HHsearch alignment for GI: 254780217 and conserved domain: COG2607
>COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=98.04 E-value=0.00033 Score=53.48 Aligned_cols=131 Identities=19% Similarity=0.246 Sum_probs=87.2
Q ss_pred CCCCCCCHHHHCCHHHHHHHHHH---HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHH
Q ss_conf 55558756561092999999999---998288981663117989888999999999981779988643121012678867
Q gi|254780217|r 4 RAFDPVYNQRLFGHEDIEKFLSQ---YYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPF 80 (347)
Q Consensus 4 ~~~~p~~~~~i~G~~~~~~~L~~---~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~ 80 (347)
T Consensus 52 ~~~~~i~L~~l~Gvd~qk~~L~~NT~~F~~G~pANnVLLwGaRGtGKSSLVKA~~~e~~--------------------- 110 (287)
T COG2607 52 PDPDPIDLADLVGVDRQKEALVRNTEQFAEGLPANNVLLWGARGTGKSSLVKALLNEYA--------------------- 110 (287)
T ss_pred CCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH---------------------
T ss_conf 98997678987273189999999899997288652367763777774799999999987---------------------
Q ss_pred HHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHH---HHHHHCCCCCCCCCCHHHHHHHHHHCCH---HHHHHHHHH-
Q ss_conf 999967898754530010001013421232378875---5443102221111210353220554240---001456777-
Q gi|254780217|r 81 VKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIR---RIRYFLSLTANTGYWRVIMIDPVDGMNR---NAANALLKS- 153 (347)
Q Consensus 81 ~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR---~l~~~~~~~~~~~~~Ki~IId~ad~ln~---~AaNALLK~- 153 (347)
T Consensus 111 ------~~glrLVEV~---------------k~dl~~Lp~l~~~Lr~~----~~kFIlF--cDDLSFe~gd~~yK~LKs~ 163 (287)
T COG2607 111 ------DEGLRLVEVD---------------KEDLATLPDLVELLRAR----PEKFILF--CDDLSFEEGDDAYKALKSA 163 (287)
T ss_pred ------HCCCEEEEEC---------------HHHHHHHHHHHHHHHCC----CCEEEEE--ECCCCCCCCCHHHHHHHHH
T ss_conf ------4177079976---------------88886579999999618----8608999--5677777781389999998
Q ss_pred ----HHHCCCCCCEEEEECCCCCCCHHHHCEEE
Q ss_conf ----66303434167650443357302520369
Q gi|254780217|r 154 ----LEEPPQKVLFILISHASPTILSTIRSRCL 182 (347)
Q Consensus 154 ----LEEPp~~t~fiLit~~~~~il~TI~SRc~ 182 (347)
T Consensus 164 LeG~ve~rP~NVl~YATSNRRHLl~e~~~dn~~ 196 (287)
T COG2607 164 LEGGVEGRPANVLFYATSNRRHLLPEDMKDNEG 196 (287)
T ss_pred HCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCC
T ss_conf 538855688707999715875336276642778