HHsearch alignment for GI: 254780217 and conserved domain: KOG0741
>KOG0741 consensus.
Probab=97.10 E-value=0.0032 Score=45.59 Aligned_cols=156 Identities=22% Similarity=0.273 Sum_probs=77.6
Q ss_pred CHHHHCCHHH-HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCC
Q ss_conf 5656109299-999999999828898166311798988899999999998177998864312101267886799996789
Q gi|254780217|r 10 YNQRLFGHED-IEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHA 88 (347)
Q Consensus 10 ~~~~i~G~~~-~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 88 (347)
T Consensus 515 ~v~~il~~G~llv~qvk~s~~s-~l-vSvLl~Gp~~sGKTaLAA~iA~~-------S~FPF------------------- 566 (744)
T KOG0741 515 PVTRILDDGKLLVQQVKNSERS-PL-VSVLLEGPPGSGKTALAAKIALS-------SDFPF------------------- 566 (744)
T ss_pred CHHHHHHHHHHHHHHHHCCCCC-CC-EEEEEECCCCCCHHHHHHHHHHH-------CCCCE-------------------
T ss_conf 0778876688999986334667-63-58998669988768899999752-------79984-------------------
Q ss_pred CCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC----------HHHHHHHHHHHHHCC
Q ss_conf 8754530010001013421232378875544310222111121035322055424----------000145677766303
Q gi|254780217|r 89 LHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN----------RNAANALLKSLEEPP 158 (347)
Q Consensus 89 hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln----------~~AaNALLK~LEEPp 158 (347)
T Consensus 567 ---vKiiSpe---~miG~sEsaKc~~i~k~F~DAYkS~ls----iivvDdiErLiD~vpIGPRfSN~vlQaL~VllK~~p 636 (744)
T KOG0741 567 ---VKIISPE---DMIGLSESAKCAHIKKIFEDAYKSPLS----IIVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKQP 636 (744)
T ss_pred ---EEEECHH---HHCCCCHHHHHHHHHHHHHHHHCCCCE----EEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf ---7973778---703746678899999988876338650----899815565620024684035799999999952489
Q ss_pred CC--CCEEEEECCCCCCCHH-HHCEE--EEEECCCCCH-HHHHHHHHHHCC
Q ss_conf 43--4167650443357302-52036--9886479998-999999997278
Q gi|254780217|r 159 QK--VLFILISHASPTILST-IRSRC--LSIKFNSLSE-NNLYKALEQLKI 203 (347)
Q Consensus 159 ~~--t~fiLit~~~~~il~T-I~SRc--~~i~f~~l~~-~~~~~~L~~~~~ 203 (347)
T Consensus 637 pkg~kLli~~TTS~~~vL~~m~i~~~F~~~i~Vpnl~~~~~~~~vl~~~n~ 687 (744)
T KOG0741 637 PKGRKLLIFGTTSRREVLQEMGILDCFSSTIHVPNLTTGEQLLEVLEELNI 687 (744)
T ss_pred CCCCEEEEEECCCHHHHHHHCCHHHHHHHEEECCCCCCHHHHHHHHHHCCC
T ss_conf 888459999624079999972778751110546756864789999997166