCCCEEEEECCEEEE
Q ss_conf             998199020448996
Q gi|254780214|r  254 PSRVVPAFDGMQFSS  268 (271)
Q Consensus       254 ~~~v~~A~DGm~i~l  268 (271)
                      ..|+.+|+|||+|+|
T Consensus       292 ~~~~~~a~D~~~i~i  306 (306)
T 2cbn_A          292 FPATELANDFTVFNV  306 (306)
T ss_dssp             CSCEEECCTTCEEEC
T ss_pred             CCCEEECCCCCEEEC
T ss_conf             899399379989979


No 5  
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=100.00  E-value=2.8e-41  Score=274.85  Aligned_cols=227  Identities=18%  Similarity=0.183  Sum_probs=170.8

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHC-CCCCCCEEE
Q ss_conf             8725999985417896513378878777787677444306999933677897189998798415667522-334205999
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVL   80 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~-~i~~Id~I~   80 (271)
                      +..||||+||||++  +|.++              |..||.+|+.     ++.+||||||++++.|+.+. ++++||+||
T Consensus        22 ~~~m~~~~lG~~~~--~~~~~--------------~~~S~~Li~~-----~~~~iLiD~G~g~~~~l~~~~~~~~id~I~   80 (268)
T 1zkp_A           22 SNAMKMTVVGFWGG--FPEAG--------------EATSGYLFEH-----DGFRLLVDCGSGVLAQLQKYITPSDIDAVV   80 (268)
T ss_dssp             SSCEEEEEEECBSS--SCCTT--------------CCBSEEEEEE-----TTEEEEECCCTTHHHHHTTTCCGGGCCEEE
T ss_pred             CCCCEEEEEECCCC--CCCCC--------------CCCCEEEEEE-----CCCEEEEECCHHHHHHHHHCCCHHHCCEEE
T ss_conf             89778999924899--59999--------------9646799999-----992899959767999998549852497999


Q ss_pred             EECCCHHHHHHCCHHHHHH------HCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf             9743524220111024333------1782111013112023210022221013667753100123211234433342011
Q gi|254780214|r   81 YTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS  154 (271)
Q Consensus        81 iTH~H~DHi~Gl~~Lr~~~------~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (271)
                      |||.|.||++||+.|+...      .....++++|+++.+.+.+.+...    .       +......+     ......
T Consensus        81 iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~----~-------~~~~~~~~-----~~~~~~  144 (268)
T 1zkp_A           81 LSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTH----E-------PHTKGIPY-----NPEETL  144 (268)
T ss_dssp             CSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTCB----T-------TTEEEEEC-----CTTSCE
T ss_pred             EECCCHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHH----H-------CCCCEEEC-----CCCCEE
T ss_conf             9279603333448887654202333356774458833667889987654----2-------25533770-----687559


Q ss_pred             CCCCEEEEEEEEECCCEECCCCCCC----CEEEECCCCCCHHHHHHHHCCHHEEEEECCCCC----CCCCCCCHHHHHHH
Q ss_conf             5874899999950776211233468----625303233001678886222110253023357----68875799999999
Q gi|254780214|r  155 AGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKK  226 (271)
Q Consensus       155 ~~~~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~----~~~~H~~~~ea~~~  226 (271)
                      ..++++++++++.|+ .+++||+|.    +++|++|+.. .++..++++++|+||+||....    ...+|++++|++++
T Consensus       145 ~ig~~~v~~~~~~H~-~~~~g~~i~~~~~~i~ysgDt~~-~~~~~~~~~~~Dlli~e~~~~~~~~~~~~~H~~~~ea~~l  222 (268)
T 1zkp_A          145 QIGPFSISFLKTVHP-VTCFAMRITAGNDIVVYSADSSY-IPEFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASI  222 (268)
T ss_dssp             EETTEEEEEEECCSS-SCCEEEEEEETTEEEEECCSCCC-CTTHHHHHTTCSEEEEECCBCTTSCCGGGTCCBHHHHHHH
T ss_pred             EEEEEEEEEECCCCC-CCCCEEEEECCCCEEEECCCCCC-CCHHHHHHCCCCEEEEECCCCCCHHCCCCCCCCHHHHHHH
T ss_conf             841289974037777-87413477427977998888998-8146665335768999778873000266668999999999


Q ss_pred             HHHCCCCEEEEECCCCCCCHHH----HHHHCCCCCEEEEECCEEE
Q ss_conf             9972997799976888988889----9986799819902044899
Q gi|254780214|r  227 IELINPKNAILTHMHVDLDYDM----VLKSTPSRVVPAFDGMQFS  267 (271)
Q Consensus       227 ~~~~~~k~~~LtHls~~~~~~~----~~~~~~~~v~~A~DGm~i~  267 (271)
                      ++++++|+++|||+++..+.++    +++.++.+|.+|+|||+++
T Consensus       223 ~~~~~~k~lvl~H~~~~~~~~~~~~~~~~~~~~~V~~A~DG~~~d  267 (268)
T 1zkp_A          223 AKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWN  267 (268)
T ss_dssp             HHHTTCSEEEEESBCSSSCTHHHHHHHHTTCCSEEEECCTTCEEE
T ss_pred             HHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEE
T ss_conf             998197989998979879999999999986699899933998863


No 6  
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=100.00  E-value=1.5e-40  Score=270.41  Aligned_cols=237  Identities=19%  Similarity=0.231  Sum_probs=158.5

Q ss_pred             EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCC--CCCCEEEEE
Q ss_conf             599998541789651337887877778767744430699993367789718999879841566752233--420599997
Q gi|254780214|r    5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYT   82 (271)
Q Consensus         5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i--~~Id~I~iT   82 (271)
                      |||+|||||++  +|.+              .|..+|.++....  .++.+||||||+|++.||++.++  ++||+||||
T Consensus         1 Mkv~~LGtg~~--~p~~--------------~r~~s~~~v~~~~--~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~I~iT   62 (320)
T 1y44_A            1 MELLFLGTGAG--IPAK--------------ARNVTSVALKLLE--ERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFIT   62 (320)
T ss_dssp             CEEEEEECBSS--SCCS--------------SCCBCEEEEEETT--TTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECS
T ss_pred             CEEEEEEECCC--CCCC--------------CCCCCEEEEEEEE--CCCCEEEEECCHHHHHHHHHCCCCHHHCCEEEEC
T ss_conf             98999977899--7999--------------9976889999980--6994899949779999999839996676689972


Q ss_pred             CCCHHHHHHCCHHHH--HHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEE
Q ss_conf             435242201110243--331782111013112023210022221013667753100123211234433342011587489
Q gi|254780214|r   83 HPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE  160 (271)
Q Consensus        83 H~H~DHi~Gl~~Lr~--~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  160 (271)
                      |.|+||+.|++.+..  +......++++|+|+.+.+.+...+.+...........          .+.............
T Consensus        63 H~H~DH~~Gl~~~~~~~~~~~~~~~~~iy~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~~~~~~~~~  132 (320)
T 1y44_A           63 HMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAI----------QEIEEGIVFEDDQFI  132 (320)
T ss_dssp             BCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEE----------EECCSEEEEECSSEE
T ss_pred             CCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE----------EECCCCCEEECCCEE
T ss_conf             4456651671355555553167765423477017889987665320255665312----------552677401046325


Q ss_pred             EEEEEEECCC---------------------------------EECCCCC--------------------CCCEEEECCC
Q ss_conf             9999950776---------------------------------2112334--------------------6862530323
Q gi|254780214|r  161 AIPILQQHGR---------------------------------ISSLGFR--------------------FGNVAYCTDV  187 (271)
Q Consensus       161 i~~~~~~Hg~---------------------------------~~~~Gyr--------------------i~~~~Y~~Dt  187 (271)
                      +.++++.|..                                 ....|+.                    ..++.|++|+
T Consensus       133 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  212 (320)
T 1y44_A          133 VTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDT  212 (320)
T ss_dssp             EEEEECBSSSSBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSC
T ss_pred             EEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEECCCCCCCEECCCCC
T ss_conf             76541013555334330102567752254576508997521532156547998401374120002002478510015744


Q ss_pred             CCCHHHHHHHHCCHHEEEEECCCCCC------CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC---HHHHHH---HCCC
Q ss_conf             30016788862221102530233576------88757999999999972997799976888988---889998---6799
Q gi|254780214|r  188 NAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLD---YDMVLK---STPS  255 (271)
Q Consensus       188 ~~~~e~~~~~l~~~D~lI~d~l~~~~------~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~---~~~~~~---~~~~  255 (271)
                      . +.+.+..+++++|+|++|++....      .++|++++||++++++++||+++|||+|++.+   .+++.+   +...
T Consensus       213 ~-~~~~~~~~~~~~d~li~e~~~~~~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~~~~~~~e~~~~~~  291 (320)
T 1y44_A          213 R-VSDKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP  291 (320)
T ss_dssp             B-CCHHHHHHTTTCSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCS
T ss_pred             C-CCHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             2-237788751475033221010003454212579999999999999859998999897846688419999999998789


Q ss_pred             CCEEEEECCEEEEEC
Q ss_conf             819902044899626
Q gi|254780214|r  256 RVVPAFDGMQFSSPI  270 (271)
Q Consensus       256 ~v~~A~DGm~i~l~~  270 (271)
                      |+++|||||+|+||-
T Consensus       292 ~v~~a~Dg~~i~i~~  306 (320)
T 1y44_A          292 NSVAAYDFLEVNVPR  306 (320)
T ss_dssp             SEEECCTTCEEECCC
T ss_pred             CEEECCCCCEEEECC
T ss_conf             979865897899899


No 7  
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.96  E-value=1.1e-29  Score=202.90  Aligned_cols=217  Identities=18%  Similarity=0.210  Sum_probs=139.8

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHH----HHHCCCCEEEEEECCEEE
Q ss_conf             0699993367789718999879841566752233420599997435242201110243----331782111013112023
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG----YFLKQKRPIDVYAAPDCM  115 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~----~~~~~~~~i~vy~~~~~~  115 (271)
                      .|.++...     +.+||||||++++.|| +..+.+||+|||||.|+||++||+.|..    ....+..++.+++|+.+.
T Consensus        11 ~~t~~~~~-----~~~iLiD~G~g~~~~l-~~~~~~i~~IfiTH~H~DHi~gl~~l~~~~~~~~~~~~~~l~~~~p~~~~   84 (280)
T 2e7y_A           11 FSTWIYYS-----PERILFDAGEGVSTTL-GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR   84 (280)
T ss_dssp             TEEEEEEG-----GGTEEEEECTTHHHHH-GGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH
T ss_pred             CEEEEEEC-----CCEEEEECCHHHHHHH-CCCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCEEEECCHHHH
T ss_conf             37999989-----9879998974499985-55522387899917863564679999998743103788761450544689


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCC-EECCCCCC----------------
Q ss_conf             2100222210136677531001232112344333420115874899999950776-21123346----------------
Q gi|254780214|r  116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRF----------------  178 (271)
Q Consensus       116 ~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~-~~~~Gyri----------------  178 (271)
                      .. .+....+..........  .....+...............+++.++++.|.. ..+++|++                
T Consensus        85 ~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (280)
T 2e7y_A           85 AV-EEYTEFIKRANPDLRFS--FNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDS  161 (280)
T ss_dssp             HH-HHHHHHHHHHCGGGTTT--EEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGGTTCCH
T ss_pred             HH-HHHHHHHHHCCCCCCCC--CCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHCCCCC
T ss_conf             99-99998753003444554--2101123554034203666633799886213567664046650245432122235774


Q ss_pred             ---------------------CCEEEECCCCCCHHHHHHHHCCHHEEEEECCCCC----CCCCCCCHHHHHHHHHHCCCC
Q ss_conf             ---------------------8625303233001678886222110253023357----688757999999999972997
Q gi|254780214|r  179 ---------------------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIELINPK  233 (271)
Q Consensus       179 ---------------------~~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~----~~~~H~~~~ea~~~~~~~~~k  233 (271)
                                           .+++|++|+.. ++.  ++++++|+||+||....    ..++|+|++|+++++++++||
T Consensus       162 ~~i~~~~~~~g~~~~~~~~~~~~~~~~gD~~~-~~~--~~~~~~d~li~E~~~~~~~~~~~~~Hst~~~~~~~a~~~~vk  238 (280)
T 2e7y_A          162 KEISRLVKEKGRDFVTEEYHKKVLTISGDSLA-LDP--EEIRGTELLIHECTFLDARDRRYKNHAAIDEVMESVKAAGVK  238 (280)
T ss_dssp             HHHHHHHHHHCTGGGEEEEEEEEEEECCSCSS-CCH--HHHTTCSCEEEECCBC--------CCCBHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHCCCCCEEEECCCCCCCCCCCCCCC-CCH--HHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCCC
T ss_conf             10000111056303420125761233687777-886--782788789997464334554116998999999999976999


Q ss_pred             EEEEECCCCCCC------HHHHHHHCCCC-CEEEEECCEEEE
Q ss_conf             799976888988------88999867998-199020448996
Q gi|254780214|r  234 NAILTHMHVDLD------YDMVLKSTPSR-VVPAFDGMQFSS  268 (271)
Q Consensus       234 ~~~LtHls~~~~------~~~~~~~~~~~-v~~A~DGm~i~l  268 (271)
                      +++|||+|++..      ..++++++|+. +.++.||..+++
T Consensus       239 ~lil~H~s~ry~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  280 (280)
T 2e7y_A          239 KVILYHISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVFEM  280 (280)
T ss_dssp             EEEEESCCGGGHHHHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEC
T ss_conf             999992680238669999999998789988998899986859


No 8  
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.96  E-value=1.4e-28  Score=195.87  Aligned_cols=235  Identities=14%  Similarity=0.097  Sum_probs=136.1

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC--HHHHHHHCCCCCCCEEEE
Q ss_conf             259999854178965133788787777876774443069999336778971899987984--156675223342059999
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLY   81 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d--~r~ql~~~~i~~Id~I~i   81 (271)
                      .||||+|+.+.+.  +.+.             .+-..|++|+         +||||||++  +..++.+.++..+|+|||
T Consensus        12 ~m~i~~l~~~~~~--~~~~-------------~e~G~s~~ie---------~iL~D~G~~~~~~~n~~~lgId~~daV~l   67 (267)
T 3h3e_A           12 HMRIHVLCDDSSQ--NGFE-------------SEHGFSVLVD---------SVLFDTGKSDVFLKNARKLGIDLPKDVLI   67 (267)
T ss_dssp             CEEEEEEECSCCC--TTCC-------------CCSSCEEEET---------TEEECCCSSSHHHHHHHHTTCCCCSEEEC
T ss_pred             CEEEEEEECCCCC--CCCC-------------CCCEEEEEEC---------CEEEECCCCHHHHHHHHHCCCCHHHCEEE
T ss_conf             2799999779999--8751-------------4622554445---------28997999979999999849984684898


Q ss_pred             ECCCHHHHHHCCHHHHHH--HCCCCEEEEEECCEEEEEEC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf             743524220111024333--17821110131120232100-----22221013667753100123211234433342011
Q gi|254780214|r   82 THPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLF-----ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS  154 (271)
Q Consensus        82 TH~H~DHi~Gl~~Lr~~~--~~~~~~i~vy~~~~~~~~l~-----~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (271)
                      ||.|+||++||++|+...  .......++|.+........     ..+.+.....   ...  .........+.+.....
T Consensus        68 TH~H~DH~gGl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~i~~~~~~  142 (267)
T 3h3e_A           68 SHGHYDHAGGLLYLSGKRVWLRKEALDQKYSGERYAGADWNEVLYYNTGKFVIER---ITE--IGKNMFLLGPANLRGKV  142 (267)
T ss_dssp             SCSCHHHHGGGGGCCSCEEEEEGGGGSEEEETTEECCCCHHHHHHHSEEEEECSS---EEE--EETTEEEECSCCCTTCC
T ss_pred             ECCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC---CCC--CCCCCEECCCCCCCCCC
T ss_conf             1455311078899987655306565654343432247641466763235300246---411--14784231651345523


Q ss_pred             CCCCEEEE-----EEEEECCCEECCCCCCC-CEEEECCCCC-----CHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHH
Q ss_conf             58748999-----99950776211233468-6253032330-----0167888622211025302335768875799999
Q gi|254780214|r  155 AGGVIEAI-----PILQQHGRISSLGFRFG-NVAYCTDVNA-----FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES  223 (271)
Q Consensus       155 ~~~~i~i~-----~~~~~Hg~~~~~Gyri~-~~~Y~~Dt~~-----~~e~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea  223 (271)
                      ......+.     .....+ ....+++..+ ..++.+++..     +.++ ...+.+.+++.+.+....++.+|.+++++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~v~g~~h~~~~~h~~~~~~  220 (267)
T 3h3e_A          143 PTGDFFVERNGERRKDLFE-DEQTLVVRTKEGLVVITGCSHRGIDNILLD-IAETFNERIKMVVGGFHLLKSSDDEIEKI  220 (267)
T ss_dssp             CCSCEEEESSSCEEECCCT-TCCEEEEEETTEEEEEESCCTTCHHHHHHH-HHTTCSSCEEEEEEECCCTTSCHHHHHHH
T ss_pred             CCCCCEEECCCCEECCCCC-CEEEEEEEECCCEEEEEECCCCCHHHHHHH-HHHHCCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf             2687235438816424644-416899960683699851126523403999-99972996489953675799987789999


Q ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEECCEEEEE
Q ss_conf             9999972997799976888988889998679981990204489962
Q gi|254780214|r  224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP  269 (271)
Q Consensus       224 ~~~~~~~~~k~~~LtHls~~~~~~~~~~~~~~~v~~A~DGm~i~l~  269 (271)
                      ++++++++||++++||++++.++++++++++.+|.+|||||+|++-
T Consensus       221 ~~~l~~~~~k~i~l~H~t~~~~~~~l~~~~~~~v~~a~dG~~iei~  266 (267)
T 3h3e_A          221 VKAFNELGVETVVPCHCTGERAVDIFKREFLGKIMDCYAGLKLEVS  266 (267)
T ss_dssp             HHHHHHTTCCEEEEETTSCHHHHHHHHHHCSSEECCCCTTCEEEEC
T ss_pred             HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCEEEEEC
T ss_conf             9999858998899989997599999997788986991388299828


No 9  
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Enterococcus faecalis V583} SCOP: d.157.1.10
Probab=99.84  E-value=1.8e-20  Score=145.45  Aligned_cols=202  Identities=14%  Similarity=0.189  Sum_probs=115.2

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHH----------H-----
Q ss_conf             2599998541789651337887877778767744430699993367789718999879841566----------7-----
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ----------V-----   68 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~q----------l-----   68 (271)
                      ..+|||||-+     -.+|+                ++++|+.     ++.+||||||..++..          +     
T Consensus         6 ~~~i~f~GG~-----~eiGg----------------~~~~i~~-----~~~~illD~G~~~~~~~~~~~~~~~~~~~~~~   59 (429)
T 2az4_A            6 KTTVTFHSGI-----LTIGG----------------TVIEVAY-----KDAHIFFDFGTEFRPELDLPDDHIETLINNRL   59 (429)
T ss_dssp             CEEEEEEECT-----TSSSC----------------CEEEEEE-----TTEEEEECCCCCCCTTCCCSCCCHHHHHHTTS
T ss_pred             CEEEEEECCC-----CCCCC----------------CEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCHHCCCCCCC
T ss_conf             4699992799-----85588----------------3899999-----99089994799977655675411000111234


Q ss_pred             ------------------HHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCC---CCCCC
Q ss_conf             ------------------522334205999974352422011102433317821110131120232100222---21013
Q gi|254780214|r   69 ------------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF---RYCFK  127 (271)
Q Consensus        69 ------------------~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~---~y~f~  127 (271)
                                        +..+..++|||||||+|.||++||+.|.       ..+|||+++.+...+....   .+...
T Consensus        60 ~p~~~~~~~~~~~~~~~~~~~~~~~i~ai~iTH~H~DH~g~l~~l~-------~~~piy~~~~t~~l~~~~~~~~~~~~~  132 (429)
T 2az4_A           60 VPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLD-------PAVPLYTLKETKMILNSLNRKGDFLIP  132 (429)
T ss_dssp             SCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSCHHHHTTGGGBC-------TTSCEEEEHHHHHHHHHHTTTSCSSCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHH-------HCCCEEECHHHHHHHHHHHHHHCCCCC
T ss_conf             6654333355421110012246566658998987172658525676-------169765279999999998764000123


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC----CCEEEECCCC---CCHHHH---HHH
Q ss_conf             667753100123211234433342011587489999995077621123346----8625303233---001678---886
Q gi|254780214|r  128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---AFPAES---LEK  197 (271)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~---~~~e~~---~~~  197 (271)
                      ..    ..  ......+.........+..++++++++++.|.-..++||+|    ++++|++|++   ...+..   .+.
T Consensus       133 ~~----~~--~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~Hsi~gs~~~~i~~~~~~i~ytGD~~~~~~~~~~~~~~~~~  206 (429)
T 2az4_A          133 SP----FE--EKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEK  206 (429)
T ss_dssp             CT----TS--CTTCCCCCEEECTTCEEEETTEEEEEEECCCSSTTCEEEEEEETTEEEEECCSCCSSSTTHHHHHHHHHH
T ss_pred             CH----HH--HCCCCCEEEEECCCCEEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEECCCEEECCCCCCCHHHHHHH
T ss_conf             40----22--2155431599589996997777999985667888754899824674588546513158876411556666


Q ss_pred             HCCHHEEEEECCCCC-------CCCC-CCCHHHHHHHHHHC---CC-CEEEEECCCCCC
Q ss_conf             222110253023357-------6887-57999999999972---99-779997688898
Q gi|254780214|r  198 LQNLDFLIIDALKNG-------LHSS-HFSLSESLKKIELI---NP-KNAILTHMHVDL  244 (271)
Q Consensus       198 l~~~D~lI~d~l~~~-------~~~~-H~~~~ea~~~~~~~---~~-k~~~LtHls~~~  244 (271)
                      .+++|+||+|++...       ..+. ..+-++.++.+.+.   ++ +++++.-++.++
T Consensus       207 ~~~~d~Li~E~T~~~~~~~~~~~~~~~~~se~~v~~~i~~~~~~~~~~~Vii~~~a~~~  265 (429)
T 2az4_A          207 AKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPANV  265 (429)
T ss_dssp             HTTCSEEEEECCGGGSCCCCCCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEECTTCH
T ss_pred             HCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHH
T ss_conf             21402330102210246656775556554289999999999985666615423113019


No 10 
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; 2.10A {Thermoanaerobacter tengcongensis MB4}
Probab=99.81  E-value=2.9e-20  Score=144.19  Aligned_cols=212  Identities=17%  Similarity=0.128  Sum_probs=106.1

Q ss_pred             CCEEEEEECCCCCCCEEEEEECCCC--HHHHHHHCCC--CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE
Q ss_conf             3069999336778971899987984--1566752233--42059999743524220111024333178211101311202
Q gi|254780214|r   39 RSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC  114 (271)
Q Consensus        39 ~~s~~i~~~~~~~~~~~iLiD~G~d--~r~ql~~~~i--~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~  114 (271)
                      ..|+||+.     ++.+||||||++  +..+|.+.++  ++||+||+||.|.||++||++++...    ...++|+++.+
T Consensus        33 G~S~LIe~-----~~~~iLID~G~~~~~~~~l~~~gi~~~~Id~I~iTH~H~DHigGL~~ll~~~----~~~~~~~~~~~  103 (284)
T 2p4z_A           33 GLSLLLKK-----GNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERN----PEVKIYTHKEI  103 (284)
T ss_dssp             SCEEEEEE-----TTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHC----TTCEEEEEGGG
T ss_pred             EEEEEEEE-----CCEEEEEECCCCHHHHHHHHHCCCCHHHCCEEEECCCCHHHCCCCHHHHHHC----CCCCCCCCHHH
T ss_conf             78999998-----9968999079997999999984999789989997464354317766788645----56654447656


Q ss_pred             EEEEC--C---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECC--------------------
Q ss_conf             32100--2---2221013667753100123211234433342011587489999995077--------------------
Q gi|254780214|r  115 MKHLF--E---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG--------------------  169 (271)
Q Consensus       115 ~~~l~--~---~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg--------------------  169 (271)
                      .....  .   .+.++...  ...+.....    .................+.+++..+.                    
T Consensus       104 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (284)
T 2p4z_A          104 LNKKYAMRKGGQFEEIGFD--LSFYEKYKN----NFVLIDKDAEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDK  177 (284)
T ss_dssp             GSCEEEECSSSCEEECSCC--HHHHHHHGG----GEEEESSCEEEETTEEEECSCCCCSCCHHHHTTEEEEETTEEEECC
T ss_pred             HHHHHCCCCCCCCCCCCCC--HHHHHHCCC----CCEEECCCCCCCCCCEEECCCCEEECCCCCCEEEEECCCCCEECCC
T ss_conf             5342101236641113533--333332145----4045247730148834744645453245453035651577374253


Q ss_pred             CEECCCCCC----CCEEEECCCCCCHHHHHH----HHCCHHEEEEECCCCCCCCCCCCH---HHHHHHHHHCCCCEEEEE
Q ss_conf             621123346----862530323300167888----622211025302335768875799---999999997299779997
Q gi|254780214|r  170 RISSLGFRF----GNVAYCTDVNAFPAESLE----KLQNLDFLIIDALKNGLHSSHFSL---SESLKKIELINPKNAILT  238 (271)
Q Consensus       170 ~~~~~Gyri----~~~~Y~~Dt~~~~e~~~~----~l~~~D~lI~d~l~~~~~~~H~~~---~ea~~~~~~~~~k~~~Lt  238 (271)
                      .....++.+    ....+++|.........+    ...+..++.+.+   ..|..|.+.   .++++..++.++|+++++
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~g---~~h~~~~~~~~~~~sl~~L~~~~~k~i~~~  254 (284)
T 2p4z_A          178 FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIG---GFHLRGMEEEKVKDIARKIEEYGVKKVLTG  254 (284)
T ss_dssp             CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEE---CCCCTTCCHHHHHHHHHHHHHTTBCCEEEC
T ss_pred             CCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC---CCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             36625899981787078961166247988764575348987789816---755789999999999999970899899998


Q ss_pred             CCCCCCCHHHHHHHCCCCCEEEEECCEEEE
Q ss_conf             688898888999867998199020448996
Q gi|254780214|r  239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS  268 (271)
Q Consensus       239 Hls~~~~~~~~~~~~~~~v~~A~DGm~i~l  268 (271)
                      |++....++.+++.++++|+.++|||+|.+
T Consensus       255 H~tg~~~~~~~~~~l~d~i~~~~~G~~i~~  284 (284)
T 2p4z_A          255 HCTGIDEYGFLKSVLKDKISYLTTSSSIVV  284 (284)
T ss_dssp             GGGCHHHHHHHHHHHGGGEEECCTTCEEEC
T ss_pred             CCCCHHHHHHHHHHCCCCEEEECCCCEEEC
T ss_conf             999749999999865367899589989979


No 11 
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A*
Probab=99.79  E-value=5.3e-19  Score=136.38  Aligned_cols=222  Identities=18%  Similarity=0.171  Sum_probs=125.5

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHH-------------HHH
Q ss_conf             8725999985417896513378878777787677444306999933677897189998798415-------------667
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY-------------MQV   68 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r-------------~ql   68 (271)
                      ++..+++.||-+.-     +|                +++.+++.     ++..||||||-.+.             ...
T Consensus        14 ~~~i~i~pLGG~~E-----IG----------------~n~~~~e~-----~~~~iliD~G~~f~~~~~~gid~iiPd~~~   67 (562)
T 3bk2_A           14 QDHVEIIPLGGMGE-----IG----------------KNITVFRF-----RDEIFVLDGGLAFPEEGMPGVDLLIPRVDY   67 (562)
T ss_dssp             CCCEEEEEEESBSB-----SS----------------CCEEEEEE-----TTEEEEECCCCBCCCTTSTTCCEEEECCHH
T ss_pred             CCEEEEEECCCCCH-----HH----------------HCEEEEEE-----CCEEEEEECCCCCCCCCCCCCCEEECCCHH
T ss_conf             88289996688890-----45----------------16799999-----995999958999897568897589369689


Q ss_pred             HHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             52233420599997435242201110243331782111013112023210022221013667753100123211234433
Q gi|254780214|r   69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV  148 (271)
Q Consensus        69 ~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~  148 (271)
                      +..+.++|+||||||+|.||+++||.|.+.....+.++|||+++.|.+.++.++...  ....    .......+.    
T Consensus        68 l~~~~~~i~ai~lTHaH~DH~Galp~Ll~~~~~~~~~~PIY~T~~T~~Ll~~kl~e~--~~~~----~~~~~~~i~----  137 (562)
T 3bk2_A           68 LIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEF--GLRP----GAFNLKEIS----  137 (562)
T ss_dssp             HHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHT--TCCS----TTSEEEEEC----
T ss_pred             HHHCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHC--CCCC----CCCCEEEEC----
T ss_conf             873766725999799855653772878875214568858887999999999999972--9985----555314736----


Q ss_pred             CCCEECC-CCCEEEEEEEEECCCEECCCCCC----CCEEEECCCCCC-------H--HHHHHHH--CCHHEEEEECCCCC
Q ss_conf             3420115-87489999995077621123346----862530323300-------1--6788862--22110253023357
Q gi|254780214|r  149 PICMKSA-GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF-------P--AESLEKL--QNLDFLIIDALKNG  212 (271)
Q Consensus       149 ~~~~~~~-~~~i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~~~-------~--e~~~~~l--~~~D~lI~d~l~~~  212 (271)
                       ...... +..++++++++.|.-..++||.|    ++++|++|.+.-       +  ...+..+  .++++|+.|++...
T Consensus       138 -~~~~~~~g~~f~v~~~~v~hsipga~~~~i~t~~g~IlyTGDfr~~~~~~~~~~~d~~~~~~~~~~~vl~l~~~st~~~  216 (562)
T 3bk2_A          138 -PDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAE  216 (562)
T ss_dssp             -TTCEEEETTTEEEEEEECCCSSSSCEEEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTT
T ss_pred             -CCCEEEEEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCC
T ss_conf             -9965998211899988536777764699998299789998255577777655656889985227778539976878889


Q ss_pred             CCCCCC----CHHH-HHHHHHHCCCCEEEEECCCCCCCHH----HHHHHCCCCCEEEEECC
Q ss_conf             688757----9999-9999997299779997688898888----99986799819902044
Q gi|254780214|r  213 LHSSHF----SLSE-SLKKIELINPKNAILTHMHVDLDYD----MVLKSTPSRVVPAFDGM  264 (271)
Q Consensus       213 ~~~~H~----~~~e-a~~~~~~~~~k~~~LtHls~~~~~~----~~~~~~~~~v~~A~DGm  264 (271)
                       ++.+.    .+.+ ..+..++ ...|++++-++.++.--    ++++.  .+..++++|.
T Consensus       217 -~~~~~~~E~~~~~~i~~~~~~-~~grvii~~fasni~Riq~i~~~a~~--~~r~v~~~g~  273 (562)
T 3bk2_A          217 -RPGYTPSEMEIAKELDRVIGR-APGRVFVTTFASHIHRIQSVIWAAEK--YGRKVAMEGR  273 (562)
T ss_dssp             -CCSCCCCHHHHHHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHH--TTCEEEEECH
T ss_pred             -CCCCCCCHHHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHH--HCCEEEECCC
T ss_conf             -899997889999999999985-79989999704058899999999998--4988985051


No 12 
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.78  E-value=1.1e-18  Score=134.31  Aligned_cols=191  Identities=18%  Similarity=0.145  Sum_probs=105.8

Q ss_pred             CEEEEEECCCCCCCEEEEEEC--CC--------CH--HHHHHH--------------------CCCCCCCEEEEECCCHH
Q ss_conf             069999336778971899987--98--------41--566752--------------------23342059999743524
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDT--GP--------DF--YMQVLR--------------------EQVLSIDAVLYTHPHAD   87 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~--G~--------d~--r~ql~~--------------------~~i~~Id~I~iTH~H~D   87 (271)
                      ++++|+..    ++.+||||.  |.        .+  ..|+.|                    +.+++||+||+||.|.|
T Consensus        46 s~~~i~~~----~g~~IliDP~ls~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~R~~p~~idp~~L~~IDaVLiTH~H~D  121 (360)
T 2wyl_A           46 TGIWLKSE----GGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHND  121 (360)
T ss_dssp             TEEEEECT----TCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSCTT
T ss_pred             CEEEEECC----CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCHH
T ss_conf             58999906----99199986887887776666555532111123554345775555789889688888889997999602


Q ss_pred             HHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEE
Q ss_conf             22011102433317821110131120232100222210136677531001232112344333420115874899999950
Q gi|254780214|r   88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ  167 (271)
Q Consensus        88 Hi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~  167 (271)
                      |+. ...++.........+++|+|.++.+.++...   +..   ............+................+...+..
T Consensus       122 Hld-~~~l~~~~~~~~~~~~~~gP~~~~~~l~~~g---~~~---~~i~~~~~g~~~~v~~~~i~~~~~~~~~~~~~~p~~  194 (360)
T 2wyl_A          122 HID-VNVAAAVMQNCADDVPFIGPKTCVDLWIGWG---VPK---ERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPAD  194 (360)
T ss_dssp             TCC-HHHHHHHHHHSCTTCCEEECHHHHHHHHHHT---CCG---GGEEECCTTCEEEETTEEEEEEECCCC---------
T ss_pred             HCC-CHHHHHHHHCCCCCCEEECCHHHHHHHHHCC---CCH---HHEEEECCCCEEEEECCEEEEEEEEEEEEEEECCCC
T ss_conf             178-0999999854767743865889999998669---965---515760578657740213577631455556642664


Q ss_pred             C---------CCEECCCCCCC----CEEEECCCCCCHHHHHHHHC--CHHEEEEECCCC-CCCCCCCCHHHHHHHHHHCC
Q ss_conf             7---------76211233468----62530323300167888622--211025302335-76887579999999999729
Q gi|254780214|r  168 H---------GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKN-GLHSSHFSLSESLKKIELIN  231 (271)
Q Consensus       168 H---------g~~~~~Gyri~----~~~Y~~Dt~~~~e~~~~~l~--~~D~lI~d~l~~-~~~~~H~~~~ea~~~~~~~~  231 (271)
                      |         ....++||+++    +++|++||.+. ++..+.++  ++|++++..... .....||+.+||++++++++
T Consensus       195 ~~~~~~~~~~~~~~~~g~~ie~~g~tIy~sGDT~~~-~~~~~~~~~~~iDvall~ig~~~~~~~~hmt~~eA~~~a~~l~  273 (360)
T 2wyl_A          195 QKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYS-NYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALN  273 (360)
T ss_dssp             ---------CCTTTBEEEEEEETTEEEEECTTCCCC-TTHHHHHHHSCCCEEEEEBCCCCTTCCCSBCHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC-HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             446665577787740489997199189992698866-8899985348985899658888888888889999999999729


Q ss_pred             CCEEEEECCCC
Q ss_conf             97799976888
Q gi|254780214|r  232 PKNAILTHMHV  242 (271)
Q Consensus       232 ~k~~~LtHls~  242 (271)
                      ||+++++|...
T Consensus       274 ~K~vIp~H~d~  284 (360)
T 2wyl_A          274 AKVVIPFHHDI  284 (360)
T ss_dssp             CSEEEEESTTT
T ss_pred             CCEEEEECCCC
T ss_conf             99999965667


No 13 
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.77  E-value=7.3e-19  Score=135.53  Aligned_cols=179  Identities=15%  Similarity=0.098  Sum_probs=102.5

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCC--CHHH-----HHHHCCCC
Q ss_conf             8725999985417896513378878777787677444306999933677897189998798--4156-----67522334
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--DFYM-----QVLREQVL   74 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~--d~r~-----ql~~~~i~   74 (271)
                      ++.|++++||-+..     +|                +++.+|+.     ++.+||||||.  +...     .+.....+
T Consensus         9 ~~~~~i~~LGG~~e-----iG----------------~sc~lv~~-----~~~~illDcG~~~~~~~~~~~p~~~~~~~~   62 (459)
T 2i7t_A            9 SDQLLIRPLGAGQE-----VG----------------RSCIILEF-----KGRKIMLDCGIHPGLEGMDALPYIDLIDPA   62 (459)
T ss_dssp             CEEEEEEEEESSSS-----SS----------------SCEEEEEE-----TTEEEEECCCCCTTSCGGGGSCCGGGSCGG
T ss_pred             CCEEEEEECCCCCC-----CC----------------CCEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             98499998268986-----45----------------68999998-----992999958899886520026776667822


Q ss_pred             CCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC----CC-CCCCCC
Q ss_conf             2059999743524220111024333178211101311202321002222101366775310012321----12-344333
Q gi|254780214|r   75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI----VI-ENNDVP  149 (271)
Q Consensus        75 ~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~----~~-~~~~~~  149 (271)
                      +||+|||||+|.||++|||.|..   ..+.+.|||+++.|.+.+.................+.....    .+ .....+
T Consensus        63 ~idai~lTH~H~DH~g~Lp~l~~---~~~~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  139 (459)
T 2i7t_A           63 EIDLLLISHFHLDHCGALPWFLQ---KTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETIN  139 (459)
T ss_dssp             GCCEEECCCSSHHHHTTHHHHHH---HSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEEC
T ss_pred             CCCEEEECCCHHHHHCCHHHHHH---HCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEC
T ss_conf             29999989785887692799998---648999888315279999988898775410343235677999997762458707


Q ss_pred             CCEECCCCCEEEEEEEEECCCEECCCCCCC----CEEEECCCCCCHHHHHHH----HCCHHEEEEECCC
Q ss_conf             420115874899999950776211233468----625303233001678886----2221102530233
Q gi|254780214|r  150 ICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEK----LQNLDFLIIDALK  210 (271)
Q Consensus       150 ~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt~~~~e~~~~~----l~~~D~lI~d~l~  210 (271)
                      .......+.++++++...|. ..+.+|+|+    +++|++|.+.-++..+..    ..++|+|+.|++.
T Consensus       140 ~~~~~~~~~~~i~~~~agH~-~g~~~~~i~~~~~~i~ytGD~~~~~~~~l~~~~~~~~~~D~Li~est~  207 (459)
T 2i7t_A          140 FHEVKEVAGIKFWCYHAGHV-LGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTY  207 (459)
T ss_dssp             TTCCEEETTEEEEEEECCSS-TTCEEEEEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTT
T ss_pred             CCCEEEECCEEEEEEECCCC-CCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
T ss_conf             99568608759999844776-785799999899988855886777864445655677665589995677


No 14 
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural genomics, PSI-2; 1.80A {Vibrio cholerae o1 biovar eltor str}
Probab=99.77  E-value=2.7e-18  Score=131.99  Aligned_cols=180  Identities=16%  Similarity=0.157  Sum_probs=112.7

Q ss_pred             CEEEEEECCCCCCCEEEEEEC--CCCH----------HHHHHH--------------------CCCCCCCEEEEECCCHH
Q ss_conf             069999336778971899987--9841----------566752--------------------23342059999743524
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDT--GPDF----------YMQVLR--------------------EQVLSIDAVLYTHPHAD   87 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~--G~d~----------r~ql~~--------------------~~i~~Id~I~iTH~H~D   87 (271)
                      +|++|+..    ++.+||||.  |.+.          +.|+.|                    +.+++||+||+||.|.|
T Consensus        70 ag~~i~~~----g~t~iliDp~~~~~~~~~~~~~~~~~~~~~r~~g~~~~~p~~R~~p~~idp~~L~~IDaVLITH~H~D  145 (379)
T 3bv6_A           70 TGIWLKSA----GNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHAD  145 (379)
T ss_dssp             TEEEEEET----TCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCSGG
T ss_pred             CEEEEEEC----CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCC
T ss_conf             68999978----97389989957888766554445642101102454446875455789889689799888998999711


Q ss_pred             HHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEE
Q ss_conf             22011102433317821110131120232100222210136677531001232112344333420115874899999950
Q gi|254780214|r   88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ  167 (271)
Q Consensus        88 Hi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~  167 (271)
                      |+ +...++......+..+++++|.++.+.+.+..           .+   ...   ..+...+.....++++++.++..
T Consensus       146 Hl-D~~tl~~i~~~~~~~~~~igP~~~~~~l~~~g-----------vp---~~~---ii~l~~gd~~~i~~i~I~~~pa~  207 (379)
T 3bv6_A          146 HI-DVNVAAAVLQNCGEHVKFIGPQACVDLWLGWG-----------VP---QER---CIVAKVGDVLEIGDVKIRVLDSF  207 (379)
T ss_dssp             GC-CHHHHHHHHHHSCTTCEEEECHHHHHHHHHHT-----------CC---GGG---EEECCTTCEEEETTEEEEEEECC
T ss_pred             CC-CHHHHHHHHHCCCCCEEEECCHHHHHHHHHCC-----------CC---HHH---EEEECCCCEEEECCEEEEEEEEE
T ss_conf             17-96999999850797459983789999998759-----------96---676---68814787289877799999435


Q ss_pred             CCCE---------------------ECCCCCCC----CEEEECCCCCCHHHHHHHHC--CHHEEEEECCCC-CCCCCCCC
Q ss_conf             7762---------------------11233468----62530323300167888622--211025302335-76887579
Q gi|254780214|r  168 HGRI---------------------SSLGFRFG----NVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKN-GLHSSHFS  219 (271)
Q Consensus       168 Hg~~---------------------~~~Gyri~----~~~Y~~Dt~~~~e~~~~~l~--~~D~lI~d~l~~-~~~~~H~~  219 (271)
                      |+..                     .+.||+|+    ++.|+|||.+. +...+..+  +.|+.++..-.+ .....||+
T Consensus       208 H~~~~~~~p~~~~~~~~~~~~~~~~~~~gylIe~~g~~Iy~sGDT~~~-~~~~~ig~~~~iDvall~iG~~~~~~~~hmt  286 (379)
T 3bv6_A          208 DRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYS-NYYAKHGNDYQIDVALLSYGENPRGVTDKMT  286 (379)
T ss_dssp             CHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCC-TTHHHHHHHSCCSEEEEEBCCCCTTCCCSBC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC-HHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
T ss_conf             365100147764446766666887653168897199389996799964-7899988647998999788888877766889


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             99999999972997799976888
Q gi|254780214|r  220 LSESLKKIELINPKNAILTHMHV  242 (271)
Q Consensus       220 ~~ea~~~~~~~~~k~~~LtHls~  242 (271)
                      .+||+++++.+++|.++.+|...
T Consensus       287 ~~eA~~aa~~l~~k~vIP~H~d~  309 (379)
T 3bv6_A          287 SSDVLRAAESLDCQVVVPFHHDI  309 (379)
T ss_dssp             HHHHHHHHHHHTCSEEEEESTTS
T ss_pred             HHHHHHHHHHCCCCEEEEECCCC
T ss_conf             99999999970999999966345


No 15 
>3kl7_A Putative metal-dependent hydrolase; structural genomics, joint center for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.74  E-value=5.2e-17  Score=124.00  Aligned_cols=173  Identities=17%  Similarity=0.233  Sum_probs=110.3

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEEC
Q ss_conf             06999933677897189998798415667522334205999974352422011102433317821110131120232100
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF  119 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~  119 (271)
                      +|++|+.     ++.+||||.-..   ......+.++|+||+||.|.||+. ...++..   .+...+|++++.+.+.+.
T Consensus        38 as~lie~-----~g~~ILiDP~~~---~~~~~~~p~iD~VLiTH~H~DH~~-~~~l~~~---~~~~~~vi~~~~~~~~l~  105 (235)
T 3kl7_A           38 GSLMLTY-----DNHSIQVDPVSE---YADYTTFPKADIILITHEHGDHLD-PKAIQAV---EKSDTEIIANENSQKKLG  105 (235)
T ss_dssp             TEEEEEE-----TTEEEEESCCTT---TCCTTSSCCCSEEEECCSSTTTCC-HHHHHHH---CCTTCEEEECHHHHHHHT
T ss_pred             CEEEEEE-----CCEEEEECCCCC---CCCHHCCCCCCEEEECCCCCCCCC-CHHHHHH---HCCCCEEEECHHHHHHHH
T ss_conf             5999998-----999999889999---886200898889997998701267-2201246---426966981589987751


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCE---------ECCCCCCC----CEEEECC
Q ss_conf             2222101366775310012321123443334201158748999999507762---------11233468----6253032
Q gi|254780214|r  120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI---------SSLGFRFG----NVAYCTD  186 (271)
Q Consensus       120 ~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~---------~~~Gyri~----~~~Y~~D  186 (271)
                      +..                   ....    .........++++.++..|...         ...||+++    ++.|+||
T Consensus       106 ~~~-------------------~~~~----~~~~~~~~~~~I~~~p~~h~~~~~~~~~~~~~~~gyvie~~g~~i~~~GD  162 (235)
T 3kl7_A          106 KGK-------------------VLKN----GDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGD  162 (235)
T ss_dssp             CSE-------------------ECCT----TCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCS
T ss_pred             HCC-------------------CCCC----CCCEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECC
T ss_conf             064-------------------2025----77327755720678973415787667678753377899979979999458


Q ss_pred             CCCCHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCC
Q ss_conf             33001678886222110253023357688757999999999972997799976888988889998679
Q gi|254780214|r  187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP  254 (271)
Q Consensus       187 t~~~~e~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~~~~~~~~~~  254 (271)
                      |..+++  ++.++++|++++..-    .+.||+.+||+++++.++||+++.+|.... +..++++.+.
T Consensus       163 t~~~~e--~~~~~~iDv~~lpig----~~~~m~~~~A~~~~~~l~pk~viP~H~~~~-~~~~~~~~~~  223 (235)
T 3kl7_A          163 TEDIPE--MKDLKDIDIAFLPVN----QPYTMTVSQAAKAARMFSPKILYPYHYGDT-KIGELKDALK  223 (235)
T ss_dssp             CCSCGG--GGGCCSCSEEEEECC----TTTSCCHHHHHHHHHHHCCSEEEEESCTTC-CTTHHHHHTT
T ss_pred             CCCHHH--HHHCCCCCEEEECCC----CCCCCCHHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHHHH
T ss_conf             677577--751269879997679----977579999999999729999999568998-8899999998


No 16 
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.68  E-value=3.7e-17  Score=124.89  Aligned_cols=180  Identities=21%  Similarity=0.180  Sum_probs=99.2

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHH--HH----------
Q ss_conf             872599998541789651337887877778767744430699993367789718999879841566--75----------
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ--VL----------   69 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~q--l~----------   69 (271)
                      ++.||+|+||...     .+|                +++.+|+.     ++.+||||||-.+...  -.          
T Consensus       186 ~~~vrit~LGG~~-----EIG----------------rs~~lv~~-----~~~~ILlDcG~~~~~~~~~~~~~p~~~~p~  239 (651)
T 3af5_A          186 SRWIRITGLGGFR-----EVG----------------RSALLVQT-----DESFVLVDFGVNVAMLNDPYKAFPHFDAPE  239 (651)
T ss_dssp             CSCEEEEEEECSS-----SSS----------------CCEEEEEE-----SSCEEEECCCCCGGGTTCHHHHSCCTTCHH
T ss_pred             CCCEEEEEECCCC-----CCC----------------CCEEEEEE-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9827999936888-----624----------------66799996-----796899989988565667311367767765


Q ss_pred             ---HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC-----
Q ss_conf             ---223342059999743524220111024333178211101311202321002222101366775310012321-----
Q gi|254780214|r   70 ---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI-----  141 (271)
Q Consensus        70 ---~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~-----  141 (271)
                         -...++||||||||+|.||+++||.|-   .......|||+++.|.+.+.....-..+........+.....     
T Consensus       240 ~~~l~~~~~idAVlITHaH~DHiG~LP~L~---~~g~~~~PIY~T~~T~~L~~~~~~d~~~i~~~~~~~~~y~~~di~~~  316 (651)
T 3af5_A          240 FQYVLREGLLDAIIITHAHLDHCGMLPYLF---RYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEV  316 (651)
T ss_dssp             HHHHHHTTCCCEEECSCSSHHHHTTHHHHH---HTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHH
T ss_pred             CCCCCCCCCCCEEEECCCCHHHHCCHHHHH---HHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf             212367565568997889878868688999---73788887766789999999999999998761167777899999999


Q ss_pred             --CCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC------CCEEEECCCCCCHHHHHH----HHCCHHEEEEECC
Q ss_conf             --1234433342011587489999995077621123346------862530323300167888----6222110253023
Q gi|254780214|r  142 --VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLE----KLQNLDFLIIDAL  209 (271)
Q Consensus       142 --~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri------~~~~Y~~Dt~~~~e~~~~----~l~~~D~lI~d~l  209 (271)
                        .+...+....... +.+++++++...|.. .+..+.+      ++++|++|.+.-+...++    ....+|.|++|++
T Consensus       317 ~~~~~~l~yge~~~i-~pd~~it~~~aGH~l-Gsa~~~i~i~~~~~~IvyTGDfk~~~~~ll~~a~~~~~rvd~Li~EsT  394 (651)
T 3af5_A          317 IKHTITLDYGEVRDI-SPDIRLTLHNAGHIL-GSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMEST  394 (651)
T ss_dssp             HHTEEECCTTCCEEE-ETTEEEEEEECSSST-TCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECT
T ss_pred             HHCCEEECCCCEEEE-CCCEEEEECCCCCCC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCEEEEEE
T ss_conf             854199579984980-798799865689887-030899995688668997778788877566876545123040023320


Q ss_pred             CCC
Q ss_conf             357
Q gi|254780214|r  210 KNG  212 (271)
Q Consensus       210 ~~~  212 (271)
                      .-.
T Consensus       395 yg~  397 (651)
T 3af5_A          395 YGG  397 (651)
T ss_dssp             TCS
T ss_pred             CCC
T ss_conf             267


No 17 
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.67  E-value=3.6e-17  Score=125.01  Aligned_cols=175  Identities=21%  Similarity=0.235  Sum_probs=99.8

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHH--H----H---HHCC
Q ss_conf             87259999854178965133788787777876774443069999336778971899987984156--6----7---5223
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM--Q----V---LREQ   72 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~--q----l---~~~~   72 (271)
                      ++..|+|+||-..-     +                .+++.+|+.     ++.+||+|||-.+..  +    .   .-..
T Consensus       181 ~~~irit~LGG~~E-----I----------------Grsc~lv~~-----~~~~ILlDcG~~~~~~~~~~~~~~~p~~~~  234 (640)
T 2xr1_A          181 DQWVRVTALGGCKE-----V----------------GRSCFLLST-----PESRILIDCGVNVGSDENMTPYLYVPEVFP  234 (640)
T ss_dssp             CCCCEEEEEECSSS-----S----------------BCCEEEEEC-----SSCEEEECCCCBCSSCSSCCCCTTSTTTCS
T ss_pred             CCEEEEEEECCCCC-----C----------------CCCEEEEEE-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             98089999478886-----1----------------527799996-----896999988888785233574435577687


Q ss_pred             CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCC-CCC---CCCCCCCCCCC------CCCCCC
Q ss_conf             34205999974352422011102433317821110131120232100222-210---13667753100------123211
Q gi|254780214|r   73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYC---FKALDDRTYPP------IVNPIV  142 (271)
Q Consensus        73 i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~-~y~---f~~~~~~~~~~------~~~~~~  142 (271)
                      +++||||||||+|.||+++|+.|    +..+...|||+++.|.+.+...+ +|.   .+......|..      ......
T Consensus       235 l~~iDAV~LTHaH~DH~G~Lp~L----~k~g~~~PIY~T~~T~~L~~~ll~d~~~~~~~~~~~~~y~~~~i~~~~~~~i~  310 (640)
T 2xr1_A          235 LNQIDAVIVTHAHLDHQGLVPLL----FKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIP  310 (640)
T ss_dssp             GGGCCEEECCSSCHHHHTTHHHH----HHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEE
T ss_pred             HHHCCEEEECCCCHHHHCCHHHH----HHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEE
T ss_conf             30188999888976763865999----85289988997779999999999999987664234688788999988850685


Q ss_pred             CCCCCCCCCEECCCCCEEEEEEEEECCCEECCC-CCCC----CEEEECCCCCCHHHHH----HHHCCHHEEEEECCC
Q ss_conf             234433342011587489999995077621123-3468----6253032330016788----862221102530233
Q gi|254780214|r  143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG----NVAYCTDVNAFPAESL----EKLQNLDFLIIDALK  210 (271)
Q Consensus       143 ~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~G-yri~----~~~Y~~Dt~~~~e~~~----~~l~~~D~lI~d~l~  210 (271)
                      ++..   ... .-+.+++++++.+.|....+.+ +.++    +++|++|.+.-....+    .....+|++|.+++.
T Consensus       311 l~y~---e~~-~i~~di~Vt~~~aGHslGsA~~~~~I~~g~~~IvyTGDfr~~~~~~l~~a~~~~~~~d~lIlesTy  383 (640)
T 2xr1_A          311 LDYE---EVT-DIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATY  383 (640)
T ss_dssp             CCTT---CCE-EEETTEEEEEEECSSSTTCEEEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTT
T ss_pred             CCCC---CEE-EECCCCEEEEEECCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHEECCC
T ss_conf             5899---769-957971799972687786500578995088269973785667675558654301221222100123


No 18 
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.55  E-value=4e-15  Score=112.30  Aligned_cols=179  Identities=13%  Similarity=0.070  Sum_probs=95.3

Q ss_pred             EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC----HHHHH---HHCCCCCCC
Q ss_conf             59999854178965133788787777876774443069999336778971899987984----15667---522334205
Q gi|254780214|r    5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----FYMQV---LREQVLSID   77 (271)
Q Consensus         5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d----~r~ql---~~~~i~~Id   77 (271)
                      |..+|..|.+..|.+                    ++.+|+.     ++.+||+|||-+    ...+.   +..-+.+||
T Consensus         1 ~~~~~~~~~~g~~~~--------------------~c~lL~~-----d~~~ILlDcG~~~~~~~~~~~~~~~~~~~~~ID   55 (717)
T 2i7x_A            1 MTYKYNCCDDGSGTT--------------------VGSVVRF-----DNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEID   55 (717)
T ss_dssp             CCEEEEECCSSSSSC--------------------CCEEEEE-----TTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCC
T ss_pred             CEEEEEEECCCCCCC--------------------EEEEEEE-----CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             917999814899730--------------------3899998-----997999989988776774450022112656587


Q ss_pred             EEEEECCCHHHHHHCCHHHH-HHHCCCCEEEEEECCEEEEEECCCCCCCCC--CCCCCCCCCCCCCC-------CCCCCC
Q ss_conf             99997435242201110243-331782111013112023210022221013--66775310012321-------123443
Q gi|254780214|r   78 AVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFESFRYCFK--ALDDRTYPPIVNPI-------VIENND  147 (271)
Q Consensus        78 ~I~iTH~H~DHi~Gl~~Lr~-~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~--~~~~~~~~~~~~~~-------~~~~~~  147 (271)
                      +|||||+|.||+++||.|-. +....+...|||+++.|.+..+-...-.+.  ........+.....       .+....
T Consensus        56 aVllSHah~DH~GaLP~L~~~~~~~~g~~~pIYaT~pt~~L~~~~l~D~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~l~  135 (717)
T 2i7x_A           56 VIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLK  135 (717)
T ss_dssp             EEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEEC
T ss_pred             EEEECCCCHHHHCCHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEC
T ss_conf             89977898677546689998513236988889966899999999999999975311655566789999999985048947


Q ss_pred             CCCCEEC--CCCCEEEEEEEEECCCEECCCCCC----CCEEEECCCCCCHHHHH-------------HHHCCHHEEEEEC
Q ss_conf             3342011--587489999995077621123346----86253032330016788-------------8622211025302
Q gi|254780214|r  148 VPICMKS--AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESL-------------EKLQNLDFLIIDA  208 (271)
Q Consensus       148 ~~~~~~~--~~~~i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~~~~e~~~-------------~~l~~~D~lI~d~  208 (271)
                      +......  ...+++++++..-|- ..+..+.|    ++++|++|.+...+..+             +.+...++||.++
T Consensus       136 Y~q~~~l~~~~~gl~it~~~AGH~-LGsa~~~I~~~~~~IvytgD~n~~~~~~L~ga~~~~~~~~~~~~l~~~~~li~~t  214 (717)
T 2i7x_A          136 YSQLVDLRSRYDGLTLLAYNAGVC-PGGSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTL  214 (717)
T ss_dssp             TTCCEEETTTTTTEEEEEEECSSS-TTCEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECC
T ss_pred             CCCEEECCCCCCCEEEEEEECCCC-CCCEEEEEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf             998598037888579999655632-3426999982995999963678888730047533455788643356787899807


Q ss_pred             C
Q ss_conf             3
Q gi|254780214|r  209 L  209 (271)
Q Consensus       209 l  209 (271)
                      .
T Consensus       215 ~  215 (717)
T 2i7x_A          215 D  215 (717)
T ss_dssp             S
T ss_pred             C
T ss_conf             7


No 19 
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.51  E-value=4.7e-13  Score=99.38  Aligned_cols=154  Identities=18%  Similarity=0.214  Sum_probs=98.6

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEEC
Q ss_conf             25999985417896513378878777787677444306999933677897189998798415667522334205999974
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTH   83 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH   83 (271)
                      -||||+||.                           +|++|+.     ++.+||||.-....  -.....-++|+|++||
T Consensus        12 ~MkIt~lGh---------------------------s~~lIe~-----~g~~ILiDP~~~~~--~~~~~~~~~D~VliSH   57 (220)
T 1vjn_A           12 HMKITWFGH---------------------------ACFALEM-----EGKTIVTDPFDESV--GYPIPNVTADVVTESH   57 (220)
T ss_dssp             CEEEEEEET---------------------------TEEEEEE-----TTEEEEESCCC-------CCCCCBCSEEECSS
T ss_pred             EEEEEEEEC---------------------------CEEEEEE-----CCEEEEECCCCCCC--CCCCCCCCCCEEEECC
T ss_conf             189999703---------------------------1999998-----99999989998877--8987778788999668


Q ss_pred             CCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEE
Q ss_conf             35242201110243331782111013112023210022221013667753100123211234433342011587489999
Q gi|254780214|r   84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP  163 (271)
Q Consensus        84 ~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~  163 (271)
                      .|.||...  .    .. .+.+ .+      .   ..                            ....  ..++++++.
T Consensus        58 ~H~DH~~~--~----~~-~~~~-~v------~---~~----------------------------~g~~--~~~~~~I~~   90 (220)
T 1vjn_A           58 QHFDHNAH--H----LV-KGNF-RV------I---DR----------------------------PGAY--TVNGVKIKG   90 (220)
T ss_dssp             CC---CGG--G----GC-BSSC-EE------E---CS----------------------------SEEE--EETTEEEEE
T ss_pred             CCCCCCCH--H----HC-CCCE-EE------E---CC----------------------------CCEE--EECCEEECC
T ss_conf             78676751--2----31-4626-99------6---04----------------------------5659--979822124


Q ss_pred             EEEECCC------EECCCCCCC----CEEEECCCCCCHH-HHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             9950776------211233468----6253032330016-7888622211025302335768875799999999997299
Q gi|254780214|r  164 ILQQHGR------ISSLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINP  232 (271)
Q Consensus       164 ~~~~Hg~------~~~~Gyri~----~~~Y~~Dt~~~~e-~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~  232 (271)
                      ++..|.+      ..++||.++    ++.|++|+...+. +.+..+.++|++++..   + .+.||+.+||+++++.++|
T Consensus        91 v~a~H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~~~~~~~~~~~~~Dva~lPi---g-g~~~m~~~eA~~~~~~l~p  166 (220)
T 1vjn_A           91 VETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPV---G-GTYTIGPKEAKEVADLLNA  166 (220)
T ss_dssp             EEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEEC---C-SSSSCCHHHHHHHHHHTTC
T ss_pred             CCCEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEC---C-CCCCCCHHHHHHHHHHHCC
T ss_conf             32065188885478757999984992999968988898999998528976899944---9-9653899999999997099


Q ss_pred             CEEEEECCCC
Q ss_conf             7799976888
Q gi|254780214|r  233 KNAILTHMHV  242 (271)
Q Consensus       233 k~~~LtHls~  242 (271)
                      |.++-+|...
T Consensus       167 k~vIP~H~~t  176 (220)
T 1vjn_A          167 KVIIPMHYKT  176 (220)
T ss_dssp             SEEEEESCCC
T ss_pred             CEEEEEECCC
T ss_conf             9999970599


No 20 
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.48  E-value=2.4e-14  Score=107.47  Aligned_cols=194  Identities=17%  Similarity=0.088  Sum_probs=103.0

Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCC
Q ss_conf             88787777876774443069999336778971899987984156675223342059999743524220111024333178
Q gi|254780214|r   23 GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ  102 (271)
Q Consensus        23 c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~  102 (271)
                      |.|--|-+..|.+.+..+++++-.    +++..+|||||++...+.+ ..+++||+||+||.|+||++|++.|+.     
T Consensus         3 ~~~~~~i~~~p~~~~~~~n~~li~----~~~~~~lID~G~~~~~~~~-~~~~~i~~VilTH~H~DH~gg~~~l~~-----   72 (261)
T 3adr_A            3 CRGLHSIPAGPVEFPEIATVYVMC----GEKLTVMIDAGVSNSIADF-SFLDKLDYIVLTHLHIDHIGLLPELLQ-----   72 (261)
T ss_dssp             CCEEEEEECSCTTCGGGSEEEEEE----CSSCEEEECCCCTTCCCCC-TTCSCCCEEECSCCSGGGTTTHHHHHH-----
T ss_pred             CCCEEEEECCCCCCCCEEEEEEEE----ECCEEEEECCCCCHHHHHH-HCCCCCCEEEECCCCCCCCCCHHHHHH-----
T ss_conf             785489207986768768999999----4995899879998299986-240678999959898644287667654-----


Q ss_pred             CCEEEEEECCEEEEEECCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEE-C
Q ss_conf             211101311202321002222-------------10136677531001232112344333420115874899999950-7
Q gi|254780214|r  103 KRPIDVYAAPDCMKHLFESFR-------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-H  168 (271)
Q Consensus       103 ~~~i~vy~~~~~~~~l~~~~~-------------y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~-H  168 (271)
                      ..+.+||+++...+.+.....             ..+....... .+......+   .......+..++.++..+..+ |
T Consensus        73 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~g~~~~lg~~~~~~~~~pGH  148 (261)
T 3adr_A           73 VYKAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLE-KKLDQDKVI---EVEGNEEFDLGGYRMRLIYTPGH  148 (261)
T ss_dssp             HSCCEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCC-SCCCGGGEE---EECSCCEEECSSSEEEEEECTTS
T ss_pred             CCCCCEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCEE---EECCCEEEEECCCEEEEEECCCC
T ss_conf             35674333787999862501245677888876400001014665-555655248---83363389506610047757988


Q ss_pred             CCEECCCCCCCCEEEECCCCCCHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             76211233468625303233001678886222110253023357688757999999999972997799976888
Q gi|254780214|r  169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV  242 (271)
Q Consensus       169 g~~~~~Gyri~~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~k~~~LtHls~  242 (271)
                       ...+++|.+++++|++|+....        -.+. +.....  +..+...+.++++..++++++.++.+|-..
T Consensus       149 -t~~~~~~~~~~vlftGD~~~~~--------~~~~-~~~~~~--~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~  210 (261)
T 3adr_A          149 -ARHHMSVLVDDFLFTGDSAGAY--------FNGV-VIPTTP--PVIDYKMYMESLKRQIELKPKVVGFAHGGL  210 (261)
T ss_dssp             -CTTCEEEEETTEEEEETSSCEE--------ETTE-EECCCC--SCCCHHHHHHHHHHHHHTCCSEEEETTTEE
T ss_pred             -CCCCEEEEECCEEEECCCCCCC--------CCCC-CCCCCC--CCCCHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             -8876899989999989846867--------7886-326899--998999999999999779989999299986


No 21 
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.47  E-value=6.7e-14  Score=104.68  Aligned_cols=83  Identities=22%  Similarity=0.314  Sum_probs=55.7

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC------------------
Q ss_conf             87259999854178965133788787777876774443069999336778971899987984------------------
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD------------------   63 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d------------------   63 (271)
                      |..-||+||=.|...      |                .|++|+.     ++++||||||+.                  
T Consensus         3 ~~~~~I~fldVGqG~------a----------------daili~~-----~g~~iLID~G~~~~~~~~~~~~~~~~~~~~   55 (547)
T 2bib_A            3 SSGNKIHFINVQEGG------S----------------DAIILES-----NGHFAMVDTGEDYDFPDGSDSRYPWREGIE   55 (547)
T ss_dssp             CSCEEEEEECBSSSB------C----------------CEEEEEE-----TTEEEEEECCCCSCCCCSSSTTSCCCTTCC
T ss_pred             CCCCEEEEEECCCCC------C----------------EEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             889999999889999------8----------------8999999-----999999989998656643222222222345


Q ss_pred             ----------HHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEE
Q ss_conf             ----------1566752233420599997435242201110243331782111013112023
Q gi|254780214|r   64 ----------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM  115 (271)
Q Consensus        64 ----------~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~  115 (271)
                                +...|.+.++++||+|||||.|.||++||+.|..-+    ..-.||.|+...
T Consensus        56 ~~~~~~~~~~v~~~L~~~gI~~ID~vIiTH~H~DHigGl~~ll~~~----~v~~i~~~~~~~  113 (547)
T 2bib_A           56 TSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELLSTY----PVDRVYLKKYSD  113 (547)
T ss_dssp             CCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHHHHHHS----CBSEEECCCCCG
T ss_pred             CCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHC----CCCEEEECCCCC
T ss_conf             5433212678899898759893799999999605769799999658----787899799752


No 22 
>1ztc_A Hypothetical protein TM0894; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.42  E-value=6.2e-13  Score=98.64  Aligned_cols=76  Identities=24%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCH-----HHHHHHCC--CCC
Q ss_conf             72599998541789651337887877778767744430699993367789718999879841-----56675223--342
Q gi|254780214|r    3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF-----YMQVLREQ--VLS   75 (271)
Q Consensus         3 ~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~-----r~ql~~~~--i~~   75 (271)
                      -+||++||++|+..-+|...            +....++++|+.     +++++|||||+..     ..++.+.+  .++
T Consensus        11 ~~m~~~~~~~g~~~~~~~~~------------~~~~~~~~li~~-----~~~~iLIDtG~~~~~~~l~~~l~~~g~~~~~   73 (221)
T 1ztc_A           11 HHMELKILVTGGNVFVPGRL------------NAHFSTVVYLEH-----KDRRIIIDPGNLSSMDELEEKFSELGISPDD   73 (221)
T ss_dssp             CCEEEEEEECCBEEEETTTE------------ECCBCCEEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHHTCCGGG
T ss_pred             CEEEEEEEECCCCEECCCCC------------CCCCEEEEEEEE-----CCEEEEEECCCCCCHHHHHHHHHHCCCCHHH
T ss_conf             53698999818975458866------------788237999998-----9999999199972199999999984999689


Q ss_pred             CCEEEEECCCHHHHHHCCHH
Q ss_conf             05999974352422011102
Q gi|254780214|r   76 IDAVLYTHPHADHIHGIDGL   95 (271)
Q Consensus        76 Id~I~iTH~H~DHi~Gl~~L   95 (271)
                      ||+||+||.|+||++|+..+
T Consensus        74 I~~Ii~TH~H~DH~gg~~~~   93 (221)
T 1ztc_A           74 ITDVLFTHVHLDHIFNSVLF   93 (221)
T ss_dssp             CCEEECSCCCHHHHGGGGGC
T ss_pred             CCEEEECCCCCCCCCCHHHC
T ss_conf             84999599872444541210


No 23 
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.15  E-value=1e-10  Score=84.90  Aligned_cols=71  Identities=20%  Similarity=0.276  Sum_probs=49.1

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCHH-----HHHHHCC--CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECC
Q ss_conf             06999933677897189998798415-----6675223--3420599997435242201110243331782111013112
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP  112 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~r-----~ql~~~~--i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~  112 (271)
                      +|.+|..     ++++||||||..-.     .++.+.+  +++|++||+||.|.||++|++.|+.     +...+||+++
T Consensus        39 ~~~li~~-----~~g~iLID~G~~~~~~~~~~~l~~~g~~~~~I~~Il~TH~H~DH~gg~~~l~~-----~~~~~V~~~~  108 (269)
T 1sml_A           39 TALLVQT-----PDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKR-----RTGAKVAANA  108 (269)
T ss_dssp             CCEEEEE-----TTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHH-----HSSCEEEECH
T ss_pred             EEEEEEE-----CCEEEEECCCCCCHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCCCHHHHHH-----HHCCCEEECH
T ss_conf             8999998-----99769984899512999999999749980325499979998354150999999-----8699476378


Q ss_pred             EEEEEECC
Q ss_conf             02321002
Q gi|254780214|r  113 DCMKHLFE  120 (271)
Q Consensus       113 ~~~~~l~~  120 (271)
                      .....+.+
T Consensus       109 ~~~~~~~~  116 (269)
T 1sml_A          109 ESAVLLAR  116 (269)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
T ss_conf             89887750


No 24 
>2gmn_A Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobium japonicum usda 110} SCOP: d.157.1.1
Probab=99.03  E-value=5e-10  Score=80.58  Aligned_cols=72  Identities=21%  Similarity=0.225  Sum_probs=49.1

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCC-----HHHHHHHCC--CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECC
Q ss_conf             069999336778971899987984-----156675223--3420599997435242201110243331782111013112
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP  112 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d-----~r~ql~~~~--i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~  112 (271)
                      ++.+|..     +++.+|||+|..     ++.++.+.+  .++|++|++||.|.||++|+..|+..     ...+||+++
T Consensus        36 n~ylI~~-----~~~~iLID~G~~~~~~~i~~~l~~~g~~~~~v~~ii~TH~H~DH~gg~~~l~~~-----~~a~i~~~~  105 (274)
T 2gmn_A           36 AVYVIKT-----SQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE-----TGAQLVAGE  105 (274)
T ss_dssp             CCEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHH-----HCCEEEEEG
T ss_pred             EEEEEEE-----CCEEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHHH-----CCCEEEEEH
T ss_conf             9999998-----999799909894349999999997599813303999698996350625565775-----398487501


Q ss_pred             EEEEEECCC
Q ss_conf             023210022
Q gi|254780214|r  113 DCMKHLFES  121 (271)
Q Consensus       113 ~~~~~l~~~  121 (271)
                      .....++..
T Consensus       106 ~~~~~~~~~  114 (274)
T 2gmn_A          106 RDKPLLEGG  114 (274)
T ss_dssp             GGHHHHHHT
T ss_pred             HHHHHHHCC
T ss_conf             010444323


No 25 
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.93  E-value=5e-10  Score=80.59  Aligned_cols=45  Identities=27%  Similarity=0.374  Sum_probs=34.5

Q ss_pred             CCCEEEEEECCCC---------HHHHHHHCCC--CCCCEEEEECCCHHHHHHCCHH
Q ss_conf             8971899987984---------1566752233--4205999974352422011102
Q gi|254780214|r   51 GSNTTVIVDTGPD---------FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL   95 (271)
Q Consensus        51 ~~~~~iLiD~G~d---------~r~ql~~~~i--~~Id~I~iTH~H~DHi~Gl~~L   95 (271)
                      .++..||||||.+         +..+|.+.++  ++||+|++||.|.||++|+..+
T Consensus       104 ~g~~~iLIDtG~g~~~~~~~~~l~~~L~~~Gi~p~dId~VvlTH~H~DHiGGl~~~  159 (331)
T 1p9e_A          104 TGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVG  159 (331)
T ss_dssp             CSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEET
T ss_pred             ECCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHCCHHHH
T ss_conf             89988999899985666118899999998499989997999597970101413355


No 26 
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=98.92  E-value=1.1e-09  Score=78.39  Aligned_cols=50  Identities=28%  Similarity=0.427  Sum_probs=37.3

Q ss_pred             EEEEEECCCCCCCEEEEEECCCC-------------------HHHHHHHCCC--CCCCEEEEECCCHHHHHHCCHH
Q ss_conf             69999336778971899987984-------------------1566752233--4205999974352422011102
Q gi|254780214|r   41 SLKISRVSERGSNTTVIVDTGPD-------------------FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL   95 (271)
Q Consensus        41 s~~i~~~~~~~~~~~iLiD~G~d-------------------~r~ql~~~~i--~~Id~I~iTH~H~DHi~Gl~~L   95 (271)
                      |.||+.     ++.+||||||.+                   +..+|.+.++  ++||+|++||+|.||++|+.+.
T Consensus        50 ~~LI~~-----~~~~iLiDtG~g~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dId~VilTH~H~DH~Ggl~~~  120 (280)
T 3esh_A           50 PILIQT-----AQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQ  120 (280)
T ss_dssp             CEEEEC-----SSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCT
T ss_pred             EEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCCCHHHC
T ss_conf             999992-----99059996289962235532333577631069999998499979998997678966545880002


No 27 
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=98.92  E-value=1e-09  Score=78.61  Aligned_cols=124  Identities=16%  Similarity=0.144  Sum_probs=61.2

Q ss_pred             CCEEEEEECCCCHH---HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCC
Q ss_conf             97189998798415---667522334205999974352422011102433317821110131120232100222210136
Q gi|254780214|r   52 SNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA  128 (271)
Q Consensus        52 ~~~~iLiD~G~d~r---~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~  128 (271)
                      ++..+|||+|.+..   .++.+.+. +|++|++||.|+||++|+..|+.     ..+.++|+.+...+.+..........
T Consensus        23 ~~~~ilID~G~~~~~i~~~l~~~~~-~i~~Vi~TH~H~DH~gg~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~   96 (210)
T 2xf4_A           23 TRLAALVDPGGDAEKIKQEVDASGV-TLMQILLTHGHLDHVGAASELAQ-----HYGVPVIGPEKEDEFWLQGLPAQSRM   96 (210)
T ss_dssp             TCEEEEECCCSCHHHHHHHHHHHTC-EEEEEECSCSCHHHHTTHHHHHH-----HHTCCEECCCGGGHHHHHTHHHHHHH
T ss_pred             CCEEEEEECCCCHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCHHHHHH-----HHCCCEEEECCHHHHHHCCCHHHHHH
T ss_conf             9989999798089999999997799-34899978799855351899877-----50984785010456652042123211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEE-CCCEECCCCCCC--CEEEECCC
Q ss_conf             677531001232112344333420115874899999950-776211233468--62530323
Q gi|254780214|r  129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-HGRISSLGFRFG--NVAYCTDV  187 (271)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~-Hg~~~~~Gyri~--~~~Y~~Dt  187 (271)
                      .......+......+     ........+..++..+..+ | ...++.|.+.  ++++++|.
T Consensus        97 ~~~~~~~~~~~~~~~-----~dg~~~~~g~~~~~~i~tPGH-T~g~~~~~~~~~~~l~~GD~  152 (210)
T 2xf4_A           97 FGLDECQPLTPDRWL-----NDGDRVSVGNVTLQVLHCPGH-TPGHVVFFDEQSQLLISGDV  152 (210)
T ss_dssp             TTCCCCCCCCCSBCC-----CTTCEEEETTEEEEEEECCSS-STTCEEEEETTTTEEEEETS
T ss_pred             CCCCCCCCCCCCEEE-----CCCCCCEECCEEEEEEEECCC-CCCCEEEEECCCCCCCCCCE
T ss_conf             033345567785893-----168742369989999992699-99868999778884214888


No 28 
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER assymmetric UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=98.91  E-value=1.9e-09  Score=77.05  Aligned_cols=72  Identities=13%  Similarity=0.230  Sum_probs=48.3

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCH-----HHHHHHCC--CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECC
Q ss_conf             0699993367789718999879841-----56675223--3420599997435242201110243331782111013112
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDF-----YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP  112 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~-----r~ql~~~~--i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~  112 (271)
                      +|.+|..     +++.+|||||...     +.++...+  .++|++||+||.|.||++|+..++     ...+.+||+++
T Consensus        26 ~~~li~~-----~~~~iLID~G~~~~~~~i~~~l~~~g~~~~~i~~il~TH~H~DH~gg~~~~~-----~~~~a~i~~~~   95 (263)
T 1k07_A           26 ASYLIVT-----PRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIK-----QQTKAKYMVMD   95 (263)
T ss_dssp             CCEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHH-----HHHCCEEEEEH
T ss_pred             EEEEEEE-----CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCHHHHHH-----HHCCCEEEEEC
T ss_conf             9999998-----9989999398952099999999976999534269997898701114199998-----75399799940


Q ss_pred             EEEEEECCC
Q ss_conf             023210022
Q gi|254780214|r  113 DCMKHLFES  121 (271)
Q Consensus       113 ~~~~~l~~~  121 (271)
                      .....+.+.
T Consensus        96 ~~~~~l~~~  104 (263)
T 1k07_A           96 EDVSVILSG  104 (263)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHH
T ss_conf             587777521


No 29 
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8}
Probab=98.88  E-value=1.3e-08  Score=71.71  Aligned_cols=59  Identities=19%  Similarity=0.239  Sum_probs=39.4

Q ss_pred             CCCEEEEEECCCCHH-------HHHHHCC--CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEE
Q ss_conf             897189998798415-------6675223--3420599997435242201110243331782111013112023
Q gi|254780214|r   51 GSNTTVIVDTGPDFY-------MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM  115 (271)
Q Consensus        51 ~~~~~iLiD~G~d~r-------~ql~~~~--i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~  115 (271)
                      +++..+|||||.+..       .++.+.+  .++|++|++||.|.||++|...++      +...+||+++...
T Consensus        29 ~~~~~vlIDtG~~~~~~~~~l~~~l~~~g~~~~~I~~Vi~TH~H~DH~Gg~~~l~------~~g~~v~~~~~~~   96 (317)
T 2zo4_A           29 GAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFE------GLGARVFLHEEEF   96 (317)
T ss_dssp             ETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHH------HTTCEEEEEGGGT
T ss_pred             ECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHH------HCCCCEECCHHHH
T ss_conf             8998999989999778999999999974999777249997998822222199997------4599831378888


No 30 
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.86  E-value=1.4e-09  Score=77.89  Aligned_cols=117  Identities=16%  Similarity=0.228  Sum_probs=62.5

Q ss_pred             CEEEEEECCCC-HHHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC
Q ss_conf             71899987984-1566752-----23342059999743524220111024333178211101311202321002222101
Q gi|254780214|r   53 NTTVIVDTGPD-FYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF  126 (271)
Q Consensus        53 ~~~iLiD~G~d-~r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f  126 (271)
                      ++.+|||+|.. ...++++     .+.++|++|++||.|.||++|++.|.    ..-...+||+++.+.+.+...+..  
T Consensus        49 e~~vLIDtg~~~~~~~~l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~----~~~p~a~i~~~~~~~~~~~~~~~~--  122 (414)
T 2q9u_A           49 ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHY----HKFTNATFVCTKKCQEHLKILYGM--  122 (414)
T ss_dssp             SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHG----GGSTTCEEEECHHHHHHHHHHHCC--
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHH----HHCCCCEEEECHHHHHHHHHHCCC--
T ss_conf             98899909980169999999997569877998996909664760299999----878898799758999888874389--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC-CCEEEECCC
Q ss_conf             3667753100123211234433342011587489999995077621123346-862530323
Q gi|254780214|r  127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCTDV  187 (271)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~Dt  187 (271)
                         ....      ....   .........+..+++.+.+..|.+....-|.- .++.|++|.
T Consensus       123 ---~~~~------~~~~---~~g~~l~lg~~~l~~i~~p~gH~~~~~~~y~~~~~iLfsGD~  172 (414)
T 2q9u_A          123 ---EKAT------WLIV---DDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDG  172 (414)
T ss_dssp             ---TTCC------EEEC---CTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETT
T ss_pred             ---CCCC------EEEE---CCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEECCC
T ss_conf             ---8652------5871---589889756558999703689868978999989896894574


No 31 
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3
Probab=98.84  E-value=2e-09  Score=76.85  Aligned_cols=122  Identities=11%  Similarity=0.149  Sum_probs=65.0

Q ss_pred             EEEEEECCCCCCCEEEEEECCC-CHHHHHH---HC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE
Q ss_conf             6999933677897189998798-4156675---22--3342059999743524220111024333178211101311202
Q gi|254780214|r   41 SLKISRVSERGSNTTVIVDTGP-DFYMQVL---RE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC  114 (271)
Q Consensus        41 s~~i~~~~~~~~~~~iLiD~G~-d~r~ql~---~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~  114 (271)
                      |-+|.     ++++.+|||+|. ....+++   +.  +.++|++|++||.|.||++|++.|+.-+   ....+||+++..
T Consensus        54 sYLI~-----~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~I~yIi~TH~H~DH~Ggl~~l~~~~---~~~~~i~~~~~~  125 (410)
T 1vme_A           54 AYLVK-----LNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTI---GHDVEIIASNFG  125 (410)
T ss_dssp             EEEEE-----CSSCEEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHH---CSCCEEEECHHH
T ss_pred             EEEEE-----ECCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH---CCCCEEEECHHH
T ss_conf             99999-----7995799919975679999999997579767689994939653775499999970---999899978888


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCCCCEEEECCC
Q ss_conf             3210022221013667753100123211234433342011587489999995077621123346862530323
Q gi|254780214|r  115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV  187 (271)
Q Consensus       115 ~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~~~~Y~~Dt  187 (271)
                      .+.+...+.    ..         ....++.   .......+..+++.+.+..|.+...+-| ..++.|++|.
T Consensus       126 ~~~~~~~~~----~~---------~~~~v~~---g~~l~lG~~~l~~i~~P~~H~p~~~~~y-~~~iLFsgD~  181 (410)
T 1vme_A          126 KRLLEGFYG----IK---------DVTVVKD---GEEREIGGKKFKFVMTPWLHWPDTMVTY-LDGILFSCDV  181 (410)
T ss_dssp             HHHHHHHHC----CC---------CCEECCT---TCEEEETTEEEEEEECTTSSSTTCEEEE-ETTEEEEETT
T ss_pred             HHHHHHCCC----CC---------CCEEECC---CCEEEECCEEEEEEECCCCCCCCCCCEE-ECCEEEECCC
T ss_conf             642010167----65---------3168357---9999866726999978998889971021-2898998863


No 32 
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.82  E-value=2.1e-09  Score=76.75  Aligned_cols=65  Identities=17%  Similarity=0.233  Sum_probs=43.7

Q ss_pred             CEEEEEECCCC-HHHHH---HHC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC
Q ss_conf             71899987984-15667---522--33420599997435242201110243331782111013112023210022
Q gi|254780214|r   53 NTTVIVDTGPD-FYMQV---LRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES  121 (271)
Q Consensus        53 ~~~iLiD~G~d-~r~ql---~~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~  121 (271)
                      ++.+|||+|.. ...++   ++.  +.++|++|++||.|.||++|++.|..    .-...++|+++...+.+...
T Consensus        43 e~~vLIDtg~~~~~~~~~~~l~~~i~~~~I~~II~TH~H~DHiggl~~l~~----~~~~~~v~~~~~~~~~~~~~  113 (402)
T 1e5d_A           43 EKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIE----ACQPEKIFTSSLGQKAMESH  113 (402)
T ss_dssp             SSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHH----HHCCSEEEEEHHHHHHHHHH
T ss_pred             CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCEEEECHHHHHHHHHC
T ss_conf             999999599824699999999975698788889939996678867999999----77999899757788887731


No 33 
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A*
Probab=98.78  E-value=3.3e-09  Score=75.48  Aligned_cols=66  Identities=15%  Similarity=0.191  Sum_probs=43.3

Q ss_pred             CCEEEEEECCCCH-----HHHHH----HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC
Q ss_conf             9718999879841-----56675----2233420599997435242201110243331782111013112023210022
Q gi|254780214|r   52 SNTTVIVDTGPDF-----YMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES  121 (271)
Q Consensus        52 ~~~~iLiD~G~d~-----r~ql~----~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~  121 (271)
                      +++.+|||+|..-     ..++.    ..+.++|++|++||.|.||++|++.+..    .....++|+++.....+...
T Consensus        43 ~~~~~LIDtG~~~~~~~~~~~l~~~~~~i~~~~I~~Ii~TH~H~DH~ggl~~~~~----~~~~~~~~~~~~~~~~l~~~  117 (404)
T 2ohh_A           43 DEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHR----RFPEAPIYCTEVAVKGLLKH  117 (404)
T ss_dssp             SSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHH----HSTTCCEEECHHHHHHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHH----HCCCCEEEECHHHHHHHHHH
T ss_conf             9825999198984389999999999864796568699989999875411999998----77998899678888777752


No 34 
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.78  E-value=2.7e-09  Score=76.06  Aligned_cols=64  Identities=17%  Similarity=0.255  Sum_probs=43.1

Q ss_pred             CEEEEEECCC-CHHHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC
Q ss_conf             7189998798-41566752-----23342059999743524220111024333178211101311202321002
Q gi|254780214|r   53 NTTVIVDTGP-DFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE  120 (271)
Q Consensus        53 ~~~iLiD~G~-d~r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~  120 (271)
                      +..+|||+|. ....++++     .+.++|++|++||.|.||++|++.|..    ....+++|+++.+.+.+..
T Consensus        44 ~~~vLIDtg~~~~~~~~~~~l~~~~~~~~I~~Ii~TH~H~DH~Gg~~~l~~----~~p~~~v~~~~~~~~~~~~  113 (398)
T 1ycg_A           44 DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIME----LCPDAHVLCTQRAFDSLKA  113 (398)
T ss_dssp             SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHH----HCTTCEEEECHHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCEEEECHHHHHHHHH
T ss_conf             999999499846799999999975597686599927898677705999998----6899989968999987764


No 35 
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching, alternative binding site, product complex; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovarkurstaki} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=98.75  E-value=1.6e-08  Score=71.23  Aligned_cols=94  Identities=12%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCC--CCCC-EEEEEECCCCCCCEEEEEECCCC-----------------
Q ss_conf             259999854178965133788787777876774--4430-69999336778971899987984-----------------
Q gi|254780214|r    4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNR--RTRS-SLKISRVSERGSNTTVIVDTGPD-----------------   63 (271)
Q Consensus         4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~--R~~~-s~~i~~~~~~~~~~~iLiD~G~d-----------------   63 (271)
                      ..||.+|-+|.-. .+     -+.-.++...++  +... +.+|+.     ++..||||+|-+                 
T Consensus         7 ~~~~~~l~~G~~~-~~-----~~~~~~~~~~~~~~~~pv~~~LI~~-----~~g~iLiDtG~~~~~~~~~~~~~~~~~~~   75 (254)
T 3dha_A            7 VKKLYFIPAGRCM-LD-----HSSVNSALTPGKLLNLPVWCYLLET-----EEGPILVDTGMPESAVNNEGLFNGTFVEG   75 (254)
T ss_dssp             BSEEEEEEEEEEE-EE-----GGGTSTTSCSCCEEEEEEEEEEEEE-----TTEEEEECCCCCGGGBTCTTTTTTSTTTT
T ss_pred             EEEEEEECCCEEE-EC-----HHHCCCCCCCCCEEEEEEEEEEEEE-----CCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             1489995386599-88-----6880567999966986348999998-----99519995988955322331125421112


Q ss_pred             -----------HHHHHHHCCC--CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEE
Q ss_conf             -----------1566752233--4205999974352422011102433317821110131120232
Q gi|254780214|r   64 -----------FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK  116 (271)
Q Consensus        64 -----------~r~ql~~~~i--~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~  116 (271)
                                 +..||.+.++  .+|++|++||.|.||++|+..+      .  ..++|..+.-.+
T Consensus        76 ~~~~~~~~~~~l~~~L~~~G~~p~dI~~Vi~TH~H~DH~Gg~~~f------~--~A~i~~~~~e~~  133 (254)
T 3dha_A           76 QILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAF------T--NTPIIVQRTEYE  133 (254)
T ss_dssp             TEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGC------S--SSCEEEEHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHCCCCCCC------C--CCCCCCCHHHHH
T ss_conf             356565606689999998499979996999079972102753113------5--642003888999


No 36 
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.74  E-value=1.6e-08  Score=71.20  Aligned_cols=65  Identities=18%  Similarity=0.147  Sum_probs=43.2

Q ss_pred             CCEEEEEECCCCH-----HHHHHHC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC
Q ss_conf             9718999879841-----5667522--3342059999743524220111024333178211101311202321002
Q gi|254780214|r   52 SNTTVIVDTGPDF-----YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE  120 (271)
Q Consensus        52 ~~~~iLiD~G~d~-----r~ql~~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~  120 (271)
                      ++..+|||||..-     ..++.+.  +.++|++|++||.|.||++|+..|+.    .....+||+++.+.+.+.+
T Consensus        33 ~~~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~----~~p~~~v~~~~~~~~~~~~  104 (303)
T 2vw8_A           33 EASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCP----RLPNVQVLASERTCQAWKS  104 (303)
T ss_dssp             TTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGG----GCTTCEEEEEHHHHHHTTC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHH----CCCCCEEEECHHHHHHHHC
T ss_conf             98689995989852999999999828982427989959099865086345542----1678669944889998736


No 37 
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center, quorum quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=98.70  E-value=2.4e-08  Score=70.16  Aligned_cols=63  Identities=24%  Similarity=0.285  Sum_probs=41.1

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCC---------------------------HHHHHHHCCC--CCCCEEEEECCCHHHHH
Q ss_conf             069999336778971899987984---------------------------1566752233--42059999743524220
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPD---------------------------FYMQVLREQV--LSIDAVLYTHPHADHIH   90 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d---------------------------~r~ql~~~~i--~~Id~I~iTH~H~DHi~   90 (271)
                      .+.+|+.     +++.||||+|-.                           +..||.+.++  .+|+.|++||+|.||++
T Consensus        44 ~~~LI~~-----~~g~iLvDtG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dI~~VilTH~H~DH~G  118 (276)
T 2r2d_A           44 SAYLIQC-----TDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAG  118 (276)
T ss_dssp             EEEEEEC-----SSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTST
T ss_pred             EEEEEEE-----CCEEEEEECCCCHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCC
T ss_conf             8999994-----99049995788845512433343022211554565320299999983999799989984799604237


Q ss_pred             HCCHHHHHHHCCCCEEEEEECCEEE
Q ss_conf             1110243331782111013112023
Q gi|254780214|r   91 GIDGLRGYFLKQKRPIDVYAAPDCM  115 (271)
Q Consensus        91 Gl~~Lr~~~~~~~~~i~vy~~~~~~  115 (271)
                      |+..+      .  ..++|..+...
T Consensus       119 gl~~f------~--~a~i~~~~~e~  135 (276)
T 2r2d_A          119 CVEYF------G--KSRLIAHEDEF  135 (276)
T ss_dssp             TGGGC------S--SSEEEEEHHHH
T ss_pred             CCCCC------C--CCCCCCCHHHH
T ss_conf             41357------8--63000389999


No 38 
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=98.64  E-value=2.1e-08  Score=70.55  Aligned_cols=169  Identities=14%  Similarity=0.145  Sum_probs=79.9

Q ss_pred             CEEEEEECCCCH-HHHHH---H--CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC
Q ss_conf             718999879841-56675---2--23342059999743524220111024333178211101311202321002222101
Q gi|254780214|r   53 NTTVIVDTGPDF-YMQVL---R--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF  126 (271)
Q Consensus        53 ~~~iLiD~G~d~-r~ql~---~--~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f  126 (271)
                      +..+|||+|..- ..+++   +  .+.++|++|++||.|.||++|+..+..    .....++|+++...+.+.+.+..  
T Consensus        51 d~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~----~~p~~~v~~~~~~~~~l~~~~~~--  124 (262)
T 3hnn_A           51 DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLE----LAPQITFVCSLPAAGDLRAAFPD--  124 (262)
T ss_dssp             SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHH----HCTTCEEEECHHHHHHHHHHSSS--
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCEEEECHHHHHHHHHHHCC--
T ss_conf             999999189755799999999963784258899959977777622599997----44485799778999888765235--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEECC-CCCEEEEEEEEECCCEECCCCCC-CCEEEECCCCC--CHHHHHHHHCCHH
Q ss_conf             36677531001232112344333420115-87489999995077621123346-86253032330--0167888622211
Q gi|254780214|r  127 KALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLGFRF-GNVAYCTDVNA--FPAESLEKLQNLD  202 (271)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~Dt~~--~~e~~~~~l~~~D  202 (271)
                        ...       ....+..   ....... +..+...+....|......-|.- +++.+++|.-.  .+..... ....+
T Consensus       125 --~~~-------~~~~~~~---gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~-~~~~~  191 (262)
T 3hnn_A          125 --DNL-------NILPMRG---KETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVF-DDNWE  191 (262)
T ss_dssp             --SCC-------EEEECCS---SCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCE-ESCGG
T ss_pred             --CCC-------CCCEECC---CCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCC-CCCHH
T ss_conf             --664-------3220025---5147622782379996689998996299987888699666345677886550-67716


Q ss_pred             EEEEECCCC-C--CCCCCCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf             025302335-7--6887579999999999729977999768
Q gi|254780214|r  203 FLIIDALKN-G--LHSSHFSLSESLKKIELINPKNAILTHM  240 (271)
Q Consensus       203 ~lI~d~l~~-~--~~~~H~~~~ea~~~~~~~~~k~~~LtHl  240 (271)
                      .+..+...+ .  -.+....+.++++.++++.++.++-.|=
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~sL~~l~~L~~~~I~PgHG  232 (262)
T 3hnn_A          192 SFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHG  232 (262)
T ss_dssp             GTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSS
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf             78999999999850524999999999987899899995798


No 39 
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes}
Probab=98.62  E-value=2.1e-08  Score=70.56  Aligned_cols=63  Identities=22%  Similarity=0.298  Sum_probs=43.7

Q ss_pred             CCEEEEEECCC--CHHHHHHH----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC
Q ss_conf             97189998798--41566752----23342059999743524220111024333178211101311202321002
Q gi|254780214|r   52 SNTTVIVDTGP--DFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE  120 (271)
Q Consensus        52 ~~~~iLiD~G~--d~r~ql~~----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~  120 (271)
                      ++..+|||+|.  +...++++    ...++|++|++||.|.||++|+..|.    .  ..+++|+++.+.+.+++
T Consensus        39 ~~~~vlIDtg~~~~~~~~l~~~i~~~~~~~i~~ii~TH~H~DH~gG~~~~~----~--~~~~i~a~~~~~~~~~~  107 (219)
T 3l6n_A           39 KKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFN----N--KGIKTYATAKTNEFLKK  107 (219)
T ss_dssp             TTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHH----H--TTCEEEECHHHHHHHHH
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH----H--CCCEEEEHHHHHHHHHC
T ss_conf             999999929899899999999998602996389997999954338689996----2--89889960222233210


No 40 
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=98.60  E-value=3.7e-08  Score=68.96  Aligned_cols=66  Identities=23%  Similarity=0.317  Sum_probs=42.2

Q ss_pred             EEEEEECCCCCCCEEEEEECCCCHHH--HHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEE
Q ss_conf             69999336778971899987984156--67522334205999974352422011102433317821110131120232
Q gi|254780214|r   41 SLKISRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK  116 (271)
Q Consensus        41 s~~i~~~~~~~~~~~iLiD~G~d~r~--ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~  116 (271)
                      |.+|..     ++..+|||+|.+...  +.++..-.++++|++||.|+||++|+..|+.     ..+..+|..+....
T Consensus        15 ~ylI~~-----~~~~ilID~G~~~~~~~~~l~~~~~~~~~vi~TH~H~DH~~g~~~l~~-----~~~~~~~~~~~~~~   82 (207)
T 2zwr_A           15 AYLVET-----GEGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVE-----ALDLPVYLHPLDLP   82 (207)
T ss_dssp             EEEEEE-----TTEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHH-----HHCCCEEECGGGHH
T ss_pred             EEEEEE-----CCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHH-----HHCCCEEECCCCCC
T ss_conf             999998-----998999949869999999999879972499979997667521999999-----86994896133220


No 41 
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.57  E-value=4.5e-08  Score=68.45  Aligned_cols=69  Identities=16%  Similarity=0.229  Sum_probs=45.5

Q ss_pred             EEEEEECCCCCCCEEEEEECCCCH--HHHHHH----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE
Q ss_conf             699993367789718999879841--566752----23342059999743524220111024333178211101311202
Q gi|254780214|r   41 SLKISRVSERGSNTTVIVDTGPDF--YMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC  114 (271)
Q Consensus        41 s~~i~~~~~~~~~~~iLiD~G~d~--r~ql~~----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~  114 (271)
                      |.+|..     ++..+|||+|.+-  ..++++    ...++|++|++||.|.||++|+..|.      +..+++|+++.+
T Consensus        39 ~~li~~-----~~~~iliDt~~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~~~------~~~~~v~~~~~~  107 (232)
T 1a7t_A           39 GMIVIN-----NHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQ------RKGVQSYANQMT  107 (232)
T ss_dssp             EEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHH------HTTCEEEEEHHH
T ss_pred             EEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH------HCCCEEEEECCH
T ss_conf             999998-----999999969899899999999998713997389997998852223399998------589959982202


Q ss_pred             EEEECC
Q ss_conf             321002
Q gi|254780214|r  115 MKHLFE  120 (271)
Q Consensus       115 ~~~l~~  120 (271)
                      .+.+.+
T Consensus       108 ~~~~~~  113 (232)
T 1a7t_A          108 IDLAKE  113 (232)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             556543


No 42 
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding, periplasm,; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A
Probab=98.57  E-value=1.9e-08  Score=70.73  Aligned_cols=65  Identities=12%  Similarity=0.071  Sum_probs=43.1

Q ss_pred             CCCEEEEEECCCC--HHHHHH---H-CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC
Q ss_conf             8971899987984--156675---2-233420599997435242201110243331782111013112023210022
Q gi|254780214|r   51 GSNTTVIVDTGPD--FYMQVL---R-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES  121 (271)
Q Consensus        51 ~~~~~iLiD~G~d--~r~ql~---~-~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~  121 (271)
                      +++..+|||+|.+  ...++.   + ...++|++|++||.|.||++|...+.    .  ...+||+++.+.+.+++.
T Consensus        30 ~~~~~vliD~g~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~~~----~--~~~~i~a~~~~~~~~~~~  100 (227)
T 3iog_A           30 GAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWK----S--IGAKVVSTRQTRDLMKSD  100 (227)
T ss_dssp             CSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHH----H--TTCEEEEEHHHHHHHHHH
T ss_pred             ECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCC----C--CCCEEEECHHHHHHHHHH
T ss_conf             7998699929899799999999998614998419996899965328123305----4--683676179899998741


No 43 
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- lactamase superfamily; 1.45A {Salmonella typhimurium LT2} SCOP: d.157.1.2
Probab=98.55  E-value=7.3e-08  Score=67.15  Aligned_cols=107  Identities=18%  Similarity=0.233  Sum_probs=59.3

Q ss_pred             CCEEEEEECCCCHH-HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCC
Q ss_conf             97189998798415-66752233420599997435242201110243331782111013112023210022221013667
Q gi|254780214|r   52 SNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD  130 (271)
Q Consensus        52 ~~~~iLiD~G~d~r-~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~  130 (271)
                      .+..++||+|..-. .+.++..--++.+|++||.|+||+.|...++..+    ....+|++......          .  
T Consensus        28 ~~~avvIDPg~~~~il~~l~~~~~~l~~Il~TH~H~DHi~g~~~l~~~~----~~~~~~~~~~~~~~----------~--   91 (258)
T 2qed_A           28 EGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHF----PQMTVYGPAETQDK----------G--   91 (258)
T ss_dssp             TSEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHC----TTCEEEECGGGGGG----------T--
T ss_pred             CCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH----CCEEEECCCCCCCC----------C--
T ss_conf             9709998698759999999976990579993799987655335544432----02145215433345----------5--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCCCCEEEECCC
Q ss_conf             753100123211234433342011587489999995077621123346862530323
Q gi|254780214|r  131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV  187 (271)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~~~~Y~~Dt  187 (271)
                              ....+     ..+.....+++++..+..+-....++.|.+++.+++|||
T Consensus        92 --------~~~~l-----~dgd~i~iG~~~~~vihTPGHT~g~v~~~~~~~lFtGDt  135 (258)
T 2qed_A           92 --------ATHLV-----GDGDTIRVLGEKFTLFATPGHTLGHVCYFSRPYLFCGDT  135 (258)
T ss_dssp             --------CSEEC-----CTTCEEEETTEEEEEEECCSSSTTCEEEEETTEEEEETT
T ss_pred             --------CCEEE-----CCCCEEEECCEEEEEEECCCCCCCCEEEEECCEEEECCC
T ss_conf             --------41464-----058678768845799967899988667873240560781


No 44 
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.54  E-value=1.8e-07  Score=64.70  Aligned_cols=117  Identities=15%  Similarity=0.116  Sum_probs=59.7

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCHH-HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEE
Q ss_conf             06999933677897189998798415-66752233420599997435242201110243331782111013112023210
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL  118 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~r-~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l  118 (271)
                      .|-+|.. .  ..+..++||+|..-. .+.++..-.++.+|++||.|+||++|...|+.     ..+.++|+.+...+.+
T Consensus        13 y~Yli~d-~--~t~~~~vIDp~~~~~vl~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~-----~~~~~i~~~~~~~~~~   84 (254)
T 1xm8_A           13 YAYILHD-E--DTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKD-----RYGAKVIGSAMDKDRI   84 (254)
T ss_dssp             EEEEEEC-T--TTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHH-----HHCCEEEEEGGGGGGS
T ss_pred             EEEEEEE-C--CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH-----HCCCEEEEECCCCCCC
T ss_conf             8999998-9--999899998978299999999779916899944788655266899988-----6398389733322458


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC--CCEEEECCC
Q ss_conf             022221013667753100123211234433342011587489999995077621123346--862530323
Q gi|254780214|r  119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--GNVAYCTDV  187 (271)
Q Consensus       119 ~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri--~~~~Y~~Dt  187 (271)
                      .                . .. ..++     .+.....++.++..+..+-....++.|-+  .+++++|||
T Consensus        85 ~----------------~-~~-~~~~-----dgd~i~~g~~~~~vi~tPGHT~ghv~~~~~~~~~lftGDt  132 (254)
T 1xm8_A           85 P----------------G-ID-MALK-----DGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDT  132 (254)
T ss_dssp             T----------------T-EE-EEEC-----TTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETT
T ss_pred             C----------------C-CC-EEEC-----CCCEEEECCEEEEEEECCCCCCCCEEEEECCCCEEEECCE
T ss_conf             7----------------8-98-7834-----8973678887899997279887756899757537885688


No 45 
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrolase; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.54  E-value=1.7e-07  Score=64.79  Aligned_cols=47  Identities=30%  Similarity=0.434  Sum_probs=32.5

Q ss_pred             CCEEEEEECCCCHHH--HHHHCC--------C-CCCCEEEEECCCHHHHHHCCHHHHH
Q ss_conf             971899987984156--675223--------3-4205999974352422011102433
Q gi|254780214|r   52 SNTTVIVDTGPDFYM--QVLREQ--------V-LSIDAVLYTHPHADHIHGIDGLRGY   98 (271)
Q Consensus        52 ~~~~iLiD~G~d~r~--ql~~~~--------i-~~Id~I~iTH~H~DHi~Gl~~Lr~~   98 (271)
                      .+..++||+|.+...  +.++..        . -+|++||+||.|+||++|...|+.-
T Consensus        50 t~ea~vIDPg~d~~~il~~i~~~~~~~~~~~~~l~l~~ILlTH~H~DHigG~~~L~~~  107 (311)
T 2p18_A           50 THTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAE  107 (311)
T ss_dssp             TTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHH
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
T ss_conf             9979999189861899999999887531123697687998278887225249999998


No 46 
>2yz3_A Metallo-beta-lactamase; enzyme-inhibitor complex, hydrolase; HET: M5P; 2.30A {Pseudomonas putida} SCOP: d.157.1.1
Probab=98.53  E-value=9.5e-08  Score=66.42  Aligned_cols=63  Identities=24%  Similarity=0.338  Sum_probs=42.5

Q ss_pred             CCEEEEEECCCCH--HHHHHH----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC
Q ss_conf             9718999879841--566752----23342059999743524220111024333178211101311202321002
Q gi|254780214|r   52 SNTTVIVDTGPDF--YMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE  120 (271)
Q Consensus        52 ~~~~iLiD~G~d~--r~ql~~----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~  120 (271)
                      ++..+|||+|.+-  ..++++    ..-++|++|++||.|+||++|+..++      +..+++|+.+.+.+.+..
T Consensus        77 ~~~~vlIDtg~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gG~~~~~------~~~~~v~a~~~~~~~~~~  145 (266)
T 2yz3_A           77 GDELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLR------AAGVATYASPSTRRLAEV  145 (266)
T ss_dssp             TTEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHH------HTTCEEEECHHHHHHHHT
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCHHHHH------CCCCEEEEECCHHHHHHH
T ss_conf             999999909999899999999999843997279997999810008755652------069769996202233332


No 47 
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GTT GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.50  E-value=3e-07  Score=63.35  Aligned_cols=55  Identities=24%  Similarity=0.263  Sum_probs=34.8

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCH-HHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHH
Q ss_conf             0699993367789718999879841-566752233420599997435242201110243
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG   97 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~-r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~   97 (271)
                      .|-+|.. .  ..+..++||+|..- ..+.++..--+|.+||+||.|+||+.|...|+.
T Consensus        13 ysYli~d-~--~t~~a~vIDP~~~~~i~~~~~~~~l~l~~Il~TH~H~DHi~g~~~l~~   68 (260)
T 1qh5_A           13 YMYLVID-D--ETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVK   68 (260)
T ss_dssp             EEEEEEE-T--TTTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHH
T ss_pred             EEEEEEE-C--CCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCHHHHCCHHHHHC
T ss_conf             8999998-9--999899990898899999999779968899947898567510443101


No 48 
>2whg_A VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BETA-alpha fold; HET: FLC; 1.90A {Pseudomonas aeruginosa} PDB: 2wrs_A* 1ko3_A 1ko2_A
Probab=98.50  E-value=6.6e-08  Score=67.39  Aligned_cols=63  Identities=24%  Similarity=0.344  Sum_probs=42.4

Q ss_pred             CCEEEEEECCCCHH--HHHHH---C-CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECC
Q ss_conf             97189998798415--66752---2-3342059999743524220111024333178211101311202321002
Q gi|254780214|r   52 SNTTVIVDTGPDFY--MQVLR---E-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE  120 (271)
Q Consensus        52 ~~~~iLiD~G~d~r--~ql~~---~-~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~  120 (271)
                      ++..+|||+|.+..  .++++   . .-++|++|++||.|.||++|+..++      +..+++|+++.+.+.+..
T Consensus        46 ~~~~vlIDtg~~~~~~~~l~~~i~~~~~~~v~~vi~TH~H~DH~gg~~~~~------~~~~~~~~~~~~~~~~~~  114 (230)
T 2whg_A           46 GDELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLR------AAGVATYASPSTRRLAEA  114 (230)
T ss_dssp             TTEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHH------HTTCEEEECHHHHHHHHH
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH------HCCCEEEECHHHHHHHHH
T ss_conf             999999979899799999999999831997389997799820016099997------589949987899999985


No 49 
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.48  E-value=2.5e-07  Score=63.80  Aligned_cols=106  Identities=18%  Similarity=0.185  Sum_probs=56.5

Q ss_pred             CCCEEEEEECCCCHH---HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEE-EECCEEEEEECCCCCCCC
Q ss_conf             897189998798415---6675223342059999743524220111024333178211101-311202321002222101
Q gi|254780214|r   51 GSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV-YAAPDCMKHLFESFRYCF  126 (271)
Q Consensus        51 ~~~~~iLiD~G~d~r---~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~v-y~~~~~~~~l~~~~~y~f  126 (271)
                      .++..++||+|..-.   .++++..--+|.+||+||.|+||+.|...|+..+     +.++ ++.......         
T Consensus        26 ~t~eaivIDP~~~~~~~~~~~i~~~~~~i~~Il~TH~H~DH~~g~~~l~~~~-----~~~~~~~~~~~~~~---------   91 (245)
T 2gcu_A           26 PDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKL-----PGVKSVISKASGSK---------   91 (245)
T ss_dssp             TTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHS-----TTCEEEEEGGGCCC---------
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH-----HCCCCCCCCCCCCC---------
T ss_conf             9998999929987589999999986996789983589768871399999764-----15410001246766---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCCC--------CEEEECCC
Q ss_conf             36677531001232112344333420115874899999950776211233468--------62530323
Q gi|254780214|r  127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--------NVAYCTDV  187 (271)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~--------~~~Y~~Dt  187 (271)
                                  ....++     ....+..+++++..+.++-....++.|.++        +++++|||
T Consensus        92 ------------~d~~~~-----dgd~~~iG~~~l~vi~TPGHT~gsv~~~~~d~~~~~~~~~lFtGDt  143 (245)
T 2gcu_A           92 ------------ADLFLE-----PGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDA  143 (245)
T ss_dssp             ------------CSEEEC-----TTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETT
T ss_pred             ------------CCEEEC-----CCCCCEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCC
T ss_conf             ------------756614-----8872148989999997789886338999436677776637995476


No 50 
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.44  E-value=1e-07  Score=66.19  Aligned_cols=69  Identities=17%  Similarity=0.186  Sum_probs=45.2

Q ss_pred             EEEEEECCCCCCCEEEEEECCC--CHHHHHHHC----CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE
Q ss_conf             6999933677897189998798--415667522----3342059999743524220111024333178211101311202
Q gi|254780214|r   41 SLKISRVSERGSNTTVIVDTGP--DFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC  114 (271)
Q Consensus        41 s~~i~~~~~~~~~~~iLiD~G~--d~r~ql~~~----~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~  114 (271)
                      |.+|.     ++++.+|||+|.  +...+++++    .-++|.+||+||.|.||++|+..++      +..+++|+++.+
T Consensus        29 ~~~i~-----~~~~~iliD~~~~~~~~~~l~~~i~~~~~~~i~~vi~TH~H~DH~~G~~~~~------~~~~~i~~~~~~   97 (223)
T 1m2x_A           29 AVYLV-----TDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFG------KIGAKTYSTKMT   97 (223)
T ss_dssp             EEEEE-----ETTEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHH------HTTCEEEEEHHH
T ss_pred             EEEEE-----ECCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH------HCCCEEEECCCH
T ss_conf             99999-----8998999979999899999999998841997589996799975106199998------689979961204


Q ss_pred             EEEECC
Q ss_conf             321002
Q gi|254780214|r  115 MKHLFE  120 (271)
Q Consensus       115 ~~~l~~  120 (271)
                      .+.+.+
T Consensus        98 ~~~~~~  103 (223)
T 1m2x_A           98 DSILAK  103 (223)
T ss_dssp             HHHHHH
T ss_pred             HHHHHC
T ss_conf             444420


No 51 
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.39  E-value=2e-07  Score=64.43  Aligned_cols=64  Identities=23%  Similarity=0.275  Sum_probs=43.3

Q ss_pred             CCEEEEEECCCCHH--HHHH---HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC
Q ss_conf             97189998798415--6675---2233420599997435242201110243331782111013112023210022
Q gi|254780214|r   52 SNTTVIVDTGPDFY--MQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES  121 (271)
Q Consensus        52 ~~~~iLiD~G~d~r--~ql~---~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~  121 (271)
                      ++..+|||+|.+..  .+++   +..-.+|++||+||.|.||++|+..|.      ...+++|+++.+.+.+.+.
T Consensus        41 ~~~~vliDtg~~~~~~~~~~~~i~~~~~~i~~ii~TH~H~DH~gg~~~l~------~~~~~~~a~~~~~~~~~~~  109 (228)
T 1jjt_A           41 NAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLN------SRSIPTYASELTNELLKKD  109 (228)
T ss_dssp             TTEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHH------HTTCCEEEEHHHHHHHHHT
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHHHH------HCCCCEEECHHHHHHHHHC
T ss_conf             99999997989989999999999965998579997899800108099998------6799888746677777631


No 52 
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.33  E-value=6.5e-07  Score=61.25  Aligned_cols=68  Identities=25%  Similarity=0.352  Sum_probs=42.0

Q ss_pred             CCCEEEEEECCCCHH--HH---HHHC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEE
Q ss_conf             897189998798415--66---7522--33420599997435242201110243331782111013112023210
Q gi|254780214|r   51 GSNTTVIVDTGPDFY--MQ---VLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL  118 (271)
Q Consensus        51 ~~~~~iLiD~G~d~r--~q---l~~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l  118 (271)
                      ++++.|+||+|....  .+   +.+.  +-+.|.+|++||.|.||++|...+..-........+||+++...+..
T Consensus       130 gddG~IVIDtg~s~e~A~aale~~~~~l~~kPV~aVI~TH~H~DH~GGa~~~~e~~~~~~~~~~IiA~~~~~~~~  204 (658)
T 2cfu_A          130 GDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAA  204 (658)
T ss_dssp             CSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHH
T ss_pred             ECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCHHHHH
T ss_conf             399899997999989999999999986579984899989997010574798813542146774289734468997


No 53 
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistance, structure, hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.19  E-value=8.9e-07  Score=60.38  Aligned_cols=62  Identities=18%  Similarity=0.148  Sum_probs=38.5

Q ss_pred             CCEEEEEECCCC-HHHH-HHH---C-CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEEC
Q ss_conf             971899987984-1566-752---2-334205999974352422011102433317821110131120232100
Q gi|254780214|r   52 SNTTVIVDTGPD-FYMQ-VLR---E-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF  119 (271)
Q Consensus        52 ~~~~iLiD~G~d-~r~q-l~~---~-~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~  119 (271)
                      ++..+|+|+|.. ...+ +++   . .-+++++|++||.|.||++|+..++      +...+||+++...+.+.
T Consensus        39 dg~viliD~~~~~~~~~~l~~~~~~~~~~~v~~II~TH~H~DH~Gg~~~~~------~~~~~i~a~~~~~~~~~  106 (246)
T 2fhx_A           39 DGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYK------KMGAETWSSDLTKQLRL  106 (246)
T ss_dssp             TSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHH------HTTCEEEEEHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHC------CCCCEEEECHHHHHHHH
T ss_conf             987999999999899999999999745996699997999965348888852------47965885388889988


No 54 
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 2bfz_A 2bg6_A 2bga_A ...
Probab=98.06  E-value=2.6e-06  Score=57.50  Aligned_cols=66  Identities=27%  Similarity=0.365  Sum_probs=41.5

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCH--HHHHHH----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCE
Q ss_conf             0699993367789718999879841--566752----2334205999974352422011102433317821110131120
Q gi|254780214|r   40 SSLKISRVSERGSNTTVIVDTGPDF--YMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD  113 (271)
Q Consensus        40 ~s~~i~~~~~~~~~~~iLiD~G~d~--r~ql~~----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~  113 (271)
                      .|.+|..     ++..+|||+|.+-  -.++++    ....+|++||+||.|+||++|+..|+      +..++++.+..
T Consensus        42 N~~~I~~-----~~~~vlID~g~~~~~~~~l~~~i~~~~~~~v~~ii~TH~H~DH~gg~~~~~------~~~~~i~~~~~  110 (227)
T 1mqo_A           42 NGLVLNT-----SKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLK------ERGIKAHSTAL  110 (227)
T ss_dssp             EEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHH------HHTCEEECBHH
T ss_pred             EEEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHH------HCCCEEEEECH
T ss_conf             8999997-----999899949899899999999999744998169996789810235399997------47998999410


Q ss_pred             EEE
Q ss_conf             232
Q gi|254780214|r  114 CMK  116 (271)
Q Consensus       114 ~~~  116 (271)
                      +..
T Consensus       111 ~~~  113 (227)
T 1mqo_A          111 TAE  113 (227)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             233


No 55 
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=97.53  E-value=0.00014  Score=46.68  Aligned_cols=104  Identities=6%  Similarity=0.012  Sum_probs=55.0

Q ss_pred             CCEEEEEECCCCHH---HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCC
Q ss_conf             97189998798415---667522334205999974352422011102433317821110131120232100222210136
Q gi|254780214|r   52 SNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA  128 (271)
Q Consensus        52 ~~~~iLiD~G~d~r---~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~  128 (271)
                      ++.++|||+|+...   .++.  .+..+++|++||.  ||+.|+..++.     +...++|+++.....+..        
T Consensus        32 ~~g~vlIDp~~~~~~~~~~l~--~~g~v~~iv~TH~--dH~g~~~~~~~-----~~~a~i~~~~~~~~~~~~--------   94 (201)
T 2p97_A           32 PEGNILIDPVALSNHDWKHLE--SLGGVVWIVLTNS--DHVRSAKEIAD-----QTYTKIAGPVAEKENFPI--------   94 (201)
T ss_dssp             TTCCEEESCCCCCHHHHHHHH--HTTCCSEEECSSG--GGCTTHHHHHH-----HSCCEEEEEGGGTTSCSS--------
T ss_pred             CCEEEEEECCCCCHHHHHHHH--HCCCCEEEEECCH--HHHHHHHHHHH-----HHCCCEEECCCCCCCCCC--------
T ss_conf             998599949988199999998--5699649998888--89889999999-----879909931421333567--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC-CCEEEECCCC
Q ss_conf             67753100123211234433342011587489999995077621123346-8625303233
Q gi|254780214|r  129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCTDVN  188 (271)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~Dt~  188 (271)
                            .+   ...+..     ..... .++++..++-.|.+.. +.|.. +++++++|+-
T Consensus        95 ------~~---d~~~~d-----g~~~~-~g~~vi~~pG~Ht~g~-v~~~~~~~~Lf~GD~l  139 (201)
T 2p97_A           95 ------YC---DRWLSD-----GDELV-PGLKVMELQGSKTPGE-LALLLEETTLITGDLV  139 (201)
T ss_dssp             ------CC---SEEECT-----TCBSS-TTEEEEEECSSSSTTE-EEEEETTTEEEECSSE
T ss_pred             ------CC---CEEECC-----CCEEE-EEEEEEEECCCCCCCC-CCEEECCCEEEECCEE
T ss_conf             ------89---888426-----88865-0179999478889998-4333035639989881


No 56 
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Enterococcus faecalis V583} SCOP: d.157.1.10
Probab=85.02  E-value=0.36  Score=25.51  Aligned_cols=50  Identities=22%  Similarity=0.121  Sum_probs=37.2

Q ss_pred             CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEECCEEEE
Q ss_conf             875799999999997299779997688898888999867998199020448996
Q gi|254780214|r  215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS  268 (271)
Q Consensus       215 ~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~~~~~~~~~~~~v~~A~DGm~i~l  268 (271)
                      -+|.+.+|..++++.++||++++.|=    ++.+..+....++.+..+|-.|+|
T Consensus       380 SgHA~~~eL~~~i~~l~Pk~vipvHg----~~~e~~~~~~~~~~ip~~Ge~i~l  429 (429)
T 2az4_A          380 SGHAIPEDLDKIIALIEPQVLVPIHT----LKPEKLENPYGERILPERGEQIVL  429 (429)
T ss_dssp             CSSCCHHHHHHHHHHHCCSEEEEESC----SCGGGCCCTTSEECCCCTTCEEEC
T ss_pred             ECCCCHHHHHHHHHHHCCCEEEEECC----CCHHHHHCCCCCEEECCCCCEEEC
T ss_conf             07989999999999739899999589----858774185687898699999979


No 57 
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=59.50  E-value=7.9  Score=17.19  Aligned_cols=10  Identities=20%  Similarity=0.179  Sum_probs=6.3

Q ss_pred             CCCCCEEEEE
Q ss_conf             3420599997
Q gi|254780214|r   73 VLSIDAVLYT   82 (271)
Q Consensus        73 i~~Id~I~iT   82 (271)
                      ++++|.|+.+
T Consensus        48 ~~~~D~iih~   57 (178)
T 2kkn_A           48 LKEYDGVIGL   57 (178)
T ss_dssp             GGGCSEEEES
T ss_pred             HCCCCEEEEC
T ss_conf             4478999999


No 58 
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=52.60  E-value=5.2  Score=18.32  Aligned_cols=11  Identities=27%  Similarity=0.558  Sum_probs=8.8

Q ss_pred             EEEEEEEEECC
Q ss_conf             25999985417
Q gi|254780214|r    4 YYHFTILGCGA   14 (271)
Q Consensus         4 ~m~l~~LGtg~   14 (271)
                      .|+|.+||||+
T Consensus         1 Mm~I~Vlg~gC   11 (77)
T 1ilo_A            1 MMKIQIYGTGC   11 (77)
T ss_dssp             CEEEEEECSSS
T ss_pred             CCEEEEECCCC
T ss_conf             95899976999


No 59 
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P)binding protein, rossmann fold; HET: NAP; 2.15A {Streptococcus pyogenes m1 gas} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=42.12  E-value=7.1  Score=17.48  Aligned_cols=13  Identities=23%  Similarity=0.514  Sum_probs=11.6

Q ss_pred             CCEEEEEEEEECC
Q ss_conf             8725999985417
Q gi|254780214|r    2 KDYYHFTILGCGA   14 (271)
Q Consensus         2 ~~~m~l~~LGtg~   14 (271)
                      ++.|||.|+|+|.
T Consensus         1 ~~~MkIg~IG~G~   13 (259)
T 2ahr_A            1 SNAMKIGIIGVGK   13 (259)
T ss_dssp             --CCEEEEECCSH
T ss_pred             CCCCEEEEECCCH
T ss_conf             9988899988849


No 60 
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=39.42  E-value=16  Score=15.22  Aligned_cols=45  Identities=16%  Similarity=0.173  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHCCC--CEEEEECCCCCCCHHHHHHHCCCCCEEEEECC
Q ss_conf             9999999997299--77999768889888899986799819902044
Q gi|254780214|r  220 LSESLKKIELINP--KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM  264 (271)
Q Consensus       220 ~~ea~~~~~~~~~--k~~~LtHls~~~~~~~~~~~~~~~v~~A~DGm  264 (271)
                      ..|.+++.++.++  +|+++.|+.-..+.+...+.+..++.+++||.
T Consensus       199 a~e~l~iL~e~g~~~~rvvi~H~d~~~d~~~~~~~l~~G~~l~fD~~  245 (339)
T 3gtx_A          199 GPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRI  245 (339)
T ss_dssp             HHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCT
T ss_pred             CHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCC
T ss_conf             78999999876999643699804786789999999976938997556


No 61 
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=30.90  E-value=10  Score=16.46  Aligned_cols=20  Identities=30%  Similarity=0.577  Sum_probs=16.4

Q ss_pred             CCCEEEEEEEEECCCCCEECC
Q ss_conf             987259999854178965133
Q gi|254780214|r    1 MKDYYHFTILGCGASLGVPRI   21 (271)
Q Consensus         1 m~~~m~l~~LGtg~s~g~P~~   21 (271)
                      |...|||-|+|.|. .|.|..
T Consensus         1 m~~~MkIg~IGlG~-MG~~mA   20 (301)
T 3cky_A            1 MEKSIKIGFIGLGA-MGKPMA   20 (301)
T ss_dssp             ---CCEEEEECCCT-THHHHH
T ss_pred             CCCCCEEEEEEHHH-HHHHHH
T ss_conf             99889899980278-899999


No 62 
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 2hl1_A*
Probab=30.56  E-value=23  Score=14.33  Aligned_cols=26  Identities=23%  Similarity=0.381  Sum_probs=21.2

Q ss_pred             HHHHHHHHHHCCCCEEEEE---CCCCCCC
Q ss_conf             9999999997299779997---6888988
Q gi|254780214|r  220 LSESLKKIELINPKNAILT---HMHVDLD  245 (271)
Q Consensus       220 ~~ea~~~~~~~~~k~~~Lt---Hls~~~~  245 (271)
                      +++..++++++++++++|.   |+|.++.
T Consensus        61 v~eI~~~a~kv~~~~ivlYPyAHLSs~La   89 (143)
T 2hl0_A           61 IEEISKVAEQVKAENVFVYPFAHLSSELA   89 (143)
T ss_dssp             HHHHHHHHHHHTCCEEEEEECGGGCSSBC
T ss_pred             HHHHHHHHHHCCCCEEEEECCHHCCCCCC
T ss_conf             99999999864998799937111168778


No 63 
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=29.82  E-value=23  Score=14.25  Aligned_cols=68  Identities=13%  Similarity=0.205  Sum_probs=38.4

Q ss_pred             CEEEECCCCCCHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCCHHHHHHHCC
Q ss_conf             625303233001678886222110253023357688757999999999972----997799976888988889998679
Q gi|254780214|r  180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVLKSTP  254 (271)
Q Consensus       180 ~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~----~~k~~~LtHls~~~~~~~~~~~~~  254 (271)
                      ++.|+||-. +-.+....+.+.+++|+|-..+.    -...+-.+.+.+++    .--|+++  ||-.++.+.+.+.++
T Consensus       157 ~i~y~T~g~-lLr~~~~~L~~~s~IIiDEvHER----s~~tD~lL~llk~~~~~~~~lklIl--mSATld~~~f~~yF~  228 (235)
T 3llm_A          157 SIMFCTVGV-LLRKLEAGIRGISHVIVDEIHER----DINTDFLLVVLRDVVQAYPEVRIVL--MSATIDTSMFCEYFF  228 (235)
T ss_dssp             EEEEEEHHH-HHHHHHHCCTTCCEEEECCTTSC----CHHHHHHHHHHHHHHHHCTTSEEEE--EECSSCCHHHHHHTT
T ss_pred             EEEECCCCE-EEECCCCCCCCCCCEECCHHHHC----CHHHHHHHHHHHHHHHHCCCCEEEE--ECCCCCHHHHHHHCC
T ss_conf             478603020-00011034555312000057644----6138999999999997789967999--768789699998769


No 64 
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initiative; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=28.52  E-value=17  Score=15.07  Aligned_cols=20  Identities=20%  Similarity=0.416  Sum_probs=15.8

Q ss_pred             CCCEEEEEEEEECCCCCEECC
Q ss_conf             987259999854178965133
Q gi|254780214|r    1 MKDYYHFTILGCGASLGVPRI   21 (271)
Q Consensus         1 m~~~m~l~~LGtg~s~g~P~~   21 (271)
                      |+..|||+|.|.|+ .++|..
T Consensus         4 m~k~~KI~iIGaGS-~~~~~~   23 (450)
T 1s6y_A            4 MDKRLKIATIGGGS-SYTPEL   23 (450)
T ss_dssp             ---CEEEEEETTTC-TTHHHH
T ss_pred             CCCCCEEEEECCCH-HHHHHH
T ss_conf             76788699999875-678999


No 65 
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.50A {Geobacter metallireducens gs-15}
Probab=27.05  E-value=15  Score=15.54  Aligned_cols=14  Identities=36%  Similarity=0.525  Sum_probs=11.2

Q ss_pred             CCCEEEEEEEEECCCC
Q ss_conf             9872599998541789
Q gi|254780214|r    1 MKDYYHFTILGCGASL   16 (271)
Q Consensus         1 m~~~m~l~~LGtg~s~   16 (271)
                      |+  |||.++|.|+-+
T Consensus         1 m~--MkI~ViGaGaiG   14 (312)
T 3hn2_A            1 MS--LRIAIVGAGALG   14 (312)
T ss_dssp             -----CEEEECCSTTH
T ss_pred             CC--CEEEEECCCHHH
T ss_conf             98--889999928999


No 66 
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoreductase, structural genomics consortium; HET: NAP; 2.30A {Plasmodium falciparum 3D7}
Probab=24.82  E-value=19  Score=14.89  Aligned_cols=12  Identities=17%  Similarity=0.484  Sum_probs=10.0

Q ss_pred             CEEEEEEEEECC
Q ss_conf             725999985417
Q gi|254780214|r    3 DYYHFTILGCGA   14 (271)
Q Consensus         3 ~~m~l~~LGtg~   14 (271)
                      +.|||-|+|+|.
T Consensus         3 ~~MkIgfIG~G~   14 (262)
T 2rcy_A            3 ENIKLGFMGLGQ   14 (262)
T ss_dssp             SSSCEEEECCSH
T ss_pred             CCCEEEEECCCH
T ss_conf             888899988689


No 67 
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=24.60  E-value=19  Score=14.86  Aligned_cols=14  Identities=29%  Similarity=0.444  Sum_probs=11.1

Q ss_pred             CCCEEEEEEEEECCCC
Q ss_conf             9872599998541789
Q gi|254780214|r    1 MKDYYHFTILGCGASL   16 (271)
Q Consensus         1 m~~~m~l~~LGtg~s~   16 (271)
                      |+  |||.++|.|+-+
T Consensus         1 m~--MkI~IiGaGaiG   14 (307)
T 3ego_A            1 MS--LKIGIIGGGSVG   14 (307)
T ss_dssp             -C--CEEEEECCSHHH
T ss_pred             CC--CEEEEECCCHHH
T ss_conf             99--889999965999


No 68 
>2azn_A HTP reductase, putative 5-amino-6-(5-phosphoribosylamino)uracil reductase; oxidoreductase; HET: MA5 NAP EPE; 2.70A {Methanocaldococcus jannaschii} SCOP: c.71.1.2
Probab=23.85  E-value=30  Score=13.58  Aligned_cols=21  Identities=14%  Similarity=0.121  Sum_probs=9.6

Q ss_pred             CCCHHHHHHHHHHCCCCEEEE
Q ss_conf             579999999999729977999
Q gi|254780214|r  217 HFSLSESLKKIELINPKNAIL  237 (271)
Q Consensus       217 H~~~~ea~~~~~~~~~k~~~L  237 (271)
                      +.++.++++...+.+.+++++
T Consensus       128 ~~dl~~~l~~L~~~g~~~vlv  148 (219)
T 2azn_A          128 KVDLKKLMDILYDKGIKSILL  148 (219)
T ss_dssp             SCCHHHHHHHHHHTTCCEEEE
T ss_pred             CCCHHHHHHHHHHCCCCEEEE
T ss_conf             879999999998779978998


No 69 
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A*
Probab=22.29  E-value=31  Score=13.54  Aligned_cols=19  Identities=5%  Similarity=0.209  Sum_probs=14.0

Q ss_pred             CCEEEEEEEEECCCCCEECC
Q ss_conf             87259999854178965133
Q gi|254780214|r    2 KDYYHFTILGCGASLGVPRI   21 (271)
Q Consensus         2 ~~~m~l~~LGtg~s~g~P~~   21 (271)
                      |+.|||.|+||. .+++|.+
T Consensus         1 ~~~mkI~f~Gs~-~~a~~~L   19 (314)
T 1fmt_A            1 SESLRIIFAGTP-DFAARHL   19 (314)
T ss_dssp             CCCCEEEEEECS-HHHHHHH
T ss_pred             CCCCEEEEECCC-HHHHHHH
T ss_conf             996289998898-8999999


No 70 
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.16  E-value=32  Score=13.37  Aligned_cols=27  Identities=19%  Similarity=0.287  Sum_probs=14.7

Q ss_pred             CCCHHHHHHHHHHCCCCE-EEEECCCCC
Q ss_conf             579999999999729977-999768889
Q gi|254780214|r  217 HFSLSESLKKIELINPKN-AILTHMHVD  243 (271)
Q Consensus       217 H~~~~ea~~~~~~~~~k~-~~LtHls~~  243 (271)
                      ..+.++.+++.-++-.|. .+|--+.++
T Consensus       293 ~kS~~eLi~~l~~sVsknGNLLLNVgP~  320 (443)
T 3gza_A          293 IYPLNTLMDKYEKSVGRNATLILGLTPD  320 (443)
T ss_dssp             SCCHHHHHHHHHTTTTBTCEEEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             2899999999999967797699812868


No 71 
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Porphyromonas gingivalis W83}
Probab=21.44  E-value=25  Score=14.07  Aligned_cols=16  Identities=19%  Similarity=0.370  Sum_probs=12.3

Q ss_pred             CCCE-EEEEEEEECCCC
Q ss_conf             9872-599998541789
Q gi|254780214|r    1 MKDY-YHFTILGCGASL   16 (271)
Q Consensus         1 m~~~-m~l~~LGtg~s~   16 (271)
                      |+.. |||.++|.|+-+
T Consensus         4 ~~~~~MkI~IlGaGaiG   20 (317)
T 2qyt_A            4 MNQQPIKIAVFGLGGVG   20 (317)
T ss_dssp             ---CCEEEEEECCSHHH
T ss_pred             CCCCCCEEEEECCCHHH
T ss_conf             78999989999968999


Done!