HHsearch alignment for GI: 254780215 and conserved domain: PRK01211
>PRK01211 dihydroorotase; Provisional.
Probab=97.62 E-value=0.0079 Score=39.53 Aligned_cols=231 Identities=14% Similarity=0.183 Sum_probs=111.8
Q ss_pred EEEEECCCCCHH--HHCCHHHHHHHHHHCCCCEEEEECC------CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 168613888756--5226899999999869989999167------98778999999985572332112445443344678
Q gi|254780215|r 2 LIDTHCHLLLPD--FDEDRHDVIMRAHQANVLKMIAIAI------KVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENE 73 (262)
Q Consensus 2 ~iD~H~HL~~~~--~~~d~~~~i~~a~~~gv~~~i~~~~------~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~ 73 (262)
T Consensus 50 ~ID~HvH~rePG~~~kEd~~tgs~AAa~GGvTtv~~mPnt~ppi~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~- 125 (413)
T PRK01211 50 ATDIHVHFRTPGETYKEDFSTGSLSAIFGGTTTVMDMPNNKIPIDDYNAFSDKLGIISR---TSYCDFGLYSMETGDNS- 125 (413)
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHC---CCEEEEEEEEEECCCCH-
T ss_conf 77996026999943032099999999829918999889999996779999999997404---75467887871237425-
Q ss_pred HHHHHHHHHCCCCCCCEECCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCEEECHHHH------------------
Q ss_conf 8998853100133321004467755332211-102467899998766420442033000233------------------
Q gi|254780215|r 74 VLVDELVCLASHPRVVAIGETGLDRYHNAHT-IEEQKVVFLRHIEASRITGIPLVIHSRSAD------------------ 134 (262)
Q Consensus 74 ~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~-~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~------------------ 134 (262)
T Consensus 126 ----~~~~---------~~~~g~k~f~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~HaEd~~~~~~~~~~~~~~~~~~~~ 192 (413)
T PRK01211 126 ----LIID---------KRSIGLKVYLGGSTNTNGTDVITNEEISKINELNVPVFFHGEDEECLKKHQFEAKNLREHNLS 192 (413)
T ss_pred ----HHHH---------HHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCHHHCCCC
T ss_conf ----5443---------131031441056555564045459999999867992898535878876433045686563155
Q ss_pred ----HHH--HHHHHHHHHCCCCCCCCEECCCCHHHHHHH--------------HCCCCEEECCCCCCHHH-HHHHHHHHH
Q ss_conf ----357--999853100036753311214640234432--------------10352020233221133-322333321
Q gi|254780215|r 135 ----DDM--AAILQEEMKKGPFPFVIHCFSSSQKLADIC--------------LELGGYISFTGMITFPK-YDALRAIAR 193 (262)
Q Consensus 135 ----~~~--l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~--------------l~~g~y~S~~g~i~~~~-~~~~~e~v~ 193 (262)
T Consensus 193 rp~~~e~~av~~~~~~~~--~~~~~~h~s--s~e~~~~i~~Et~pHhL~l~de~~~g~~~k~nPPLRs~~d~~aL~~al~ 268 (413)
T PRK01211 193 RPIECEILAAEYVKNLDL--KTKIMAHVS--SPDVIGEFLREVTPHHLLLNDEMPLGSYGKVNPPLRDRSTQSRLLNSYI 268 (413)
T ss_pred CCHHHHHHHHHHHHHHHH--HCCEEEEEE--CHHHHHHHHHEECCEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHHH
T ss_conf 759999999999998764--338799994--6889877874204504871552016876166899989799999999874
Q ss_pred CCCCCCEEEEEC-CCCCCCCC--CC----CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 056671798307-86678777--68----87588244999999999872899899999999999998425
Q gi|254780215|r 194 GIPMDRVLVETD-SPYIVPVS--CQ----GKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262)
Q Consensus 194 ~iPldriLlETD-sP~l~p~~--~r----~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262)
T Consensus 269 dG~ID~I--aSDHaPh~~~eK~~f~~a~~G~~GlEt~lpl~l~~-v~~g~l~l~~lv~~~s~nPAki~gl 335 (413)
T PRK01211 269 SGNFDIL--SSDHAPHTENDKTEFEYAKSGIIGVETRIPLMLAL-VSKKILPLDVLYKTAIENPPSIFGI 335 (413)
T ss_pred CCCCCEE--EECCCCCCHHHCCCHHHCCCCCCCCCCHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 3998889--63788989466188645888987614389999999-8748979999999999999999599