HHsearch alignment for GI: 254780217 and conserved domain: COG1066
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones].
Probab=95.74 E-value=0.036 Score=37.12 Aligned_cols=38 Identities=29% Similarity=0.456 Sum_probs=27.1
Q ss_pred HHHHHHHCCCCC-EEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 999999828898-16631179898889999999999817
Q gi|254780217|r 23 FLSQYYCSGRMH-HALLFEGEQGIGKATLGFRYAGHVLQ 60 (347)
Q Consensus 23 ~L~~~~~~~~l~-ha~Lf~Gp~GiGK~~~A~~~A~~llc 60 (347)
T Consensus 81 EldRVLGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~ 119 (456)
T COG1066 81 ELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAK 119 (456)
T ss_pred HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 887653677236617997368987798999999999870