HHsearch alignment for GI: 254780217 and conserved domain: COG1373

>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=95.59  E-value=0.12  Score=32.83  Aligned_cols=136  Identities=15%  Similarity=0.147  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCC
Q ss_conf             99999999998288981663117989888999999999981779988643121012678867999967898754530010
Q gi|254780217|r   19 DIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYS   98 (347)
Q Consensus        19 ~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~   98 (347)
T Consensus        24 ~~~~~l~~~~~~~~--~i~~i~GpR~~GKTtllk~l~~~~~~~------------------------------~iy~~~~   71 (398)
T COG1373          24 KLLPRLIKKLDLRP--FIILILGPRQVGKTTLLKLLIKGLLEE------------------------------IIYINFD   71 (398)
T ss_pred             HHHHHHHHHHCCCC--CEEEEECCCCCCHHHHHHHHHHHCCCC------------------------------EEEEECC
T ss_conf             67799876503578--549998886477899999999747773------------------------------5999736


Q ss_pred             CHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCC----CCC
Q ss_conf             0010134212323788755443102221111210353220554240001456777663034341676504433----573
Q gi|254780217|r   99 LNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASP----TIL  174 (347)
Q Consensus        99 ~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~~~----~il  174 (347)
T Consensus        72 d~~-~~~~---~l~d~~~~~~~~~~~-----~~~yifLDEIq~v-~~W~~~lk~l~d~~~~--~v~itgsss~ll~~~~s  139 (398)
T COG1373          72 DLR-LDRI---ELLDLLRAYIELKER-----EKSYIFLDEIQNV-PDWERALKYLYDRGNL--DVLITGSSSSLLSKEIS  139 (398)
T ss_pred             CCC-CCHH---HHHHHHHHHHHHHCC-----CCCEEEEEEECCC-HHHHHHHHHHHCCCCC--EEEEECCCHHHHCCCHH
T ss_conf             200-0135---677899999985222-----5745999833376-1089999999756775--09998371675413302


Q ss_pred             HHHHCEEEEEECCCCCHHHHHHHH
Q ss_conf             025203698864799989999999
Q gi|254780217|r  175 STIRSRCLSIKFNSLSENNLYKAL  198 (347)
Q Consensus       175 ~TI~SRc~~i~f~~l~~~~~~~~L  198 (347)
T Consensus       140 ~~L~GR~~~~~l~PlSF~Efl~~~  163 (398)
T COG1373         140 ESLAGRGKDLELYPLSFREFLKLK  163 (398)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHC
T ss_conf             324998237898488889986413