HHsearch alignment for GI: 254780215 and conserved domain: cd01294

>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=97.90  E-value=0.003  Score=42.31  Aligned_cols=237  Identities=15%  Similarity=0.205  Sum_probs=111.3

Q ss_pred             EEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEE-CCCHH--HHHHHHHH----HHHCC-CCCCCCCCCCCCCCCCCCH
Q ss_conf             16861388875652268999999998699899991-67987--78999999----98557-2332112445443344678
Q gi|254780215|r    2 LIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAI-AIKVK--DFVPLIKL----CQDYP-SSIFCSVGTHPCHAHEENE   73 (262)
Q Consensus         2 ~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~-~~~~~--~~~~~~~l----~~~~p-~~i~~a~GiHP~~~~~~~~   73 (262)
T Consensus         6 ~iD~HVHlRe----g~~~~~~~~a~a~G~t~v~~MPNT~Ppi~~~~~~~~y~~~i~~~~~~~~~~~~~~~~l--t~~~~~   79 (335)
T cd01294           6 PDDMHLHLRD----GAMLKLVLPYTARGFSRAIVMPNLKPPVTTTADALAYRERILAADPGPNFTPLMTLYL--TENTTP   79 (335)
T ss_pred             CCEEEEECCC----CHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEE--CCCCCH
T ss_conf             8661443789----6258889999837786999899999998999999999999997388983657888860--589999


Q ss_pred             HHHHHHHHHCCCCCCCEE-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH---------HHHHHHHH
Q ss_conf             899885310013332100-----4467755332211102467899998766420442033000---------23335799
Q gi|254780215|r   74 VLVDELVCLASHPRVVAI-----GETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR---------SADDDMAA  139 (262)
Q Consensus        74 ~~~~~l~~l~~~~~~~aI-----GEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r---------~a~~~~l~  139 (262)
T Consensus        80 ~e---l~~~~~~~~v~giK~y~~gattns--~~G--v-~~~~~~~~~~e~~~~~~~~l~~H~E~~~~~~~~~~~E~~~i~  151 (335)
T cd01294          80 EE---LREAKKKGGIRGVKLYPAGATTNS--QGG--V-TDLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREAKFIP  151 (335)
T ss_pred             HH---HHHHHHCCCCCEEEECCCCCCCCC--CCC--C-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH
T ss_conf             99---997665278554662146860046--557--6-558999999999986699677747658875660367887678


Q ss_pred             HHHHHHHC-CCCCCCC-EECC-CCHHHHHHHHCC-C-----CEEEC----------------CCCCCHHH-HHHHHHHHH
Q ss_conf             98531000-3675331-1214-640234432103-5-----20202----------------33221133-322333321
Q gi|254780215|r  140 ILQEEMKK-GPFPFVI-HCFS-SSQKLADICLEL-G-----GYISF----------------TGMITFPK-YDALRAIAR  193 (262)
Q Consensus       140 iL~~~~~~-~~~~~i~-H~Fs-G~~~~~~~~l~~-g-----~y~S~----------------~g~i~~~~-~~~~~e~v~  193 (262)
T Consensus       152 ~~~~l~~~~~~l~ihi~HIST~~~ve~ik~~~~~VtaEVTPHHL~lt~~d~~~~~~~~~~kcnPplR~~~Dr~AL~~al~  231 (335)
T cd01294         152 VLEPLAQRFPKLKIVLEHITTADAVEYVKSCNENVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAAT  231 (335)
T ss_pred             HHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCEEEEEHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             78999986888769998438599999999589970488733215751678744485800032999899899999999997


Q ss_pred             CCCCCCEEEEECC-CCCCC-----CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             0566717983078-66787-----77688758824499999999987289989999999999999842
Q gi|254780215|r  194 GIPMDRVLVETDS-PYIVP-----VSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS  255 (262)
Q Consensus       194 ~iPldriLlETDs-P~l~p-----~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~  255 (262)
T Consensus       232 ~-G~id~~iaTDHAPH~~~eKe~~~~~AGi~~~~~al~~l~~~f~~--~~~l~~l~~f~s~n~a~~~g  296 (335)
T cd01294         232 S-GHPKFFLGSDSAPHPKSNKESSCGCAGIFSAPIALPYLAEVFEE--HNALDKLEAFASDNGPNFYG  296 (335)
T ss_pred             C-CCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHC
T ss_conf             4-99848984799998645524889999815788899999999980--48499999998465798809