HHsearch alignment for GI: 254780215 and conserved domain: COG0804
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism].
Probab=92.22 E-value=0.9 Score=25.85 Aligned_cols=105 Identities=18% Similarity=0.285 Sum_probs=64.3
Q ss_pred EEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEEC-----------CCHHHH--HHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 68613888756522689999999986998999916-----------798778--99999998557233211244544334
Q gi|254780215|r 3 IDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIA-----------IKVKDF--VPLIKLCQDYPSSIFCSVGTHPCHAH 69 (262)
Q Consensus 3 iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~-----------~~~~~~--~~~~~l~~~~p~~i~~a~GiHP~~~~ 69 (262)
T Consensus 132 iDtHiHfI~P-------qqi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d~~p~N~-g~lgK---Gn~ 200 (568)
T COG0804 132 IDTHIHFICP-------QQIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAADGLPMNI-GFLGK---GNA 200 (568)
T ss_pred CCCEEEEECH-------HHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE-EEEEC---CCC
T ss_conf 3212688667-------889999863867886486687777654011587879999998622485356-77624---777
Q ss_pred CCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH
Q ss_conf 46788998853100133321004467755332211102467899998766420442033000
Q gi|254780215|r 70 EENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR 131 (262)
Q Consensus 70 ~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r 131 (262)
T Consensus 201 s~~~~L~Eqi~----------aGa~GlKlHE---DWG~TpaaI~~~L~VAD~~DvqVaiHtD 249 (568)
T COG0804 201 SNPAPLAEQIE----------AGAIGLKLHE---DWGATPAAIDTCLSVADEYDVQVAIHTD 249 (568)
T ss_pred CCCHHHHHHHH----------HCCCEEEEEC---CCCCCHHHHHHHHHHHHHHCEEEEEEEC
T ss_conf 89566899986----------0541357611---1489879999887643311637999606