RPSBLAST alignment of GI: 254780214 and protein with PDBid: 2cbn

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Length = 306
 Score = 52.8 bits (125), Expect = 8e-08
 Identities = 43/320 (13%), Positives = 78/320 (24%), Gaps = 75/320 (23%)

Query: 6   HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65
           +   LG  A +                P   R  +++ +  +     +   + D G    
Sbjct: 3   NLIFLGTSAGV----------------PTRTRNVTAILL-NLQHPTQSGLWLFDCGEGTQ 45

Query: 66  MQVLREQV--LSIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFES 121
            Q+L        +D +  +H H DH+ G+             +P+ +Y      + +  +
Sbjct: 46  HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETA 105

Query: 122 FRYCFKAL-----------------DDRTYPPIVNPIVIENNDVPICMKSAGGV------ 158
            R                         R          +E     I    A G       
Sbjct: 106 LRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQAL 165

Query: 159 ----IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLD------------ 202
               +   P+ Q+     ++    G      D  A P          D            
Sbjct: 166 KAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAK 225

Query: 203 ---------FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM---HVDLDYDMVL 250
                     L I          H S  ++            I+TH+   + D     +L
Sbjct: 226 GVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLL 285

Query: 251 ---KSTPSRVVPAFDGMQFS 267
              +S       A D   F+
Sbjct: 286 RECRSIFPATELANDFTVFN 305