HHsearch results for GI: 254780215 and protein with PDBid: 1yix_A
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX research center for structural genomics, NYSGXRC, structural genomics, PSI; 1.90A {Escherichia coli K12} SCOP: c.1.9.12
Probab=100.00 E-value=0 Score=508.59 Aligned_cols=253 Identities=39% Similarity=0.620 Sum_probs=236.4
Q ss_pred CEEEEECCCCCH---HHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 916861388875---65226899999999869989999167987789999999855723321124454433446788998
Q gi|254780215|r 1 MLIDTHCHLLLP---DFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVD 77 (262)
Q Consensus 1 M~iD~H~HL~~~---~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~ 77 (262)
||||+||||+.. .+.+|+++++++|..+||.+++++|+++++|.++.+++++|| .+++++|+|||++....+ ++
T Consensus 2 ~liDtH~Hl~~~~~e~~~~d~~~vi~~a~~~gv~~ii~~~~~~~~~~~~~~l~~~~~-~i~~~~GiHP~~~~~~~~--~e 78 (265)
T 1yix_A 2 FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPSYLHMRDLVGERD-NVVFSCGVHPLNQNDPYD--VE 78 (265)
T ss_dssp CEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSSHHHHHHHHHHHCSCT-TEEEEECCCTTCCSSCCC--HH
T ss_pred EEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEEECCCCCCCCHHH--HH
T ss_conf 699860258863343012389999999998599899994289999999999997489-848997478632178778--99
Q ss_pred HHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEEC
Q ss_conf 85310013332100446775533221110246789999876642044203300023335799985310003675331121
Q gi|254780215|r 78 ELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCF 157 (262)
Q Consensus 78 ~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~F 157 (262)
.+.+++.+++++|||||||||+++..+.+.|+++|++||++|+++++||+||||+|+++++++++++.. ...++|+|||
T Consensus 79 ~l~~l~~~~~~vaiGEiGLD~~~~~~~~~~Q~~~f~~ql~lA~~~~~Pv~iH~r~a~~~~~~il~~~~~-~~~~~i~H~f 157 (265)
T 1yix_A 79 DLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKV-TDCGGVLHCF 157 (265)
T ss_dssp HHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHTTG-GGTCEEETTC
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCEEEEEE
T ss_conf 999974257715765305886644331688999999999999874998411331158999999998347-8865389840
Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 46402344321035202023322113332233332105667179830786678777688758824499999999987289
Q gi|254780215|r 158 SSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDV 237 (262)
Q Consensus 158 sG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~ 237 (262)
||+.+++++++++||||||||.+++++++++|++++.+|+||||+||||||++|.|+||++|+|++++.|++++|++||+
T Consensus 158 sG~~~~a~~~l~~g~~isi~g~~~~~~~~~~~~~v~~iPldrlLlETD~P~~~p~~~rg~~n~P~~l~~v~~~iA~l~~~ 237 (265)
T 1yix_A 158 TEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGV 237 (265)
T ss_dssp CSCHHHHHHHHTTTCEEEECGGGGSTTCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 69999999999869879125544413479999999850434457613786567655589888569999999999988498
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 989999999999999842568
Q gi|254780215|r 238 SYEDLMEETTKNALKLFSKIS 258 (262)
Q Consensus 238 ~~eei~~~~~~N~~~~f~~~~ 258 (262)
+.+++++++++|+++||| ++
T Consensus 238 ~~eel~~~~~~N~~~lf~-i~ 257 (265)
T 1yix_A 238 AVEELAQVTTDNFARLFH-ID 257 (265)
T ss_dssp CHHHHHHHHHHHHHHHTT-CC
T ss_pred CHHHHHHHHHHHHHHHHC-CC
T ss_conf 999999999999999959-99