HHsearch alignment for GI: 254780217 and conserved domain: KOG0740
>KOG0740 consensus.
Probab=97.67 E-value=0.00022 Score=54.94 Aligned_cols=175 Identities=18% Similarity=0.150 Sum_probs=99.7
Q ss_pred CCCCCCCHHHHCCHHHHHHHHHHHHHC-----------CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC-CCCCC-CHH
Q ss_conf 555587565610929999999999982-----------88981663117989888999999999981779-98864-312
Q gi|254780217|r 4 RAFDPVYNQRLFGHEDIEKFLSQYYCS-----------GRMHHALLFEGEQGIGKATLGFRYAGHVLQNP-DFSKA-PVR 70 (347)
Q Consensus 4 ~~~~p~~~~~i~G~~~~~~~L~~~~~~-----------~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~-~~~~~-~~~ 70 (347)
T Consensus 145 ~~~~~v~~~di~gl~~~k~~l~e~vi~p~lr~d~F~glr~p~rglLLfGPpgtGKtmL~~aiAsE~~atff~iSassLts 224 (428)
T KOG0740 145 DTLRNVGWDDIAGLEDAKQSLKEAVILPLLRPDLFLGLREPVRGLLLFGPPGTGKTMLAKAIATESGATFFNISASSLTS 224 (428)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHCCEEEECCHHHHHH
T ss_conf 02775413577405668998654232204553765235445311120058988447999999862066576306888653
Q ss_pred HCCCCC--CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC------
Q ss_conf 101267--886799996789875453001000101342123237887554431022211112103532205542------
Q gi|254780217|r 71 MCNPDP--CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGM------ 142 (347)
Q Consensus 71 ~~~~~~--~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~l------ 142 (347)
T Consensus 225 K~~Ge~eK~vralf~vAr~~qPs-----------------------------------------vifidEidslls~Rs~ 263 (428)
T KOG0740 225 KYVGESEKLVRALFKVARSLQPS-----------------------------------------VIFIDEIDSLLSKRSD 263 (428)
T ss_pred HCCCHHHHHHHHHHHHHHHCCCE-----------------------------------------EEEECHHHHHHHHCCC
T ss_conf 24670778999999998713970-----------------------------------------8984025678863687
Q ss_pred -----CHHHHHHHHHH----HHHCCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHH-----HHHHHCCCCCHH
Q ss_conf -----40001456777----6630343416765044335730252036988647999899999-----999727888967
Q gi|254780217|r 143 -----NRNAANALLKS----LEEPPQKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYK-----ALEQLKIMGWDS 208 (347)
Q Consensus 143 -----n~~AaNALLK~----LEEPp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~-----~L~~~~~~~~~~ 208 (347)
T Consensus 264 ~e~e~srr~ktefLiq~~~~~s~~~drvlvigaTN~P~e~Dea~~Rrf~kr~yiplPd~etr~~~~~~ll~~~~~~l~~~ 343 (428)
T KOG0740 264 NEHESSRRLKTEFLLQFDGKNSAPDDRVLVIGATNRPWELDEAARRRFVKRLYIPLPDYETRSLLWKQLLKEQPNGLSDL 343 (428)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 54544555655777654044578887079981588836778888887103155359887899999999997687874177
Q ss_pred HHHHHHHHCCC
Q ss_conf 89999997598
Q gi|254780217|r 209 KRDFVKIAAYG 219 (347)
Q Consensus 209 ~~~~~~~~s~G 219 (347)
T Consensus 344 d~~~l~~~Teg 354 (428)
T KOG0740 344 DISLLAKVTEG 354 (428)
T ss_pred HHHHHHHHHCC
T ss_conf 89999988617