HHsearch alignment for GI: 254780217 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=98.56 E-value=2.9e-06 Score=70.03 Aligned_cols=175 Identities=18% Similarity=0.116 Sum_probs=107.9
Q ss_pred CCCHHHHCCHHHHHHHHHHHHHC------------CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
Q ss_conf 87565610929999999999982------------889816631179898889999999999817799886431210126
Q gi|254780217|r 8 PVYNQRLFGHEDIEKFLSQYYCS------------GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPD 75 (347)
Q Consensus 8 p~~~~~i~G~~~~~~~L~~~~~~------------~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~ 75 (347)
T Consensus 238 ~v~~~diggl~~~k~~l~e~v~~~~~~~e~~~~~~~~~~~giLl~GpPGtGKT~lAkava~~~~~~-------------- 303 (494)
T COG0464 238 DVTLDDIGGLEEAKEELKEAIETPLKRPELFRKLGLRPPKGVLLYGPPGTGKTLLAKAVALESRSR-------------- 303 (494)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC--------------
T ss_conf 851453236377999999999999970887632589888369998899975899999987544982--------------
Q ss_pred CCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC-----------H
Q ss_conf 78867999967898754530010001013421232378875544310222111121035322055424-----------0
Q gi|254780217|r 76 PCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN-----------R 144 (347)
Q Consensus 76 ~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln-----------~ 144 (347)
T Consensus 304 --------fi~v~~~~l~sk---~vGe--------sek~ir~~F~~A~----~~~p~iifiDEiDs~~~~r~~~~~~~~~ 360 (494)
T COG0464 304 --------FISVKGSELLSK---WVGE--------SEKNIRELFEKAR----KLAPSIIFIDEIDSLASGRGPSEDGSGR 360 (494)
T ss_pred --------EEEECCHHHHHH---HHHH--------HHHHHHHHHHHHH----HCCCCEEEHHHHHHHHCCCCCCCCCHHH
T ss_conf --------488433555407---7659--------9999999999999----6699889748866674128998763799
Q ss_pred HHHHHHHHHHH--HCCCCCCEEEEECCCCCCCHHHHC--EE-EEEECCCCCHHHHHHHHHHHCCC--C---CHHHHHHHH
Q ss_conf 00145677766--303434167650443357302520--36-98864799989999999972788--8---967899999
Q gi|254780217|r 145 NAANALLKSLE--EPPQKVLFILISHASPTILSTIRS--RC-LSIKFNSLSENNLYKALEQLKIM--G---WDSKRDFVK 214 (347)
Q Consensus 145 ~AaNALLK~LE--EPp~~t~fiLit~~~~~il~TI~S--Rc-~~i~f~~l~~~~~~~~L~~~~~~--~---~~~~~~~~~ 214 (347)
T Consensus 361 rv~~~ll~~~d~~e~~~~v~vi~aTN~p~~ld~a~lR~gRfd~~i~v~~pd~~~r~~i~~~~~~~~~~~~~~~~~~~~l~ 440 (494)
T COG0464 361 RVVGQLLTELDGIEKAEGVLVIAATNRPDDLDPALLRPGRFDRLIYVPLPDLEERLEIFKIHLRDKKPPLAEDVDLEELA 440 (494)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 99999999974754437648996479833268756243663037871798989999999998541565115564199999
Q ss_pred HHCCC
Q ss_conf 97598
Q gi|254780217|r 215 IAAYG 219 (347)
Q Consensus 215 ~~s~G 219 (347)
T Consensus 441 ~~t~~ 445 (494)
T COG0464 441 EITEG 445 (494)
T ss_pred HHHCC
T ss_conf 87527