HHsearch alignment for GI: 254780217 and conserved domain: COG1373
>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=95.59 E-value=0.12 Score=32.83 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCC
Q ss_conf 99999999998288981663117989888999999999981779988643121012678867999967898754530010
Q gi|254780217|r 19 DIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYS 98 (347)
Q Consensus 19 ~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~ 98 (347)
T Consensus 24 ~~~~~l~~~~~~~~--~i~~i~GpR~~GKTtllk~l~~~~~~~------------------------------~iy~~~~ 71 (398)
T COG1373 24 KLLPRLIKKLDLRP--FIILILGPRQVGKTTLLKLLIKGLLEE------------------------------IIYINFD 71 (398)
T ss_pred HHHHHHHHHHCCCC--CEEEEECCCCCCHHHHHHHHHHHCCCC------------------------------EEEEECC
T ss_conf 67799876503578--549998886477899999999747773------------------------------5999736
Q ss_pred CHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCC----CCC
Q ss_conf 0010134212323788755443102221111210353220554240001456777663034341676504433----573
Q gi|254780217|r 99 LNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASP----TIL 174 (347)
Q Consensus 99 ~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~~~----~il 174 (347)
T Consensus 72 d~~-~~~~---~l~d~~~~~~~~~~~-----~~~yifLDEIq~v-~~W~~~lk~l~d~~~~--~v~itgsss~ll~~~~s 139 (398)
T COG1373 72 DLR-LDRI---ELLDLLRAYIELKER-----EKSYIFLDEIQNV-PDWERALKYLYDRGNL--DVLITGSSSSLLSKEIS 139 (398)
T ss_pred CCC-CCHH---HHHHHHHHHHHHHCC-----CCCEEEEEEECCC-HHHHHHHHHHHCCCCC--EEEEECCCHHHHCCCHH
T ss_conf 200-0135---677899999985222-----5745999833376-1089999999756775--09998371675413302
Q ss_pred HHHHCEEEEEECCCCCHHHHHHHH
Q ss_conf 025203698864799989999999
Q gi|254780217|r 175 STIRSRCLSIKFNSLSENNLYKAL 198 (347)
Q Consensus 175 ~TI~SRc~~i~f~~l~~~~~~~~L 198 (347)
T Consensus 140 ~~L~GR~~~~~l~PlSF~Efl~~~ 163 (398)
T COG1373 140 ESLAGRGKDLELYPLSFREFLKLK 163 (398)
T ss_pred HHCCCCEEEEEECCCCHHHHHHHC
T ss_conf 324998237898488889986413