HHsearch alignment for GI: 254780215 and conserved domain: PRK06846

Probab=97.33  E-value=0.0023  Score=43.11  Aligned_cols=198  Identities=15%  Similarity=0.056  Sum_probs=93.2

Q ss_pred             HHHHHHHHCCCCEE---EE--ECCCHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEE
Q ss_conf             99999998699899---99--16798778999999985572332---112445443344678899885310013332100
Q gi|254780215|r   20 DVIMRAHQANVLKM---IA--IAIKVKDFVPLIKLCQDYPSSIF---CSVGTHPCHAHEENEVLVDELVCLASHPRVVAI   91 (262)
Q Consensus        20 ~~i~~a~~~gv~~~---i~--~~~~~~~~~~~~~l~~~~p~~i~---~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aI   91 (262)
T Consensus       118 ~~l~~~~a~Gtt~iRTHvDvdp~~gl~~lea~~~~~e~~~~~i~lqiVAFPQ~Gll~-~~~---~~Ll~eAl~~G-ad~v  192 (410)
T PRK06846        118 KLIELLLSNGATIIRSHCNIDPVIGLKNLENTQAALERYQDGFEYEIVAFPQHGLLR-SNS---EPLMREAMQMG-AHLV  192 (410)
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC-CCH---HHHHHHHHHHC-CCEE
T ss_conf             999999973906187655447751135899999999984422106689710467567-447---99999999858-9679


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHH---HHHHHHHHHHH--CCCCCCC-CEECCC---CHH
Q ss_conf             44677553322111024678999987664204420330002333---57999853100--0367533-112146---402
Q gi|254780215|r   92 GETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADD---DMAAILQEEMK--KGPFPFV-IHCFSS---SQK  162 (262)
Q Consensus        92 GEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~---~~l~iL~~~~~--~~~~~~i-~H~FsG---~~~  162 (262)
T Consensus       193 G--GvdP~~~d~d~~---~~L~~~f~LA~~~~~~vD~HldE~~d~~~~~l~~la~~t~~~g~~grVt~sH~~sL~~~~~~  267 (410)
T PRK06846        193 G--GVDPATVDGAIE---KSLDTMFQIAVEFNKGVDIHLHDTNPLGVATIKKLVETTEEAQWKGRVTISHAFALGDLNEE  267 (410)
T ss_pred             E--EECCCCCCCCHH---HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCHH
T ss_conf             8--437766785799---99999999999809992363158898477899999999998299898883734446439999


Q ss_pred             HHHHHHC----CCCEEECCCCCCHHHH---HHHHHHHHCCCCCCEEEEECC---CCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             3443210----3520202332211333---223333210566717983078---66787776887588244999999999
Q gi|254780215|r  163 LADICLE----LGGYISFTGMITFPKY---DALRAIARGIPMDRVLVETDS---PYIVPVSCQGKRNEPAYVVNTAKALA  232 (262)
Q Consensus       163 ~~~~~l~----~g~y~S~~g~i~~~~~---~~~~e~v~~iPldriLlETDs---P~l~p~~~r~~~n~P~~i~~~~~~iA  232 (262)
T Consensus       268 ~~~~~~~~la~agI~v--vs--t~P~~r~v~pv~eL~~-aG-V~V~~g~Dni~Dpw~---P~G--~---gD~Le~a~~~a  333 (410)
T PRK06846        268 EVEELAERLAAQQISI--TS--TVPIGRLHMPLPLLHE-KG-VKVSLGTDSVTDHWS---PFG--T---GDMLEKANLYA  333 (410)
T ss_pred             HHHHHHHHHHHCCCEE--EE--ECCCCCCCCCHHHHHH-CC-CEEEEECCCCCCCCC---CCC--C---CCHHHHHHHHH
T ss_conf             9999999999859939--98--5899899787999997-69-919982688868987---888--8---88999999999


Q ss_pred             HHHCCCHHH
Q ss_conf             872899899
Q gi|254780215|r  233 KEKDVSYED  241 (262)
Q Consensus       233 ~i~~~~~ee  241 (262)
T Consensus       334 ~~~~~~~~~  342 (410)
T PRK06846        334 ERYRWIDEQ  342 (410)
T ss_pred             HHHCCCCHH
T ss_conf             986899889