HHsearch alignment for GI: 254780217 and conserved domain: KOG0478
>KOG0478 consensus.
Probab=96.93 E-value=0.0055 Score=43.68 Aligned_cols=140 Identities=19% Similarity=0.207 Sum_probs=80.3
Q ss_pred HHCCHHHHHHHHHHHHHCCC---CCE--------EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHH
Q ss_conf 61092999999999998288---981--------6631179898889999999999817799886431210126788679
Q gi|254780217|r 13 RLFGHEDIEKFLSQYYCSGR---MHH--------ALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFV 81 (347)
Q Consensus 13 ~i~G~~~~~~~L~~~~~~~~---l~h--------a~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~ 81 (347)
T Consensus 430 sIye~edvKkglLLqLfGGt~k~~~~~~~~R~~INILL~GDPGtsKSqlLqyv~~-l~pR---g~yTSGkGsS------- 498 (804)
T KOG0478 430 SIYELEDVKKGLLLQLFGGTRKEDEKSGRFRGDINILLVGDPGTSKSQLLQYCHR-LLPR---GVYTSGKGSS------- 498 (804)
T ss_pred HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH-HCCC---CEEECCCCCC-------
T ss_conf 6534422666677887568763223344424552289946998678999999997-4775---4040587630-------
Q ss_pred HHHHCCCCCCEE-EECCCCHHHCCCCCCCCCHHHHHHHH-HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC--
Q ss_conf 999678987545-30010001013421232378875544-31022211112103532205542400014567776630--
Q gi|254780217|r 82 KQMASHALHDFL-YLSYSLNPKTGKWRTVITVDEIRRIR-YFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEP-- 157 (347)
Q Consensus 82 ~~i~~~~hpd~~-~i~~~~~~k~~~~~~~I~vd~IR~l~-~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEP-- 157 (347)
T Consensus 499 -------avGLTayVtr--d~------------dtkqlVLesGALV--LSD~GiCCIDEFDKM~dStrSvLhEvMEQQTv 555 (804)
T KOG0478 499 -------AVGLTAYVTK--DP------------DTRQLVLESGALV--LSDNGICCIDEFDKMSDSTRSVLHEVMEQQTL 555 (804)
T ss_pred -------HHCCEEEEEE--CC------------CCCEEEEECCCEE--ECCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -------2200356776--57------------6554665048489--72896577112333327788999999987631
Q ss_pred -----------CCCCCEEEEECCCC--------------CCCHHHHCEEEEEECC
Q ss_conf -----------34341676504433--------------5730252036988647
Q gi|254780217|r 158 -----------PQKVLFILISHASP--------------TILSTIRSRCLSIKFN 187 (347)
Q Consensus 158 -----------p~~t~fiLit~~~~--------------~il~TI~SRc~~i~f~ 187 (347)
T Consensus 556 SIAKAGII~sLNAR~S-VLAaANP~~skynp~k~i~eNI~LpptLLSRFDLIyll 609 (804)
T KOG0478 556 SIAKAGIIASLNARCS-VLAAANPIRSKYNPNKSIIENINLPPTLLSRFDLIFLL 609 (804)
T ss_pred HHHHCCEEEECCCCCE-EEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHCEEEEE
T ss_conf 1743022342166530-34453543245799976232167880564323378998