HHsearch alignment for GI: 254780215 and conserved domain: cd01298
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=97.91 E-value=0.0028 Score=42.56 Aligned_cols=140 Identities=19% Similarity=0.169 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-----------HHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECC
Q ss_conf 678999987664204420330002333579998-----------531000367533112146402344321035202023
Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDDMAAIL-----------QEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFT 177 (262)
Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL-----------~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~ 177 (262)
T Consensus 193 ~~~~~~~~~~a~~~~~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~~~~~~~~ 272 (411)
T cd01298 193 DELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGKRPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHN 272 (411)
T ss_pred HHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEC
T ss_conf 99999999999975994998422459999999999598699999873656876441046732366999998559705546
Q ss_pred CCCCHHHH---HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----HHCCCHHHHHHHHHHH
Q ss_conf 32211333---223333210566717983078667877768875882449999999998-----7289989999999999
Q gi|254780215|r 178 GMITFPKY---DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAK-----EKDVSYEDLMEETTKN 249 (262)
Q Consensus 178 g~i~~~~~---~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~-----i~~~~~eei~~~~~~N 249 (262)
T Consensus 273 p~~~~~l~~~~~~~~~l~~~--Gv~v~igTD~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~s~~eal~~~T~n 344 (411)
T cd01298 273 PASNMKLASGIAPVPEMLEA--GVNVGLGTDGAASNNN-----L-DMFEEMRLAALLQKLAHGDPTALPAEEALEMATIG 344 (411)
T ss_pred CCCCCCCCCCCCHHHHHHHC--CCCEEEECCCCCCCCC-----C-CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 64100134578539999875--9957995688988997-----4-68999999999999752677789999999999999
Q ss_pred HHHHHHH
Q ss_conf 9998425
Q gi|254780215|r 250 ALKLFSK 256 (262)
Q Consensus 250 ~~~~f~~ 256 (262)
T Consensus 345 ~A~~lgl 351 (411)
T cd01298 345 GAKALGL 351 (411)
T ss_pred HHHHHCC
T ss_conf 9999498