HHsearch alignment for GI: 254780215 and conserved domain: cd01309
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=94.72 E-value=0.42 Score=28.06 Aligned_cols=120 Identities=23% Similarity=0.249 Sum_probs=65.0
Q ss_pred CCCCCEEECHHHH--HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHH-HHHHHH-------HH
Q ss_conf 0442033000233--3579998531000367533112146402344321035202023322113-332233-------33
Q gi|254780215|r 122 TGIPLVIHSRSAD--DDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFP-KYDALR-------AI 191 (262)
Q Consensus 122 ~~~pv~iH~r~a~--~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~-~~~~~~-------e~ 191 (262)
T Consensus 191 ~~~~~~~h~~~~~~~~~~~~~~~~~---~~~~~~~h~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
T cd01309 191 GEIPVRIHAHRADDILTAIRIAKEF---GIKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYL 266 (359)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHC---CCCEEEEECCHH-HHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9972999967678999999999864---984799733018-779999997499689684201331136554004558999
Q ss_pred HHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 210566717983078667877768875882449999999998728998999999999999984256
Q gi|254780215|r 192 ARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKI 257 (262)
Q Consensus 192 v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~ 257 (262)
T Consensus 267 ~~~-~gv~~~~~tD~~~~~-~---------~~~~~~~~~~~~-~Gl~~~eal~~aT~n~A~~lgl~ 320 (359)
T cd01309 267 LKK-GGVAFAISSDHPVLN-I---------RNLNLEAAKAVK-YGLSYEEALKAITINPAKILGIE 320 (359)
T ss_pred HHH-CCCEEEEECCCCCCH-H---------HHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 981-995499966887541-7---------599999999998-09999999999999999994998