RPSBLAST alignment of GI: 254780214 and protein with PDBid: 2cbn
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Length = 306
Score = 52.8 bits (125), Expect = 8e-08
Identities = 43/320 (13%), Positives = 78/320 (24%), Gaps = 75/320 (23%)
Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65
+ LG A + P R +++ + + + + D G
Sbjct: 3 NLIFLGTSAGV----------------PTRTRNVTAILL-NLQHPTQSGLWLFDCGEGTQ 45
Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFES 121
Q+L +D + +H H DH+ G+ +P+ +Y + + +
Sbjct: 46 HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETA 105
Query: 122 FRYCFKAL-----------------DDRTYPPIVNPIVIENNDVPICMKSAGGV------ 158
R R +E I A G
Sbjct: 106 LRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQAL 165
Query: 159 ----IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLD------------ 202
+ P+ Q+ ++ G D A P D
Sbjct: 166 KAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAK 225
Query: 203 ---------FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM---HVDLDYDMVL 250
L I H S ++ I+TH+ + D +L
Sbjct: 226 GVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLL 285
Query: 251 ---KSTPSRVVPAFDGMQFS 267
+S A D F+
Sbjct: 286 RECRSIFPATELANDFTVFN 305