HHsearch alignment for GI: 254780217 and conserved domain: COG4988
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=93.29 E-value=0.22 Score=30.80 Aligned_cols=63 Identities=13% Similarity=0.199 Sum_probs=44.3
Q ss_pred CCCCCHHHHHH-HHHHCCCCCCCCCCHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 12323788755-44310222111121035322055-424000145677766303434167650443357
Q gi|254780217|r 107 RTVITVDEIRR-IRYFLSLTANTGYWRVIMIDPVD-GMNRNAANALLKSLEEPPQKVLFILISHASPTI 173 (347)
Q Consensus 107 ~~~I~vd~IR~-l~~~~~~~~~~~~~Ki~IId~ad-~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~i 173 (347)
T Consensus 454 G~~LSgGQ~QRlaLARAll~----~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~ 518 (559)
T COG4988 454 GAGLSGGQAQRLALARALLS----PASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDA 518 (559)
T ss_pred CCCCCHHHHHHHHHHHHHCC----CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHH
T ss_conf 88778999999999998558----888898548756798767999999999997278699997673778