HHsearch alignment for GI: 254780217 and conserved domain: COG1241
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair].
Probab=96.39 E-value=0.004 Score=44.82 Aligned_cols=139 Identities=20% Similarity=0.202 Sum_probs=78.7
Q ss_pred HHHHCCHHHHHHHHHHHHHCCC---CC---------EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC
Q ss_conf 6561092999999999998288---98---------16631179898889999999999817799886431210126788
Q gi|254780217|r 11 NQRLFGHEDIEKFLSQYYCSGR---MH---------HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCS 78 (347)
Q Consensus 11 ~~~i~G~~~~~~~L~~~~~~~~---l~---------ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~ 78 (347)
T Consensus 285 aPsIyG~e~VKkAilLqLfgGv~k~~~~g~~iRGDIn-ILLvGDPgtaKSqlLk~v~~~a----Pr~vytsgkgss---- 355 (682)
T COG1241 285 APSIYGHEDVKKAILLQLFGGVKKNLPDGTRIRGDIH-ILLVGDPGTAKSQLLKYVAKLA----PRGVYTSGKGSS---- 355 (682)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE-EEECCCCCHHHHHHHHHHHHHC----CCEEEECCCCCC----
T ss_conf 1510381999999999960897664799862024226-9981798251999999988648----840797264125----
Q ss_pred HHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHH--HHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 6799996789875453001000101342123237887--55443102221111210353220554240001456777663
Q gi|254780217|r 79 PFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEI--RRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE 156 (347)
Q Consensus 79 ~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~I--R~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE 156 (347)
T Consensus 356 ----------~~GLTAa--------------v~rd~~tge~~LeaGALV--lAD~Gv~cIDEfdKm~~~dr~aihEaMEQ 409 (682)
T COG1241 356 ----------AAGLTAA--------------VVRDKVTGEWVLEAGALV--LADGGVCCIDEFDKMNEEDRVAIHEAMEQ 409 (682)
T ss_pred ----------CCCCEEE--------------EEECCCCCEEEEECCEEE--EECCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf ----------4573069--------------997067760788677799--92497799970567776789999999875
Q ss_pred CCCCCCEE---------------EEECCC--------------CCCCHHHHCEEEEEECC
Q ss_conf 03434167---------------650443--------------35730252036988647
Q gi|254780217|r 157 PPQKVLFI---------------LISHAS--------------PTILSTIRSRCLSIKFN 187 (347)
Q Consensus 157 Pp~~t~fi---------------Lit~~~--------------~~il~TI~SRc~~i~f~ 187 (347)
T Consensus 410 ---QtIsIaKAGI~atLnARcsvLAAaNP~~Gryd~~~~~~enI~l~~~lLSRFDLifvl 466 (682)
T COG1241 410 ---QTISIAKAGITATLNARCSVLAAANPKFGRYDPKKTVAENINLPAPLLSRFDLIFVL 466 (682)
T ss_pred ---CEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEE
T ss_conf ---275120554254111444456651887776799999788558983577517754770