RPSBLAST alignment of GI: 254780215 and protein with PDBid: 3e2v
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.50A {Saccharomyces cerevisiae YJM789} Length = 401
Score = 174 bits (441), Expect = 2e-44
Identities = 68/379 (17%), Positives = 110/379 (29%), Gaps = 126/379 (33%)
Query: 2 LIDTHCHLLLPDF----------DEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQ 51
D +L P F D ++ RA Q +V + + + I+L
Sbjct: 14 YYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIELVS 73
Query: 52 DY----PSSIFCSVGTHPCHAHEENEVLVDELVC-------------------------- 81
P ++ ++G HPC +E + +
Sbjct: 74 SVKDLSPLKLYHTIGVHPCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSF 133
Query: 82 ----------------LASHPRVVAIGETGLDRYH-NAHTIEEQKVVFLRHIEASRITG- 123
+IGE GLD + + E QKV F ++ S +
Sbjct: 134 AQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDK 193
Query: 124 ---IPLVIHSRSADDDMAAILQEEM-------------------------KKGPFPFVIH 155
PL +H RSA DD IL+ + V+H
Sbjct: 194 LSSYPLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVH 253
Query: 156 CFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQ 215
F+ S L L I + + A+ + IP +R+L+ETD+P+
Sbjct: 254 SFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTH 313
Query: 216 GK----------------------------------------RNEPAYVVNTAKALAKEK 235
RNEP + A +++ K
Sbjct: 314 ASFQYLAKYQEVRDFEYPAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVK 373
Query: 236 DVSYEDLMEETTKNALKLF 254
DV L++ T K K+F
Sbjct: 374 DVDLATLIDTTWKTTCKIF 392