Query gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] Match_columns 271 No_of_seqs 173 out of 2320 Neff 8.4 Searched_HMMs 13730 Date Mon May 23 18:17:15 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780214.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1xtoa_ d.157.1.6 (A:) Coenzym 100.0 0 0 347.8 13.1 250 5-268 1-303 (304) 2 d1y44a1 d.157.1.7 (A:1-307) Ri 100.0 1.3E-44 0 294.1 17.5 236 5-270 1-306 (307) 3 d2cbna1 d.157.1.7 (A:1-305) Ri 100.0 6E-44 0 290.0 17.3 235 5-268 1-305 (305) 4 d1zkpa1 d.157.1.9 (A:1-244) Hy 100.0 3.6E-40 2.7E-44 266.5 17.9 224 5-267 1-243 (244) 5 d2e7ya1 d.157.1.7 (A:1-280) Ri 100.0 4.5E-29 3.2E-33 197.5 12.7 216 40-268 11-280 (280) 6 d2dkfa1 d.157.1.10 (A:1-431) P 99.8 2E-21 1.5E-25 149.9 5.4 176 5-211 1-190 (431) 7 d2az4a1 d.157.1.10 (A:56-238) 99.8 1.1E-20 7.8E-25 145.4 -1.3 147 55-211 9-165 (183) 8 d2i7ta1 d.157.1.10 (A:9-459) C 99.7 3E-17 2.2E-21 124.0 8.2 156 2-187 1-172 (451) 9 d2i7xa1 d.157.1.10 (A:1-422,A: 99.6 2.5E-16 1.8E-20 118.3 7.5 144 40-189 16-182 (514) 10 d1vjna_ d.157.1.4 (A:) Hypothe 99.5 2.7E-13 2E-17 99.4 14.2 154 4-242 1-165 (209) 11 d1wraa1 d.157.1.8 (A:30-334) T 99.3 8.2E-13 5.9E-17 96.4 6.5 82 4-116 1-110 (305) 12 d1ztca1 d.157.1.11 (A:1-207) H 99.3 3.4E-12 2.5E-16 92.5 6.1 73 5-94 1-80 (207) 13 d2aioa1 d.157.1.1 (A:23-311) Z 99.1 8.2E-11 6E-15 84.0 6.2 72 40-121 38-116 (266) 14 d1k07a_ d.157.1.1 (A:) Zn meta 99.0 8.9E-10 6.5E-14 77.6 8.2 73 40-122 25-104 (262) 15 d2gmna1 d.157.1.1 (A:29-292) Z 99.0 3.7E-10 2.7E-14 79.9 5.9 73 40-122 28-107 (264) 16 d1p9ea_ d.157.1.5 (A:) Methyl 99.0 1.7E-10 1.2E-14 82.0 3.9 50 41-95 64-124 (294) 17 d1x8ha_ d.157.1.1 (A:) Zn meta 98.8 6.4E-10 4.7E-14 78.4 2.4 65 51-121 30-100 (228) 18 d1vmea2 d.157.1.3 (A:1-250) RO 98.8 1.1E-09 8E-14 77.0 2.0 72 41-120 42-119 (250) 19 d2q0ia1 d.157.1.14 (A:1-298) Q 98.7 1.3E-08 9.3E-13 70.4 7.3 64 52-119 31-101 (298) 20 d1ycga2 d.157.1.3 (A:2-250) Ni 98.7 3.9E-09 2.8E-13 73.6 4.2 65 53-121 44-114 (249) 21 d1e5da2 d.157.1.3 (A:2-250) Ru 98.6 9.9E-09 7.2E-13 71.1 4.2 63 53-119 42-110 (249) 22 d1qh5a_ d.157.1.2 (A:) Glyoxal 98.6 5E-08 3.7E-12 66.7 6.5 46 52-97 22-68 (260) 23 d2qeda1 d.157.1.2 (A:1-251) Gl 98.6 3E-08 2.2E-12 68.1 5.2 115 40-187 13-128 (251) 24 d1xm8a_ d.157.1.2 (A:) Glyoxal 98.5 2.5E-07 1.8E-11 62.3 7.8 108 52-187 22-132 (254) 25 d1znba_ d.157.1.1 (A:) Zn meta 98.5 5.7E-08 4.1E-12 66.3 4.0 60 51-116 42-107 (230) 26 d1m2xa_ d.157.1.1 (A:) Zn meta 98.4 7.1E-08 5.1E-12 65.7 4.1 68 41-119 29-102 (219) 27 d1ko3a_ d.157.1.1 (A:) Zn meta 98.4 1E-07 7.5E-12 64.7 4.2 68 41-119 40-113 (230) 28 d1mqoa_ d.157.1.1 (A:) Zn meta 98.4 4.4E-07 3.2E-11 60.8 6.7 66 41-117 37-108 (221) 29 d2cfua2 d.157.1.13 (A:20-524) 98.3 4.8E-07 3.5E-11 60.6 5.4 68 51-118 111-185 (505) 30 d1jjta_ d.157.1.1 (A:) Zn meta 98.2 3.1E-07 2.3E-11 61.7 3.5 64 52-121 39-107 (220) 31 d2p97a1 d.157.1.12 (A:1-200) H 97.7 2.1E-05 1.6E-09 50.3 5.3 57 52-116 31-89 (200) 32 d1iloa_ c.47.1.1 (A:) MTH985, 45.4 4.5 0.00033 17.2 1.7 11 4-14 1-11 (77) 33 d1fmta2 c.65.1.1 (A:1-206) Met 30.1 10 0.00075 15.0 1.6 13 2-14 1-13 (206) 34 d1vjta1 c.2.1.5 (A:-1-191) Put 28.8 8.9 0.00065 15.4 1.0 15 4-19 2-16 (193) 35 d1ir6a_ c.107.1.2 (A:) Exonucl 28.7 13 0.00092 14.4 1.8 33 53-86 82-114 (385) 36 d1ez4a1 c.2.1.5 (A:16-162) Lac 23.6 14 0.001 14.2 1.3 14 1-14 2-15 (146) 37 d1txga2 c.2.1.6 (A:1-180) Glyc 23.6 11 0.00078 14.9 0.7 10 5-14 1-10 (180) 38 d1b9ra_ d.15.4.1 (A:) 2Fe-2S f 21.5 13 0.00097 14.3 0.8 11 261-271 94-104 (105) 39 d2atza1 d.264.1.3 (A:3-178) Hy 21.3 18 0.0013 13.5 1.4 18 214-231 116-133 (176) 40 d1nvmb1 c.2.1.3 (B:1-131,B:287 20.5 20 0.0015 13.2 1.7 15 1-15 1-15 (157) No 1 >d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Probab=100.00 E-value=0 Score=347.80 Aligned_cols=250 Identities=19% Similarity=0.212 Sum_probs=190.0 Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCC----CCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHC--------- Q ss_conf 5999985417896513378878777787----677444306999933677897189998798415667522--------- Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--------- 71 (271) Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~----~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~--------- 71 (271) |||||||||+|+|+|+++|+|++|++|| |+++|+++|++|...+ +.++|||||+|++.|+++. T Consensus 1 M~~~~LGtg~~~g~P~~~c~c~~C~~ar~~~~p~~~R~~ss~~i~~~g----~~~lLiD~G~~~~~ql~~~~~~~~~~~~ 76 (304) T d1xtoa_ 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDG----VHWILCNASPDIRAQLQAFAPMQPARAL 76 (304) T ss_dssp CEEEEEECBCTTCBSCTTCCSHHHHHHHTTCSCCCCBCBCEEEEESSS----SSEEEESCCTTHHHHHHTCGGGCCCSSS T ss_pred CEEEEEEEECCCCEECCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECC----CEEEEEECCCHHHHHHHHHHHHHHHCCC T ss_conf 989999871789710489888646022247777775344179999689----8599996880499999860233110135 Q ss_pred CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33420599997435242201110243331782111013112023210022221013667753100123211234433342 Q gi|254780214|r 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 (271) Q Consensus 72 ~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271) ++++||+|||||+|.||+.||+.|+ +..++++|+++.+.......+.+.+......... ....+.... .. T Consensus 77 ~~~~i~~I~iTH~H~DH~~GL~~l~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~ 146 (304) T d1xtoa_ 77 RDTGINAIVLLDSQIDHTTGLLSLR-----EGCPHQVWCTDMVHQDLTTGFPLFNMLSHWNGGL---QWNRIELEG--SF 146 (304) T ss_dssp SCCSEEEEECSCCCHHHHGGGGGGG-----GGCCEEEEECHHHHHHTTTTSCHHHHHTTSTTCE---EEEECCSSS--CB T ss_pred CCCCCEEEEEECCCCCEEHHHHHHH-----HHCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCC---CEEEEECCC--CE T ss_conf 7766339998368747210489986-----5304661015023222230443201102346754---202441367--53 Q ss_pred EECCCCCEEEEEEEEECCCEE------------CCCCCC------CCEEEECCCCCCHHHHHHHHCCHHEEEEECCC--- Q ss_conf 011587489999995077621------------123346------86253032330016788862221102530233--- Q gi|254780214|r 152 MKSAGGVIEAIPILQQHGRIS------------SLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--- 210 (271) Q Consensus 152 ~~~~~~~i~i~~~~~~Hg~~~------------~~Gyri------~~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~--- 210 (271) .......++++++++.|+... +.+|++ ++++|.+|+..+++..+...+++|++++|++. T Consensus 147 ~i~~~~~~~i~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (304) T d1xtoa_ 147 VIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWED 226 (304) T ss_dssp CCTTCTTEEEEEEECCCCCCTTSTTTTSCCTTSSEEEEEEETTTCCEEEEESCCSCCCHHHHHHHTTCSEEEEECCCSST T ss_pred EECCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHCCC T ss_conf 44057983796665213465422100134555204689714421242112553113102333332122001124330331 Q ss_pred --------------CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC-----HHHHHHHCCCCCEEEEECCEEEE Q ss_conf --------------57688757999999999972997799976888988-----88999867998199020448996 Q gi|254780214|r 211 --------------NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQFSS 268 (271) Q Consensus 211 --------------~~~~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~-----~~~~~~~~~~~v~~A~DGm~i~l 268 (271) ...+.+|+|++||+++++++++|+++||||||+.. .++.++..+.+|.+|||||+|+| T Consensus 227 ~~~~~~~~~~~~~~~~~~~~H~t~~ea~~~~~~~~~k~lvLtH~sh~~p~~~~~~~~~~~~~~~gi~vA~DGm~i~L 303 (304) T d1xtoa_ 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRRGVEVAFDGMSIEL 303 (304) T ss_dssp THHHHHTSCSCCSSSSSCCCSSSSSSHHHHGGGCCSSEEEEESBCTTCGGGSTTCHHHHHHHHTTEEECCTTCEEEC T ss_pred HHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCEEEE T ss_conf 33201344320121058888899999999998579980999935999845461879998776379499047989995 No 2 >d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Probab=100.00 E-value=1.3e-44 Score=294.08 Aligned_cols=236 Identities=19% Similarity=0.280 Sum_probs=167.9 Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCC--CCCCEEEEE Q ss_conf 599998541789651337887877778767744430699993367789718999879841566752233--420599997 Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYT 82 (271) Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i--~~Id~I~iT 82 (271) |||+|||||++ +|.. .|..||.++.... .++..||||||++++.||++.++ ++||+|||| T Consensus 1 Mki~~LGtg~~--~p~~--------------~r~~s~~~v~~~~--~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~I~iT 62 (307) T d1y44a1 1 MELLFLGTGAG--IPAK--------------ARNVTSVALKLLE--ERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFIT 62 (307) T ss_dssp CEEEEEECBSS--SCCS--------------SCCBCEEEEEETT--TTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECS T ss_pred CEEEEEEECCC--CCCC--------------CCCCCEEEEEEEC--CCCCEEEEECCHHHHHHHHHCCCCHHHCCEEEEC T ss_conf 98999952799--6899--------------9976889999981--6997899939678999999829996577789981 Q ss_pred CCCHHHHHHCCHHHH--HHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEE Q ss_conf 435242201110243--331782111013112023210022221013667753100123211234433342011587489 Q gi|254780214|r 83 HPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 (271) Q Consensus 83 H~H~DHi~Gl~~Lr~--~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (271) |+|+||+.||+.|.. +...+++++.||+|+...+.++..+.+....... .+...+......+....++ T Consensus 63 H~H~DH~~Gl~~ll~~~~~~~~~~~l~i~gP~~~~~~l~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~ 132 (307) T d1y44a1 63 HMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTY----------PLAIQEIEEGIVFEDDQFI 132 (307) T ss_dssp BCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSS----------CEEEEECCSEEEEECSSEE T ss_pred CCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC----------CEEEEECCCCCEEECCCCE T ss_conf 564676164212212210257887642247830467899876310135676----------2367985688357416706 Q ss_pred EEEEEEECCCEECCCCCC------------------------------------------------------CCEEEECC Q ss_conf 999995077621123346------------------------------------------------------86253032 Q gi|254780214|r 161 AIPILQQHGRISSLGFRF------------------------------------------------------GNVAYCTD 186 (271) Q Consensus 161 i~~~~~~Hg~~~~~Gyri------------------------------------------------------~~~~Y~~D 186 (271) ++++++.|. .++.||++ .+++|++| T Consensus 133 v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~g~~~~~sgD 211 (307) T d1y44a1 133 VTAVSVIHG-VEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGD 211 (307) T ss_dssp EEEEECBSS-SSBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCS T ss_pred EEEEEECCC-CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCCC T ss_conf 877530356-6643432201356663025455432898741000135643899855677601203301235443333665 Q ss_pred CCCCHHHHHHHHCCHHEEEEECCCCCCC------CCCCCHHHHHHHHHHCCCCEEEEECCCCCCC---HHHHH---HHCC Q ss_conf 3300167888622211025302335768------8757999999999972997799976888988---88999---8679 Q gi|254780214|r 187 VNAFPAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLD---YDMVL---KSTP 254 (271) Q Consensus 187 t~~~~e~~~~~l~~~D~lI~d~l~~~~~------~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~---~~~~~---~~~~ 254 (271) |. +++++.++++++|+||+||+..... ++|+|++||+++++++++|+++|||+++... ..++. +... T Consensus 212 t~-~~~~l~~~~~~~DlLi~E~~~~~~~~~~a~~~~H~t~~~a~~~a~~~~~k~lvltH~s~r~~~~~~~~~~~e~~~~~ 290 (307) T d1y44a1 212 TR-VSDKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVF 290 (307) T ss_dssp CB-CCHHHHHHTTTCSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHC T ss_pred CC-CHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC T ss_conf 54-20778876327866887424440445531057999999999999985998899989583558840899999999878 Q ss_pred CCCEEEEECCEEEEEC Q ss_conf 9819902044899626 Q gi|254780214|r 255 SRVVPAFDGMQFSSPI 270 (271) Q Consensus 255 ~~v~~A~DGm~i~l~~ 270 (271) .|+.+|+|||+|+||- T Consensus 291 ~~~~~a~Dg~~i~i~~ 306 (307) T d1y44a1 291 PNSVAAYDFLEVNVPR 306 (307) T ss_dssp SSEEECCTTCEEECCC T ss_pred CCCEECCCCCEEECCC T ss_conf 9909945898896589 No 3 >d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=6e-44 Score=289.97 Aligned_cols=235 Identities=17% Similarity=0.216 Sum_probs=169.5 Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCC--CCCEEEEE Q ss_conf 5999985417896513378878777787677444306999933677897189998798415667522334--20599997 Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYT 82 (271) Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~--~Id~I~iT 82 (271) |||+|||||++ +|.. .|..||++|+.... .++.++|||||++++.||.+.+++ +||+|||| T Consensus 1 m~l~~LGtg~~--~p~~--------------~r~~s~~li~~~~~-~~~~~iL~DcG~g~~~~l~~~~~~~~~i~~IfiT 63 (305) T d2cbna1 1 MNLIFLGTSAG--VPTR--------------TRNVTAILLNLQHP-TQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFIS 63 (305) T ss_dssp CEEEEEECBSS--SCCS--------------SCCBCEEEEECCCS-SCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECS T ss_pred CEEEEECCCCC--CCCC--------------CCCCCEEEEEEECC-CCCCEEEEECCHHHHHHHHHHCCCHHHCCEEEEC T ss_conf 98999856899--7899--------------99658899997168-8994899969668999999819997888589974 Q ss_pred CCCHHHHHHCCHHHH--HHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEE Q ss_conf 435242201110243--331782111013112023210022221013667753100123211234433342011587489 Q gi|254780214|r 83 HPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 (271) Q Consensus 83 H~H~DHi~Gl~~Lr~--~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (271) |+|+||++||+.|.. +...+.+++.||+|+++.+.++..+.+..... ....+..+.........+.++ T Consensus 64 H~H~DHi~Gl~~ll~~~~~~~~~~~l~i~gP~~~~~~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 133 (305) T d2cbna1 64 HLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWT----------DYPLEIVEIGAGEILDDGLRK 133 (305) T ss_dssp CCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCC----------SSCEEEEECCSEEEEECSSEE T ss_pred CCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC----------CCCCEEEECCCCCCEECCCEE T ss_conf 5457883742335444420677643324587448999999865420233----------454023212355411012236 Q ss_pred EEEEEEECCCEECCCCCC------------------------------------------------------CCEEEECC Q ss_conf 999995077621123346------------------------------------------------------86253032 Q gi|254780214|r 161 AIPILQQHGRISSLGFRF------------------------------------------------------GNVAYCTD 186 (271) Q Consensus 161 i~~~~~~Hg~~~~~Gyri------------------------------------------------------~~~~Y~~D 186 (271) +.+++..|. .++.+|++ .+++|++| T Consensus 134 v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~sgD 212 (305) T d2cbna1 134 VTAYPLEHP-LECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGD 212 (305) T ss_dssp EEEEECBSS-SCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCS T ss_pred EEEEECCCC-CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEEEEEEECEEEEECCCCCCCCCCCEEECCCC T ss_conf 776530455-5543432234567764206566642899730455447633899951204410100035643210101222 Q ss_pred CCCCHHHHHHHHCCHHEEEEECCCCCC------CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHH---H---HHHCC Q ss_conf 330016788862221102530233576------88757999999999972997799976888988889---9---98679 Q gi|254780214|r 187 VNAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM---V---LKSTP 254 (271) Q Consensus 187 t~~~~e~~~~~l~~~D~lI~d~l~~~~------~~~H~~~~ea~~~~~~~~~k~~~LtHls~~~~~~~---~---~~~~~ 254 (271) |.. ++...++++++|+||+||+.... .++|++++||+++|+++++|+++|||+|+..+..+ + .+... T Consensus 213 t~~-~~~l~~~~~~~d~LI~E~t~~~~~~~~a~~~~H~t~~~~~~la~~~~~k~lvltH~s~~~~~~~~~~~~~e~~~~~ 291 (305) T d2cbna1 213 TGP-CDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIF 291 (305) T ss_dssp CBS-CSTHHHHHTTCSEEEEECCBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTC T ss_pred CCC-CHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC T ss_conf 477-6568887624410223144535566353579999999999999984999899989884778604999999999878 Q ss_pred CCCEEEEECCEEEE Q ss_conf 98199020448996 Q gi|254780214|r 255 SRVVPAFDGMQFSS 268 (271) Q Consensus 255 ~~v~~A~DGm~i~l 268 (271) .|+.+|+|||+|+| T Consensus 292 ~~~~~a~Dg~~i~i 305 (305) T d2cbna1 292 PATELANDFTVFNV 305 (305) T ss_dssp SCEEECCTTCEEEC T ss_pred CCEEECCCCCEEEC T ss_conf 99498679989979 No 4 >d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Probab=100.00 E-value=3.6e-40 Score=266.46 Aligned_cols=224 Identities=18% Similarity=0.187 Sum_probs=168.4 Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHC-CCCCCCEEEEEC Q ss_conf 5999985417896513378878777787677444306999933677897189998798415667522-334205999974 Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTH 83 (271) Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~-~i~~Id~I~iTH 83 (271) |||||||||+ |.|..+ |+.||++|+. +++++|||||++++.|+.+. ++.+||+||+|| T Consensus 1 M~l~~LG~~~--~~p~~~--------------~~~s~~lv~~-----~~~~iLID~G~~~~~~l~~~~~~~~id~i~iTH 59 (244) T d1zkpa1 1 MKMTVVGFWG--GFPEAG--------------EATSGYLFEH-----DGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSH 59 (244) T ss_dssp EEEEEEECBS--SSCCTT--------------CCBSEEEEEE-----TTEEEEECCCTTHHHHHTTTCCGGGCCEEECSC T ss_pred CEEEEEEECC--CCCCCC--------------CCCCEEEEEE-----CCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEC T ss_conf 9899995089--968989--------------9727799999-----993999927974999998616986573489623 Q ss_pred CCHHHHHHCCHHHHH------HHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC Q ss_conf 352422011102433------31782111013112023210022221013667753100123211234433342011587 Q gi|254780214|r 84 PHADHIHGIDGLRGY------FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 (271) Q Consensus 84 ~H~DHi~Gl~~Lr~~------~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271) .|.||+.|++.|+.+ ......+++||++....+.+..... . +.... ...........+ T Consensus 60 ~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~-------~~~~~-----~~~~~~~~~~~~ 123 (244) T d1zkpa1 60 YHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTH----E-------PHTKG-----IPYNPEETLQIG 123 (244) T ss_dssp CCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTCB----T-------TTEEE-----EECCTTSCEEET T ss_pred CCCCCCCCHHHHHHHHEECCCCCCCCCCCEEEECHHHHHHHHHHCC----C-------CCCCC-----EECCCCEEEEEE T ss_conf 5643227621211231320223577888416632666767644213----4-------43221-----102662379972 Q ss_pred CEEEEEEEEECCCEECCCCCCC----CEEEECCCCCCHHHHHHHHCCHHEEEEECCCCC----CCCCCCCHHHHHHHHHH Q ss_conf 4899999950776211233468----625303233001678886222110253023357----68875799999999997 Q gi|254780214|r 158 VIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIEL 229 (271) Q Consensus 158 ~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~----~~~~H~~~~ea~~~~~~ 229 (271) +++++++++.|+ .+++||+|. +++|++|+.+ .++..++++++|+||+||.... ...+|++.+|+++++++ T Consensus 124 ~~~v~~~~~~h~-~~~~~~~i~~~~~~~~~~gDt~~-~~~~~~~~~~~D~li~e~~~~~~~~~~~~~H~~~~e~~~~~~~ 201 (244) T d1zkpa1 124 PFSISFLKTVHP-VTCFAMRITAGNDIVVYSADSSY-IPEFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKD 201 (244) T ss_dssp TEEEEEEECCSS-SCCEEEEEEETTEEEEECCSCCC-CTTHHHHHTTCSEEEEECCBCTTSCCGGGTCCBHHHHHHHHHH T ss_pred CCCEEEEEECCC-CCCCCEEECCCCCCCCCCCCCCC-CCHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHH T ss_conf 021024540256-54210010123221010123554-3013555414522687503421121201158999999999998 Q ss_pred CCCCEEEEECCCCCCCHHH----HHHHCCCCCEEEEECCEEE Q ss_conf 2997799976888988889----9986799819902044899 Q gi|254780214|r 230 INPKNAILTHMHVDLDYDM----VLKSTPSRVVPAFDGMQFS 267 (271) Q Consensus 230 ~~~k~~~LtHls~~~~~~~----~~~~~~~~v~~A~DGm~i~ 267 (271) ++||+++|||+++..+..+ +++.++.+|.+|+|||+++ T Consensus 202 ~~~k~~vl~H~~~~~~~~~~~~~~~~~~~~~v~~a~dG~~~~ 243 (244) T d1zkpa1 202 ANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWN 243 (244) T ss_dssp TTCSEEEEESBCSSSCTHHHHHHHHTTCCSEEEECCTTCEEE T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEE T ss_conf 097989998989879999999999986699999925997843 No 5 >d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Probab=99.96 E-value=4.5e-29 Score=197.53 Aligned_cols=216 Identities=18% Similarity=0.193 Sum_probs=138.0 Q ss_pred CEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHH----HHHCCCCEEEEEECCEEE Q ss_conf 0699993367789718999879841566752233420599997435242201110243----331782111013112023 Q gi|254780214|r 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG----YFLKQKRPIDVYAAPDCM 115 (271) Q Consensus 40 ~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~----~~~~~~~~i~vy~~~~~~ 115 (271) .|.+|.+. +.+||||||++++.|| +..+.+||+|||||.|+||++||+.|.. ....+.+++.+|+|+.+. T Consensus 11 ~~t~~~~~-----~~~iLiD~G~g~~~~l-~~~~~~i~~I~ITH~H~DHi~GLp~l~~~~~~~~~~~~~~~~~~~p~~~~ 84 (280) T d2e7ya1 11 FSTWIYYS-----PERILFDAGEGVSTTL-GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR 84 (280) T ss_dssp TEEEEEEG-----GGTEEEEECTTHHHHH-GGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH T ss_pred CEEEEEEC-----CCEEEEECCHHHHHHH-HHCCCCCCEEEEECCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHH T ss_conf 57999989-----9889998975499996-00402387899946855663672788876410124787662204726799 Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECC-CEECCCCCCC--------------- Q ss_conf 210022221013667753100123211234433342011587489999995077-6211233468--------------- Q gi|254780214|r 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFG--------------- 179 (271) Q Consensus 116 ~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg-~~~~~Gyri~--------------- 179 (271) ...+... .+........ .......++..............+++.++.++|. ..+++||++. T Consensus 85 ~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (280) T d2e7ya1 85 AVEEYTE-FIKRANPDLR--FSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDS 161 (280) T ss_dssp HHHHHHH-HHHHHCGGGT--TTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGGTTCCH T ss_pred HHHHHHH-HHHHCCCCCC--CCEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCC T ss_conf 9999999-9752034545--430010001353023013555643799987224577664006971165330000035662 Q ss_pred ----------------------CEEEECCCCCCHHHHHHHHCCHHEEEEECCCCC----CCCCCCCHHHHHHHHHHCCCC Q ss_conf ----------------------625303233001678886222110253023357----688757999999999972997 Q gi|254780214|r 180 ----------------------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIELINPK 233 (271) Q Consensus 180 ----------------------~~~Y~~Dt~~~~e~~~~~l~~~D~lI~d~l~~~----~~~~H~~~~ea~~~~~~~~~k 233 (271) .++|++|+...+ . +.++++|+||+||+... ..++|++++|++++++++++| T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~-~--~~~~~~d~li~e~~~~~~~~~~~~~H~t~~e~~~la~~~~~k 238 (280) T d2e7ya1 162 KEISRLVKEKGRDFVTEEYHKKVLTISGDSLALD-P--EEIRGTELLIHECTFLDARDRRYKNHAAIDEVMESVKAAGVK 238 (280) T ss_dssp HHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSCC-H--HHHTTCSCEEEECCBC--------CCCBHHHHHHHHHHHTCC T ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC-H--HHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCCC T ss_conf 3332233424742222235785455248766785-7--887058858986022157776540489999999999985999 Q ss_pred EEEEECCCCCCC------HHHHHHHCCCCCEEEE--ECCEEEE Q ss_conf 799976888988------8899986799819902--0448996 Q gi|254780214|r 234 NAILTHMHVDLD------YDMVLKSTPSRVVPAF--DGMQFSS 268 (271) Q Consensus 234 ~~~LtHls~~~~------~~~~~~~~~~~v~~A~--DGm~i~l 268 (271) +++|||+|+... .+++++++| |+.+.| ||.+|++ T Consensus 239 ~lvltH~s~ry~~~~~~~~~~~~~~~p-~~~i~~~~~~~~f~~ 280 (280) T d2e7ya1 239 KVILYHISTRYIRQLKSVIKKYREEMP-DVEILYMDPRKVFEM 280 (280) T ss_dssp EEEEESCCGGGHHHHHHHHHHHHHHCT-TSEEEECCTTSCEEC T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCC-CCEEEECCCCCEEEC T ss_conf 999993680127569999999997689-988998799987859 No 6 >d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Probab=99.83 E-value=2e-21 Score=149.93 Aligned_cols=176 Identities=17% Similarity=0.131 Sum_probs=105.7 Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHH----HHH--HHCCCCCCCE Q ss_conf 5999985417896513378878777787677444306999933677897189998798415----667--5223342059 Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY----MQV--LREQVLSIDA 78 (271) Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r----~ql--~~~~i~~Id~ 78 (271) ||||+||.+..- | +++.+|+. ++.+||||||...- ..+ +....++||+ T Consensus 1 mki~~lGg~~~i-----g----------------~sc~lv~~-----~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~id~ 54 (431) T d2dkfa1 1 MRIVPFGAAREV-----T----------------GSAHLLLA-----GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDA 54 (431) T ss_dssp CEEEECSCSSSS-----S----------------CCEEEEEE-----TTEEEEEEECCCCGGGTTTTTSCCSSCGGGCCE T ss_pred CEEEEECCCCCC-----C----------------CCEEEEEE-----CCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCE T ss_conf 989998789977-----5----------------35999999-----990899989999885343143335999645999 Q ss_pred EEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEECCCC Q ss_conf 99974352422011102433317821110131120232100222210136677531001-23211234433342011587 Q gi|254780214|r 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-VNPIVIENNDVPICMKSAGG 157 (271) Q Consensus 79 I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (271) |||||+|.||++||+.| +..+...+||+++.+.+.+...+....+......+.+. ...................+ T Consensus 55 I~iTH~H~DHigglp~l----~~~~~~~~i~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 130 (431) T d2dkfa1 55 VLLTHAHLDHVGRLPKL----FREGYRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLG 130 (431) T ss_dssp EECCSCCSTTTTTHHHH----HHTTCCSCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHTTEEECCSSCCEESS T ss_pred EEECCCCHHHHCCHHHH----HHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEC T ss_conf 99899986877941889----86178971873889999999986533210122348888999998624542579759989 Q ss_pred CEEEEEEEEECCCEECCCCCCC----CEEEECCCCCCHHHHH---HHHCCHHEEEEECCCC Q ss_conf 4899999950776211233468----6253032330016788---8622211025302335 Q gi|254780214|r 158 VIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESL---EKLQNLDFLIIDALKN 211 (271) Q Consensus 158 ~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt~~~~e~~~---~~l~~~D~lI~d~l~~ 211 (271) ++++++++..|. ..+.+|++. +++|++|++.-+...+ ...+.+|+|+.|++.- T Consensus 131 ~~~v~~~~~gH~-~g~~~~~i~~~~~~i~ytgD~~~~~~~~l~~~~~~~~~d~li~e~t~~ 190 (431) T d2dkfa1 131 ALSLAFGQAGHL-PGSAFVVAQGEGRTLVYSGDLGNREKDVLPDPSLPPLADLVLAEGTYG 190 (431) T ss_dssp SCEEEEEECCSS-TTCEEEEEEETTEEEEECCSCCCTTSSSSCCCCBCCCCSEEEEECTTS T ss_pred CEEEEEEECCCC-CCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC T ss_conf 999999855888-731799999788046525776767776478804532101000124567 No 7 >d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Probab=99.76 E-value=1.1e-20 Score=145.44 Aligned_cols=147 Identities=15% Similarity=0.110 Sum_probs=98.1 Q ss_pred EEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCC Q ss_conf 89998798415667522334205999974352422011102433317821110131120232100222210136677531 Q gi|254780214|r 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 (271) Q Consensus 55 ~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~ 134 (271) +.|||+|.+.+.+..+.+..+++||||||+|.||++|++.|+ ..+++|+++.+...+............. T Consensus 9 ~~~~dp~~~~~~~~~~~~~~~~~AI~iTH~H~DH~~gl~~l~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~--- 78 (183) T d2az4a1 9 KDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLD-------PAVPLYTLKETKMILNSLNRKGDFLIPS--- 78 (183) T ss_dssp SSCBCGGGCCCCCSSCCCCCSEEEEECSCSCHHHHTTGGGBC-------TTSCEEEEHHHHHHHHHHTTTSCSSCCC--- T ss_pred CCEECCCCCCHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHH-------HCCEEECCHHHHHHHHHHHHHHCCCCCC--- T ss_conf 732889998034457545884059997688857608658873-------1645761798999999876530123211--- Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC----CCEEEECCCC------CCHHHHHHHHCCHHEE Q ss_conf 00123211234433342011587489999995077621123346----8625303233------0016788862221102 Q gi|254780214|r 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN------AFPAESLEKLQNLDFL 204 (271) Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~------~~~e~~~~~l~~~D~l 204 (271) ...................+..+++++++++++|....++||+| ++++|+||++ ...+...+.++++|+| T Consensus 79 ~~~~~~~~~~~~~i~~~~~~~ig~~~v~~~~~~h~~pgs~~~~i~~~~~~i~ysGD~~~~g~~~~~~~~~~~~~~~~DlL 158 (183) T d2az4a1 79 PFEEKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEKAKHTELL 158 (183) T ss_dssp TTSCTTCCCCCEEECTTCEEEETTEEEEEEECCCSSTTCEEEEEEETTEEEEECCSCCSSSTTHHHHHHHHHHHTTCSEE T ss_pred CCCCCCCCCCEEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEE T ss_conf 01134676643894699966888987775026643444411565115851788386504687775216678427899899 Q ss_pred EEECCCC Q ss_conf 5302335 Q gi|254780214|r 205 IIDALKN 211 (271) Q Consensus 205 I~d~l~~ 211 (271) |+||+.. T Consensus 159 I~E~T~~ 165 (183) T d2az4a1 159 MMEGVSI 165 (183) T ss_dssp EEECCGG T ss_pred EECCCCC T ss_conf 9898878 No 8 >d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Probab=99.69 E-value=3e-17 Score=124.03 Aligned_cols=156 Identities=13% Similarity=0.058 Sum_probs=87.5 Q ss_pred CCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCC--CHHH-----HHHHCCCC Q ss_conf 8725999985417896513378878777787677444306999933677897189998798--4156-----67522334 Q gi|254780214|r 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--DFYM-----QVLREQVL 74 (271) Q Consensus 2 ~~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~--d~r~-----ql~~~~i~ 74 (271) +|.|.++.||-. -.+|. ++.+++. ++.+||||||- +... ++-....+ T Consensus 1 ~~~~~~~plGG~-----~eIG~----------------n~~lv~~-----~~~~il~D~G~~~~~~~~~~~p~~~~~~~~ 54 (451) T d2i7ta1 1 SDQLLIRPLGAG-----QEVGR----------------SCIILEF-----KGRKIMLDCGIHPGLEGMDALPYIDLIDPA 54 (451) T ss_dssp CEEEEEEEEESS-----SSSSS----------------CEEEEEE-----TTEEEEECCCCCTTSCGGGGSCCGGGSCGG T ss_pred CCCEEEEECCCC-----CCCCC----------------CEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCHH T ss_conf 981899973478-----86411----------------3999999-----993999958999886632237775678975 Q ss_pred CCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCC Q ss_conf 2059999743524220111024333178211101311202321002222101366775310012-----32112344333 Q gi|254780214|r 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV-----NPIVIENNDVP 149 (271) Q Consensus 75 ~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~-----~~~~~~~~~~~ 149 (271) +||+|||||+|.||++||+.+.. ......|||+++.|.+.++..+................ ........... T Consensus 55 ~id~i~lTH~H~DH~ggLp~l~~---~~~~~~pIy~s~~T~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (451) T d2i7ta1 55 EIDLLLISHFHLDHCGALPWFLQ---KTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETIN 131 (451) T ss_dssp GCCEEECCCSSHHHHTTHHHHHH---HSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEEC T ss_pred HCCEEEECCCCHHHHCCHHHHHH---HCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEC T ss_conf 69999989881787695688897---548998888236676666655455543100123345675899987664032004 Q ss_pred CCEECCCCCEEEEEEEEECCCEECCCCCCC----CEEEECCC Q ss_conf 420115874899999950776211233468----62530323 Q gi|254780214|r 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDV 187 (271) Q Consensus 150 ~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~----~~~Y~~Dt 187 (271) .........++++++++.|.. .+.+|+|+ +++|++|. T Consensus 132 ~~~~~~~~~~~v~~~~~~H~~-Gs~~~~i~~~~~~i~~tgD~ 172 (451) T d2i7ta1 132 FHEVKEVAGIKFWCYHAGHVL-GAAMFMIEIAGVKLLYTGDF 172 (451) T ss_dssp TTCCEEETTEEEEEEECCSST-TCEEEEEEETTEEEEECCSC T ss_pred CCCEEEECCEEEEEECCCCCC-CCEEEEEECCCCEEEECCCC T ss_conf 773275088799982268888-75057764177247844777 No 9 >d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=99.63 E-value=2.5e-16 Score=118.30 Aligned_cols=144 Identities=13% Similarity=0.036 Sum_probs=79.2 Q ss_pred CEEEEEECCCCCCCEEEEEECCC--C--HHHHH---HHCCCCCCCEEEEECCCHHHHHHCCHHHH-HHHCCCCEEEEEEC Q ss_conf 06999933677897189998798--4--15667---52233420599997435242201110243-33178211101311 Q gi|254780214|r 40 SSLKISRVSERGSNTTVIVDTGP--D--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAA 111 (271) Q Consensus 40 ~s~~i~~~~~~~~~~~iLiD~G~--d--~r~ql---~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~-~~~~~~~~i~vy~~ 111 (271) ++.+|+. ++.+||||||- + .+.+. +...+.+||+|||||+|.||+++||.|.. +....+...|||++ T Consensus 16 sc~ll~~-----~~~~iLlDcG~~~~~~~~~~~~~~~~~~~~~IdaillTH~H~DHiGalP~L~~~~~~~~~~~~pIy~T 90 (514) T d2i7xa1 16 VGSVVRF-----DNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYAT 90 (514) T ss_dssp CCEEEEE-----TTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEE T ss_pred EEEEEEE-----CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHCCCCCCCCCCEEEC T ss_conf 2899998-----99699998999867656556566553074648799989998678785179998515246888679968 Q ss_pred CEEEEEECCCC-CCCC-CCCCCCCCCCCCCCC-------CCCCCCCCCCEEC--CCCCEEEEEEEEECCCEECCCCCC-- Q ss_conf 20232100222-2101-366775310012321-------1234433342011--587489999995077621123346-- Q gi|254780214|r 112 PDCMKHLFESF-RYCF-KALDDRTYPPIVNPI-------VIENNDVPICMKS--AGGVIEAIPILQQHGRISSLGFRF-- 178 (271) Q Consensus 112 ~~~~~~l~~~~-~y~f-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~i~i~~~~~~Hg~~~~~Gyri-- 178 (271) +.|.+..+-.. ++.- .........+..... .+...+....... ....++++++...|- ..+.++.| T Consensus 91 ~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~y~e~~~i~~~~~~~~~~~~~aGHi-lGsa~~~I~~ 169 (514) T d2i7xa1 91 LPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVC-PGGSIWCIST 169 (514) T ss_dssp HHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSS-TTCEEEEEEC T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCC-CCCEEEEEEE T ss_conf 899999999999999974420555667899999999997440378997598258765379997127777-7766999997 Q ss_pred --CCEEEECCCCC Q ss_conf --86253032330 Q gi|254780214|r 179 --GNVAYCTDVNA 189 (271) Q Consensus 179 --~~~~Y~~Dt~~ 189 (271) ++++|++|.+. T Consensus 170 ~~~~IvytGD~~~ 182 (514) T d2i7xa1 170 YSEKLVYAKRWNH 182 (514) T ss_dssp SSCEEEECSSCCS T ss_pred CCEEEEEEECCCC T ss_conf 9969999702477 No 10 >d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} Probab=99.52 E-value=2.7e-13 Score=99.43 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=98.7 Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEEC Q ss_conf 25999985417896513378878777787677444306999933677897189998798415667522334205999974 Q gi|254780214|r 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTH 83 (271) Q Consensus 4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH 83 (271) -||||.||. +|.+|+. ++.+||+|.-.. .......--+.|+|++|| T Consensus 1 ~MkItwlGh---------------------------s~~lIe~-----~g~~iliDP~~~--~~~~~~~~~~~D~VliSH 46 (209) T d1vjna_ 1 HMKITWFGH---------------------------ACFALEM-----EGKTIVTDPFDE--SVGYPIPNVTADVVTESH 46 (209) T ss_dssp CEEEEEEET---------------------------TEEEEEE-----TTEEEEESCCC-------CCCCCBCSEEECSS T ss_pred CEEEEEECC---------------------------CEEEEEE-----CCEEEEECCCCC--CCCCCCCCCCCCEEEECC T ss_conf 929999526---------------------------6999998-----999999899987--668987667688999778 Q ss_pred CCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEE Q ss_conf 35242201110243331782111013112023210022221013667753100123211234433342011587489999 Q gi|254780214|r 84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 (271) Q Consensus 84 ~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~ 163 (271) .|.||..-- .. .+. ..+ +.. ... ...++++++. T Consensus 47 ~H~DH~~~~------~~-~~~-------~~~---~~~----------------------------~g~--~~~~~~~i~~ 79 (209) T d1vjna_ 47 QHFDHNAHH------LV-KGN-------FRV---IDR----------------------------PGA--YTVNGVKIKG 79 (209) T ss_dssp CC---CGGG------GC-BSS-------CEE---ECS----------------------------SEE--EEETTEEEEE T ss_pred CCCCCCCHH------HC-CCC-------CCC---CCC----------------------------CCC--EECCCCEEEE T ss_conf 887767632------30-353-------101---257----------------------------675--7638852450 Q ss_pred EEEECCCE------ECCCCCCC----CEEEECCCCCCHH-HHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCC Q ss_conf 99507762------11233468----6253032330016-7888622211025302335768875799999999997299 Q gi|254780214|r 164 ILQQHGRI------SSLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINP 232 (271) Q Consensus 164 ~~~~Hg~~------~~~Gyri~----~~~Y~~Dt~~~~e-~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~ 232 (271) ++..|.+. .++||.++ ++.+++|+.+.++ +.+..+.++|++++-. -.+.|++.+||+++++.++| T Consensus 80 v~a~h~~~~~~~~~~~~~~~i~~~g~~i~~~GDt~~~~~~~~~~~~~~~Dva~lpi----gg~~~m~~~ea~~~~~~l~p 155 (209) T d1vjna_ 80 VETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPV----GGTYTIGPKEAKEVADLLNA 155 (209) T ss_dssp EEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEEC----CSSSSCCHHHHHHHHHHTTC T ss_pred EEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEEC----CCCCCCCHHHHHHHHHHHCC T ss_conf 56550478886577616999984996899958865787889986407940999834----98521699999999998399 Q ss_pred CEEEEECCCC Q ss_conf 7799976888 Q gi|254780214|r 233 KNAILTHMHV 242 (271) Q Consensus 233 k~~~LtHls~ 242 (271) |+++-+|... T Consensus 156 k~viP~H~~t 165 (209) T d1vjna_ 156 KVIIPMHYKT 165 (209) T ss_dssp SEEEEESCCC T ss_pred CEEEEECCCC T ss_conf 9999951699 No 11 >d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Probab=99.34 E-value=8.2e-13 Score=96.44 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=56.6 Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC-------------------- Q ss_conf 259999854178965133788787777876774443069999336778971899987984-------------------- Q gi|254780214|r 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-------------------- 63 (271) Q Consensus 4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d-------------------- 63 (271) .+||+|+-.|... | .+++|+. +++++|||||+. T Consensus 1 ~~~i~f~dVGqGd------~----------------~~ili~~-----~g~~iLID~G~~~~~~~~~~~~~~~~~~~~~~ 53 (305) T d1wraa1 1 GNKIHFINVQEGG------S----------------DAIILES-----NGHFAMVDTGEDYDFPDGSDSRYPWREGIETS 53 (305) T ss_dssp CCEEEEECBSSSB------C----------------CEEEEEE-----TTEEEEEEECCCSCCCCSSSTTSCCCTTCCCC T ss_pred CCEEEEEECCCCC------E----------------EEEEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 9989999548887------5----------------9999988-----99999998989976552111122322223444 Q ss_pred --------HHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEE Q ss_conf --------15667522334205999974352422011102433317821110131120232 Q gi|254780214|r 64 --------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 (271) Q Consensus 64 --------~r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~ 116 (271) +...|.+.++++||++++||.|.||+.|++.|. .....-.||.++.... T Consensus 54 ~~~~~~~~i~~~L~~~gi~~ID~lilTH~h~DHigGl~~ll----~~~~i~~v~~~~~~~~ 110 (305) T d1wraa1 54 YKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELL----STYPVDRVYLKKYSDS 110 (305) T ss_dssp GGGCCHHHHHHHHHHTTCCCEEEEECCCSCHHHHTTHHHHH----TTSCEEEEECCCCCGG T ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHCCHHHHH----HHCCCCEEEECCCCCC T ss_conf 33312778999999749984318997889801116899999----8587778996897555 No 12 >d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Probab=99.26 E-value=3.4e-12 Score=92.55 Aligned_cols=73 Identities=25% Similarity=0.289 Sum_probs=53.6 Q ss_pred EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCH-----HHHHHHCCC--CCCC Q ss_conf 599998541789651337887877778767744430699993367789718999879841-----566752233--4205 Q gi|254780214|r 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF-----YMQVLREQV--LSID 77 (271) Q Consensus 5 m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~-----r~ql~~~~i--~~Id 77 (271) ||+++|++|++..+|... +....++.+|.. +++.+|||||+.. +.++.+.++ ++|+ T Consensus 1 m~~~~l~~g~~~~ip~~~------------~~~~~~~~li~~-----~~~~iliD~G~~~~~~~~~~~l~~~g~~~~~I~ 63 (207) T d1ztca1 1 MELKILVTGGNVFVPGRL------------NAHFSTVVYLEH-----KDRRIIIDPGNLSSMDELEEKFSELGISPDDIT 63 (207) T ss_dssp EEEEEEECCBEEEETTTE------------ECCBCCEEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCC T ss_pred CEEEEEEECCCEECCCCC------------CCCEEEEEEEEE-----CCEEEEEECCCCCCHHHHHHHHHHCCCCHHHEE T ss_conf 988999839976778876------------897158999998-----996999909987228999999998599837816 Q ss_pred EEEEECCCHHHHHHCCH Q ss_conf 99997435242201110 Q gi|254780214|r 78 AVLYTHPHADHIHGIDG 94 (271) Q Consensus 78 ~I~iTH~H~DHi~Gl~~ 94 (271) +|++||.|+||++|+.. T Consensus 64 ~IiiTH~H~DH~gg~~~ 80 (207) T d1ztca1 64 DVLFTHVHLDHIFNSVL 80 (207) T ss_dssp EEECSCCCHHHHGGGGG T ss_pred EEEECCCCCCCCCCCHH T ss_conf 99937877554455100 No 13 >d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Probab=99.08 E-value=8.2e-11 Score=84.00 Aligned_cols=72 Identities=19% Similarity=0.296 Sum_probs=50.0 Q ss_pred CEEEEEECCCCCCCEEEEEECCCC-----HHHHHHHCC--CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECC Q ss_conf 069999336778971899987984-----156675223--3420599997435242201110243331782111013112 Q gi|254780214|r 40 SSLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 (271) Q Consensus 40 ~s~~i~~~~~~~~~~~iLiD~G~d-----~r~ql~~~~--i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~ 112 (271) +|.+|.. ++..+|||||.. +..++.+.+ +++|++|++||.|.||++|+..|+. ....+||+++ T Consensus 38 ~~yli~~-----~~g~vLIDtG~~~~~~~~~~~l~~~G~~~~~I~~Ii~TH~H~DH~gg~~~l~~-----~~~~~v~~~~ 107 (266) T d2aioa1 38 TALLVQT-----PDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKR-----RTGAKVAANA 107 (266) T ss_dssp CCEEEEE-----TTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHH-----HSSCEEEECH T ss_pred EEEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCHHHHHH-----HCCEEEEEEE T ss_conf 8999994-----99779991979434599999998739983782899955778601045588762-----1331799973 Q ss_pred EEEEEECCC Q ss_conf 023210022 Q gi|254780214|r 113 DCMKHLFES 121 (271) Q Consensus 113 ~~~~~l~~~ 121 (271) ...+.+.+. T Consensus 108 ~~~~~~~~~ 116 (266) T d2aioa1 108 ESAVLLARG 116 (266) T ss_dssp HHHHHHHTT T ss_pred CHHHHHHCC T ss_conf 025666301 No 14 >d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Probab=98.98 E-value=8.9e-10 Score=77.56 Aligned_cols=73 Identities=12% Similarity=0.230 Sum_probs=48.5 Q ss_pred CEEEEEECCCCCCCEEEEEECCCC-----HHHHHHHC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECC Q ss_conf 069999336778971899987984-----15667522--33420599997435242201110243331782111013112 Q gi|254780214|r 40 SSLKISRVSERGSNTTVIVDTGPD-----FYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 (271) Q Consensus 40 ~s~~i~~~~~~~~~~~iLiD~G~d-----~r~ql~~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~ 112 (271) +|.+|.. +++.+|||||.. ++.++.+. +.++|++|++||.|.||++|...+. .+...++|+++ T Consensus 25 ~~~li~~-----~~~~vLID~g~~~~~~~i~~~l~~~~~~~~~i~~il~TH~H~DH~gg~~~~~-----~~~~~~i~~~~ 94 (262) T d1k07a_ 25 ASYLIVT-----PRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIK-----QQTKAKYMVMD 94 (262) T ss_dssp CCEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHH-----HHHCCEEEEEH T ss_pred EEEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH-----HCCCCCEEECH T ss_conf 8999998-----9989999499954499999999975999501169997887511233256676-----53699667355 Q ss_pred EEEEEECCCC Q ss_conf 0232100222 Q gi|254780214|r 113 DCMKHLFESF 122 (271) Q Consensus 113 ~~~~~l~~~~ 122 (271) .....+.+.. T Consensus 95 ~~~~~~~~~~ 104 (262) T d1k07a_ 95 EDVSVILSGG 104 (262) T ss_dssp HHHHHHHTTT T ss_pred HHHHHHHHHH T ss_conf 6777776321 No 15 >d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Probab=98.97 E-value=3.7e-10 Score=79.93 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=48.9 Q ss_pred CEEEEEECCCCCCCEEEEEECCCCHH-----HHHHHCC--CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECC Q ss_conf 06999933677897189998798415-----6675223--3420599997435242201110243331782111013112 Q gi|254780214|r 40 SSLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 (271) Q Consensus 40 ~s~~i~~~~~~~~~~~iLiD~G~d~r-----~ql~~~~--i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~ 112 (271) +|.+|.. +++.+|||||..-. .++.+.+ .++|++|++||.|.||++|+..|+. +...+||+++ T Consensus 28 n~~lI~~-----~~~~vLIDtG~~~~~~~~~~~i~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~-----~~~a~i~~~~ 97 (264) T d2gmna1 28 AVYVIKT-----SQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKK-----ETGAQLVAGE 97 (264) T ss_dssp CCEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHH-----HHCCEEEEEG T ss_pred EEEEEEE-----CCEEEEECCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHH-----HCCCEEEEEC T ss_conf 9999998-----99999983999610999999999739980341799979878532010467788-----6198588500 Q ss_pred EEEEEECCCC Q ss_conf 0232100222 Q gi|254780214|r 113 DCMKHLFESF 122 (271) Q Consensus 113 ~~~~~l~~~~ 122 (271) .....++..+ T Consensus 98 ~~~~~~~~~~ 107 (264) T d2gmna1 98 RDKPLLEGGY 107 (264) T ss_dssp GGHHHHHHTC T ss_pred CCCCCCCCCC T ss_conf 0121012331 No 16 >d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Probab=98.97 E-value=1.7e-10 Score=82.05 Aligned_cols=50 Identities=24% Similarity=0.352 Sum_probs=37.6 Q ss_pred EEEEEECCCCCCCEEEEEECCCC---------HHHHHHHCCC--CCCCEEEEECCCHHHHHHCCHH Q ss_conf 69999336778971899987984---------1566752233--4205999974352422011102 Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTGPD---------FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL 95 (271) Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G~d---------~r~ql~~~~i--~~Id~I~iTH~H~DHi~Gl~~L 95 (271) +.+|+ .+++.||||||.+ +..+|.+.++ ++||+|++||.|.||++|+..+ T Consensus 64 ~~LI~-----~~~~~iLiDtG~g~~~~~~~~~l~~~L~~~Gi~p~dI~~VilTH~H~DHiGgl~~~ 124 (294) T d1p9ea_ 64 GYLVN-----TGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVG 124 (294) T ss_dssp EEEEE-----CSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEET T ss_pred EEEEE-----ECCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCCCHHHH T ss_conf 99999-----89907999899996667308899999998499979980997898981210744354 No 17 >d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Probab=98.81 E-value=6.4e-10 Score=78.45 Aligned_cols=65 Identities=14% Similarity=0.081 Sum_probs=43.8 Q ss_pred CCCEEEEEECCCC--HHHHHH----HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC Q ss_conf 8971899987984--156675----2233420599997435242201110243331782111013112023210022 Q gi|254780214|r 51 GSNTTVIVDTGPD--FYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 (271) Q Consensus 51 ~~~~~iLiD~G~d--~r~ql~----~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~ 121 (271) +++..+|||+|.+ ...+++ +...++|++|++||.|.||++|+..++ . ...++|+++.+.+.+++. T Consensus 30 ~~~g~vlID~g~~~~~~~~l~~~i~~~~~~~i~~ii~TH~H~DH~gg~~~~~----~--~~~~i~a~~~~~~~~~~~ 100 (228) T d1x8ha_ 30 GAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWK----S--IGAKVVSTRQTRDLMKSD 100 (228) T ss_dssp CSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHH----H--TTCEEEEEHHHHHHHHHH T ss_pred ECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHC----C--CCCEEECCHHHHHHHHHH T ss_conf 8999999929899899999999999726998559998889966146501000----0--472353268899999740 No 18 >d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=98.75 E-value=1.1e-09 Score=76.98 Aligned_cols=72 Identities=11% Similarity=0.121 Sum_probs=46.5 Q ss_pred EEEEEECCCCCCCEEEEEECCCCH-HHHHH----H-CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE Q ss_conf 699993367789718999879841-56675----2-23342059999743524220111024333178211101311202 Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTGPDF-YMQVL----R-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 (271) Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G~d~-r~ql~----~-~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~ 114 (271) |.+|. ++++.+|||+|+.- +.+++ + .+.++|++|++||.|.||++|+..+.. .......+|+++.. T Consensus 42 ~yLI~-----~~~~~vLIDtG~~~~~~~~~~~l~~~~~~~~I~~IilTH~H~DH~Gg~~~~~~---~~~~~~~i~~~~~~ 113 (250) T d1vmea2 42 AYLVK-----LNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLK---TIGHDVEIIASNFG 113 (250) T ss_dssp EEEEE-----CSSCEEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHH---HHCSCCEEEECHHH T ss_pred EEEEE-----ECCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCHHHHHHH---HCCCCEEEEECHHH T ss_conf 99999-----89978999398816899999999864785466699978888334442999997---55762599726566 Q ss_pred EEEECC Q ss_conf 321002 Q gi|254780214|r 115 MKHLFE 120 (271) Q Consensus 115 ~~~l~~ 120 (271) ...+.. T Consensus 114 ~~~~~~ 119 (250) T d1vmea2 114 KRLLEG 119 (250) T ss_dssp HHHHHH T ss_pred HHCCCC T ss_conf 410222 No 19 >d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Probab=98.75 E-value=1.3e-08 Score=70.37 Aligned_cols=64 Identities=19% Similarity=0.102 Sum_probs=42.2 Q ss_pred CCEEEEEECCCC-HHH----HHHHC--CCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEEC Q ss_conf 971899987984-156----67522--334205999974352422011102433317821110131120232100 Q gi|254780214|r 52 SNTTVIVDTGPD-FYM----QVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 (271) Q Consensus 52 ~~~~iLiD~G~d-~r~----ql~~~--~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~ 119 (271) ++..+|||||.. -.. ++.+. +.++|++|++||.|.||++|+..|.. .....+||+++...+.+. T Consensus 31 ~~~~vLID~G~~~~~~~~~~~l~~~~~~~~~I~~vi~TH~H~DH~Gg~~~l~~----~~p~a~v~~~~~~~~~~~ 101 (298) T d2q0ia1 31 EASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCP----RLPNVQVLASERTCQAWK 101 (298) T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSHHHHTTHHHHGG----GCTTCEEEEEHHHHHHTT T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCCCCCHHCEEEEECCCCCCCCCCHHHHHH----HCCCCEEEECHHHHHHHH T ss_conf 98789985999863999999999709981664499968988444472366786----478877996078888873 No 20 >d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Probab=98.72 E-value=3.9e-09 Score=73.56 Aligned_cols=65 Identities=15% Similarity=0.223 Sum_probs=41.6 Q ss_pred CEEEEEECCCCH-HHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC Q ss_conf 718999879841-566752-----233420599997435242201110243331782111013112023210022 Q gi|254780214|r 53 NTTVIVDTGPDF-YMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 (271) Q Consensus 53 ~~~iLiD~G~d~-r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~ 121 (271) +..+|||+|..- ..+++. .+.++|++|++||.|.||++|+..+. .......+++++...+.+.+. T Consensus 44 e~~~LIDtg~~~~~~~~~~~~~~~~~~~~i~~Ii~TH~H~DH~gg~~~~~----~~~~~~~~~~~~~~~~~l~~~ 114 (249) T d1ycga2 44 DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIM----ELCPDAHVLCTQRAFDSLKAH 114 (249) T ss_dssp SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHH----HHCTTCEEEECHHHHHHHHHH T ss_pred CCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH----HHHCCCEEEEEHHHHHHHHHH T ss_conf 99999989982355999999997569878419991465542366778888----750561686506788887650 No 21 >d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Probab=98.64 E-value=9.9e-09 Score=71.05 Aligned_cols=63 Identities=19% Similarity=0.175 Sum_probs=39.8 Q ss_pred CEEEEEECCCCH-HHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEEC Q ss_conf 718999879841-566752-----2334205999974352422011102433317821110131120232100 Q gi|254780214|r 53 NTTVIVDTGPDF-YMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 (271) Q Consensus 53 ~~~iLiD~G~d~-r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~ 119 (271) ++.+|||+|..- +.++++ .+.++|++|++||.|.||++|+..+.. ......+|+++.....+. T Consensus 42 ~~~vLIDtg~~~~~~~~~~~~~~~~~~~~I~~Ii~TH~H~DH~gg~~~~~~----~~~~~~~~~~~~~~~~~~ 110 (249) T d1e5da2 42 EKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIE----ACQPEKIFTSSLGQKAME 110 (249) T ss_dssp SSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHH----HHCCSEEEEEHHHHHHHH T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCHHHHHHH----HHCCCCEEEHHHHHHHHH T ss_conf 999999198867899999999975698776399968857676431899999----723001430245677665 No 22 >d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Probab=98.59 E-value=5e-08 Score=66.66 Aligned_cols=46 Identities=28% Similarity=0.341 Sum_probs=31.6 Q ss_pred CCEEEEEECCCCHH-HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHH Q ss_conf 97189998798415-66752233420599997435242201110243 Q gi|254780214|r 52 SNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 (271) Q Consensus 52 ~~~~iLiD~G~d~r-~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~ 97 (271) .+..++||+|..-. .+.++..--+|.+||+||.|+||+.|...|+. T Consensus 22 t~~a~vIDP~~~~~i~~~l~~~~~~l~~Il~TH~H~DHi~g~~~l~~ 68 (260) T d1qh5a_ 22 TKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVK 68 (260) T ss_dssp TTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHH T ss_pred CCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHCCCHHHHC T ss_conf 99999990997899999999779947899758877455340212203 No 23 >d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Probab=98.58 E-value=3e-08 Score=68.09 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=61.9 Q ss_pred CEEEEEECCCCCCCEEEEEECCCCHH-HHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEE Q ss_conf 06999933677897189998798415-66752233420599997435242201110243331782111013112023210 Q gi|254780214|r 40 SSLKISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 (271) Q Consensus 40 ~s~~i~~~~~~~~~~~iLiD~G~d~r-~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l 118 (271) .|-+|.. . .+..++||+|..-+ .+.++..-.++.+||+||.|+||+.|...|+.-+ ....+|++....... T Consensus 13 y~YLi~~-~---~~~avvIDPg~~~~il~~i~~~~~~l~~Il~TH~H~DHi~g~~~l~~~~----~~~~~~~~~~~~~~~ 84 (251) T d2qeda1 13 YIWVLTN-D---EGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHF----PQMTVYGPAETQDKG 84 (251) T ss_dssp EEEEEEC-T---TSEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHC----TTCEEEECGGGGGGT T ss_pred EEEEEEE-C---CCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH----HCCEECCCCCCCCCC T ss_conf 8999994-8---9709998488649999999975995469995788622232145677764----022001464322233 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCCCCEEEECCC Q ss_conf 022221013667753100123211234433342011587489999995077621123346862530323 Q gi|254780214|r 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 (271) Q Consensus 119 ~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri~~~~Y~~Dt 187 (271) ....++ .+.....+.+++..+..+-....++.|.+++.+++||| T Consensus 85 --------------------~~~~l~-----dgd~i~~g~~~~~vi~TPGHT~g~v~~~~~~~lftGDt 128 (251) T d2qeda1 85 --------------------ATHLVG-----DGDTIRVLGEKFTLFATPGHTLGHVCYFSRPYLFCGDT 128 (251) T ss_dssp --------------------CSEECC-----TTCEEEETTEEEEEEECCSSSTTCEEEEETTEEEEETT T ss_pred --------------------CCEEEE-----CCCEEEECCCEEEEEECCCCCCCCEEEECCCEEEECCC T ss_conf --------------------211220-----11002435844899977899998678740562650484 No 24 >d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=98.48 E-value=2.5e-07 Score=62.33 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=56.2 Q ss_pred CCEEEEEECCCCH-HHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCC Q ss_conf 9718999879841-566752233420599997435242201110243331782111013112023210022221013667 Q gi|254780214|r 52 SNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 (271) Q Consensus 52 ~~~~iLiD~G~d~-r~ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~ 130 (271) .+..++||+|..- ..+.++..-.++.+|++||.|+||++|...|+. ..+.++|+.+.....+. T Consensus 22 t~~avvIDPg~~~~i~~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~-----~~~~~v~~~~~~~~~~~----------- 85 (254) T d1xm8a_ 22 TGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKD-----RYGAKVIGSAMDKDRIP----------- 85 (254) T ss_dssp TCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHH-----HHCCEEEEEGGGGGGST----------- T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH-----HCCCCEEECCCCCCCCC----------- T ss_conf 99899997989399999999779950588636575312172699875-----15970895142124587----------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC--CCEEEECCC Q ss_conf 753100123211234433342011587489999995077621123346--862530323 Q gi|254780214|r 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--GNVAYCTDV 187 (271) Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri--~~~~Y~~Dt 187 (271) . .. ..++ .+.....++.++..+..+-....++.|-+ .+++++||| T Consensus 86 -----~-~~-~~l~-----dgd~i~lg~~~i~vl~TPGHT~ghi~~~~~~~~~lftGDt 132 (254) T d1xm8a_ 86 -----G-ID-MALK-----DGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDT 132 (254) T ss_dssp -----T-EE-EEEC-----TTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETT T ss_pred -----C-CC-EEEC-----CCCEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEECCE T ss_conf -----8-98-8855-----8874223584899951467888866999736535772778 No 25 >d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Probab=98.46 E-value=5.7e-08 Score=66.33 Aligned_cols=60 Identities=18% Similarity=0.272 Sum_probs=39.2 Q ss_pred CCCEEEEEECCCCHH--HHHHH----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEE Q ss_conf 897189998798415--66752----2334205999974352422011102433317821110131120232 Q gi|254780214|r 51 GSNTTVIVDTGPDFY--MQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 (271) Q Consensus 51 ~~~~~iLiD~G~d~r--~ql~~----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~ 116 (271) +++..+|||+|.+.. .++++ ....+|++||+||.|+||++|+..|+ +..+++|..+.+.. T Consensus 42 ~~~~~iliD~g~~~~~~~~l~~~i~~~~~~~i~~vi~TH~H~DH~gg~~~~~------~~~~~~~~~~~~~~ 107 (230) T d1znba_ 42 NNHQAALLDTPINDAQTETLVNWVADSLHAKVTTFIPNHWHGDCIGGLGYLQ------KKGVQSYANQMTID 107 (230) T ss_dssp ETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHH------HTTCEEEEEHHHHH T ss_pred ECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH------HHHCCCCCCCHHHH T ss_conf 8999999979999799999999998743874119998788624427599996------44233333511233 No 26 >d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Probab=98.44 E-value=7.1e-08 Score=65.75 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=43.8 Q ss_pred EEEEEECCCCCCCEEEEEECCCCH--HHHHH----HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE Q ss_conf 699993367789718999879841--56675----223342059999743524220111024333178211101311202 Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTGPDF--YMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 (271) Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G~d~--r~ql~----~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~ 114 (271) |.+|.. ++..+|||+|.+. -.++. +...++|++|++||.|+||++|+..++ +..+++|.++.+ T Consensus 29 ~~~i~~-----~~~~iliD~g~~~~~~~~l~~~~~~~~~~~i~~vi~TH~H~DH~gg~~~~~------~~~~~~~~~~~~ 97 (219) T d1m2xa_ 29 AVYLVT-----DKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFG------KIGAKTYSTKMT 97 (219) T ss_dssp EEEEEE-----TTEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHH------HTTCEEEEEHHH T ss_pred EEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH------HCCCCEECCHHH T ss_conf 999998-----999999979999799999999987416986069996788833237399998------659970204456 Q ss_pred EEEEC Q ss_conf 32100 Q gi|254780214|r 115 MKHLF 119 (271) Q Consensus 115 ~~~l~ 119 (271) .+.+. T Consensus 98 ~~~~~ 102 (219) T d1m2xa_ 98 DSILA 102 (219) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 76765 No 27 >d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Probab=98.40 E-value=1e-07 Score=64.73 Aligned_cols=68 Identities=24% Similarity=0.348 Sum_probs=42.1 Q ss_pred EEEEEECCCCCCCEEEEEECCCCH--HHHHHH----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE Q ss_conf 699993367789718999879841--566752----23342059999743524220111024333178211101311202 Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTGPDF--YMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 (271) Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G~d~--r~ql~~----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~ 114 (271) |.+|. +++..+|||+|..- ..++++ ..-.+|++|++||.|+||++|+..|. . ...++++.+.. T Consensus 40 ~~li~-----~~~~~vLID~g~~~~~~~~~~~~i~~~~~~~i~~ii~TH~H~DH~gg~~~~~----~--~~~~~~~~~~~ 108 (230) T d1ko3a_ 40 GLIVR-----DGDELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLR----A--AGVATYASPST 108 (230) T ss_dssp EEEEE-----ETTEEEEESCCSSHHHHHHHHHHHHTTTCCCEEEEECSSSSHHHHTTHHHHH----H--TTCEEEECHHH T ss_pred EEEEE-----ECCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHH----H--CCCCEEEECCC T ss_conf 99998-----3998899879999899999999998731972679997799866428899996----4--58863761211 Q ss_pred EEEEC Q ss_conf 32100 Q gi|254780214|r 115 MKHLF 119 (271) Q Consensus 115 ~~~l~ 119 (271) ...+. T Consensus 109 ~~~~~ 113 (230) T d1ko3a_ 109 RRLAE 113 (230) T ss_dssp HHHHH T ss_pred CCHHH T ss_conf 10010 No 28 >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Probab=98.36 E-value=4.4e-07 Score=60.78 Aligned_cols=66 Identities=27% Similarity=0.372 Sum_probs=41.6 Q ss_pred EEEEEECCCCCCCEEEEEECCCCH--HHHHHH---CC-CCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE Q ss_conf 699993367789718999879841--566752---23-342059999743524220111024333178211101311202 Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTGPDF--YMQVLR---EQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 (271) Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G~d~--r~ql~~---~~-i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~ 114 (271) +.+|.. ++..+|||+|.+- ..++++ .. -++|.+|++||.|+||++|+..+. ...+++|..+.+ T Consensus 37 ~~li~~-----~~~~iLIDt~~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~~~------~~~v~~~~~~~~ 105 (221) T d1mqoa_ 37 GLVLNT-----SKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLK------ERGIKAHSTALT 105 (221) T ss_dssp EEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHH------HHTCEEECBHHH T ss_pred EEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH------HCCCCEEECHHH T ss_conf 999998-----999999939899899999999999752998429998889844118889986------378723401445 Q ss_pred EEE Q ss_conf 321 Q gi|254780214|r 115 MKH 117 (271) Q Consensus 115 ~~~ 117 (271) .+. T Consensus 106 ~~~ 108 (221) T d1mqoa_ 106 AEL 108 (221) T ss_dssp HHH T ss_pred HHH T ss_conf 434 No 29 >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Probab=98.29 E-value=4.8e-07 Score=60.56 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=41.9 Q ss_pred CCCEEEEEECCCCHH--HHHH----H-CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEE Q ss_conf 897189998798415--6675----2-233420599997435242201110243331782111013112023210 Q gi|254780214|r 51 GSNTTVIVDTGPDFY--MQVL----R-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 (271) Q Consensus 51 ~~~~~iLiD~G~d~r--~ql~----~-~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l 118 (271) +++..|+||+|.... .+++ + .+.+.|.+|++||.|.||++|..-+..-........+||+++...+.+ T Consensus 111 gddG~iVIDtg~s~e~a~~~l~~~~~~l~~kPV~aVI~TH~H~DH~GGa~~~~e~~~~~~~~~~IiA~~~~~~~~ 185 (505) T d2cfua2 111 GDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAA 185 (505) T ss_dssp CSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHH T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHH T ss_conf 698799997999989999999999874479983899968997001315899963034326873499516789998 No 30 >d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Probab=98.23 E-value=3.1e-07 Score=61.72 Aligned_cols=64 Identities=23% Similarity=0.275 Sum_probs=43.2 Q ss_pred CCEEEEEECCCCHH--HHHH---HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCC Q ss_conf 97189998798415--6675---2233420599997435242201110243331782111013112023210022 Q gi|254780214|r 52 SNTTVIVDTGPDFY--MQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 (271) Q Consensus 52 ~~~~iLiD~G~d~r--~ql~---~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~ 121 (271) ++..+|||+|.+.. .+++ +..-.+|++|++||.|+||++|...+. ....++|+++.+.+.+.+. T Consensus 39 ~~~~~liDt~~~~~~~~~~~~~i~~~~~~i~~vi~TH~H~DH~gg~~~~~------~~~~~v~~~~~~~~~~~~~ 107 (220) T d1jjta_ 39 NAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLN------SRSIPTYASELTNELLKKD 107 (220) T ss_dssp TTEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHH------HTTCCEEEEHHHHHHHHHT T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH------HCCCCEEECHHHHHHHHHC T ss_conf 99999994989989999999999964997589997776300012399997------5699846442333333321 No 31 >d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Probab=97.73 E-value=2.1e-05 Score=50.32 Aligned_cols=57 Identities=9% Similarity=0.128 Sum_probs=37.2 Q ss_pred CCEEEEEECCCCHHH--HHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEE Q ss_conf 971899987984156--67522334205999974352422011102433317821110131120232 Q gi|254780214|r 52 SNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 (271) Q Consensus 52 ~~~~iLiD~G~d~r~--ql~~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~ 116 (271) +++++|||+|+.... +.++ ..+.|++|++|| .||++|...++ .+...++|+++.... T Consensus 31 ~~g~vlIDp~~~~~~~~~~l~-~~g~i~~vi~TH--~DH~g~~~~~~-----~~~~a~i~~~~~~~~ 89 (200) T d2p97a1 31 PEGNILIDPVALSNHDWKHLE-SLGGVVWIVLTN--SDHVRSAKEIA-----DQTYTKIAGPVAEKE 89 (200) T ss_dssp TTCCEEESCCCCCHHHHHHHH-HTTCCSEEECSS--GGGCTTHHHHH-----HHSCCEEEEEGGGTT T ss_pred CCEEEEEECCCCHHHHHHHHH-HCCCCCEEEECC--CCCCCHHHHHH-----HHCCCEEEEECCCCC T ss_conf 991399979868599999998-629964997127--10144089999-----753862884101123 No 32 >d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=45.45 E-value=4.5 Score=17.21 Aligned_cols=11 Identities=27% Similarity=0.558 Sum_probs=8.9 Q ss_pred EEEEEEEEECC Q ss_conf 25999985417 Q gi|254780214|r 4 YYHFTILGCGA 14 (271) Q Consensus 4 ~m~l~~LGtg~ 14 (271) .|+|.+||+|+ T Consensus 1 Mm~IkVlg~gC 11 (77) T d1iloa_ 1 MMKIQIYGTGC 11 (77) T ss_dssp CEEEEEECSSS T ss_pred CCEEEEECCCC T ss_conf 95799968999 No 33 >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} Probab=30.13 E-value=10 Score=14.98 Aligned_cols=13 Identities=8% Similarity=0.153 Sum_probs=11.1 Q ss_pred CCEEEEEEEEECC Q ss_conf 8725999985417 Q gi|254780214|r 2 KDYYHFTILGCGA 14 (271) Q Consensus 2 ~~~m~l~~LGtg~ 14 (271) |+-|||.|+||+. T Consensus 1 ~~~mKI~f~G~~~ 13 (206) T d1fmta2 1 SESLRIIFAGTPD 13 (206) T ss_dssp CCCCEEEEEECSH T ss_pred CCCCEEEEECCCH T ss_conf 9974899988988 No 34 >d1vjta1 c.2.1.5 (A:-1-191) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]} Probab=28.78 E-value=8.9 Score=15.39 Aligned_cols=15 Identities=20% Similarity=0.523 Sum_probs=11.3 Q ss_pred EEEEEEEEECCCCCEE Q ss_conf 2599998541789651 Q gi|254780214|r 4 YYHFTILGCGASLGVP 19 (271) Q Consensus 4 ~m~l~~LGtg~s~g~P 19 (271) .|||+++|.|+ .|.+ T Consensus 2 ~mKI~viGaGs-~gta 16 (193) T d1vjta1 2 HMKISIIGAGS-VRFA 16 (193) T ss_dssp CEEEEEETTTS-HHHH T ss_pred CCEEEEECCCH-HHHH T ss_conf 98999989888-9999 No 35 >d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]} Probab=28.69 E-value=13 Score=14.43 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=20.1 Q ss_pred CEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCH Q ss_conf 7189998798415667522334205999974352 Q gi|254780214|r 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHA 86 (271) Q Consensus 53 ~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH~H~ 86 (271) +--|-+|||.+-...+...+-..+| |++||.|. T Consensus 82 ~LiItvD~G~~~~e~i~~~~~~gi~-vIv~DHH~ 114 (385) T d1ir6a_ 82 DLFLTVDCGITNHAELRELLENGVE-VIVTDHHT 114 (385) T ss_dssp SEEEESSCCTTCGGGHHHHTTSCCE-EEEECCSC T ss_pred CEEEEECCCCCCHHHHHHHHHCCCC-EECCCCCC T ss_conf 7699823652203667667632872-32146546 No 36 >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Probab=23.64 E-value=14 Score=14.17 Aligned_cols=14 Identities=29% Similarity=0.470 Sum_probs=11.1 Q ss_pred CCCEEEEEEEEECC Q ss_conf 98725999985417 Q gi|254780214|r 1 MKDYYHFTILGCGA 14 (271) Q Consensus 1 m~~~m~l~~LGtg~ 14 (271) |...||++++|+|. T Consensus 2 m~~~~KI~IIGaG~ 15 (146) T d1ez4a1 2 MPNHQKVVLVGDGA 15 (146) T ss_dssp BTTBCEEEEECCSH T ss_pred CCCCCEEEEECCCH T ss_conf 99997799989888 No 37 >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Probab=23.61 E-value=11 Score=14.89 Aligned_cols=10 Identities=50% Similarity=0.777 Sum_probs=9.1 Q ss_pred EEEEEEEECC Q ss_conf 5999985417 Q gi|254780214|r 5 YHFTILGCGA 14 (271) Q Consensus 5 m~l~~LGtg~ 14 (271) |||+++|+|+ T Consensus 1 MkI~ViGaG~ 10 (180) T d1txga2 1 MIVSILGAGA 10 (180) T ss_dssp CEEEEESCCH T ss_pred CEEEEECCCH T ss_conf 9899999799 No 38 >d1b9ra_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Pseudomonas sp., terpredoxin [TaxId: 306]} Probab=21.51 E-value=13 Score=14.30 Aligned_cols=11 Identities=36% Similarity=0.930 Sum_probs=5.9 Q ss_pred EECCEEEEECC Q ss_conf 20448996269 Q gi|254780214|r 261 FDGMQFSSPIP 271 (271) Q Consensus 261 ~DGm~i~l~~~ 271 (271) .|||+|++|+| T Consensus 94 ldgl~V~vP~~ 104 (105) T d1b9ra_ 94 MDGLIVRVPLP 104 (105) T ss_dssp STTEEEECCSC T ss_pred CCCEEEEECCC T ss_conf 79819992699 No 39 >d2atza1 d.264.1.3 (A:3-178) Hypothetical protein HP0184 {Helicobacter pylori [TaxId: 210]} Probab=21.33 E-value=18 Score=13.49 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=15.0 Q ss_pred CCCCCCHHHHHHHHHHCC Q ss_conf 887579999999999729 Q gi|254780214|r 214 HSSHFSLSESLKKIELIN 231 (271) Q Consensus 214 ~~~H~~~~ea~~~~~~~~ 231 (271) |.+|.++.||.++++++. T Consensus 116 hkghttL~Ea~ql~k~lS 133 (176) T d2atza1 116 HKGHTELGEGERLVKTLS 133 (176) T ss_dssp CCCSEEHHHHHHHHHHHH T ss_pred EECCCCHHHHHHHHHHHH T ss_conf 708663889999999999 No 40 >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} Probab=20.46 E-value=20 Score=13.15 Aligned_cols=15 Identities=27% Similarity=0.516 Sum_probs=13.2 Q ss_pred CCCEEEEEEEEECCC Q ss_conf 987259999854178 Q gi|254780214|r 1 MKDYYHFTILGCGAS 15 (271) Q Consensus 1 m~~~m~l~~LGtg~s 15 (271) |+..||+=++|||.- T Consensus 1 M~kkirvaIIGaG~i 15 (157) T d1nvmb1 1 MNQKLKVAIIGSGNI 15 (157) T ss_dssp CCSCEEEEEECCSHH T ss_pred CCCCCEEEEECCCHH T ss_conf 998767999868599 Done!