HHsearch alignment for GI: 254780217 and conserved domain: KOG0742
>KOG0742 consensus.
Probab=98.38 E-value=2.9e-06 Score=70.09 Aligned_cols=154 Identities=23% Similarity=0.337 Sum_probs=102.8
Q ss_pred HHHHCCHHHHHHH---HHHHHHCCCCC----EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHH
Q ss_conf 6561092999999---99999828898----1663117989888999999999981779988643121012678867999
Q gi|254780217|r 11 NQRLFGHEDIEKF---LSQYYCSGRMH----HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQ 83 (347)
Q Consensus 11 ~~~i~G~~~~~~~---L~~~~~~~~l~----ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
T Consensus 354 l~~ViL~psLe~Rie~lA~aTaNTK~h~apfRNilfyGPPGTGKTm~ArelAr~S----G-lDY--------------A~ 414 (630)
T KOG0742 354 LEGVILHPSLEKRIEDLAIATANTKKHQAPFRNILFYGPPGTGKTMFARELARHS----G-LDY--------------AI 414 (630)
T ss_pred CCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHC----C-CCE--------------EH
T ss_conf 6784127779999999988740430024304400324799986049999998852----8-741--------------00
Q ss_pred HHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH---------CC---HHHHHHHH
Q ss_conf 9678987545300100010134212323788755443102221111210353220554---------24---00014567
Q gi|254780217|r 84 MASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDG---------MN---RNAANALL 151 (347)
Q Consensus 84 i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~---------ln---~~AaNALL 151 (347)
T Consensus 415 mTGG---DVAPlG--------~----qaVTkiH~lFDWakkS-~rG--LllFIDEADAFLceRnktymSEaqRsaLNAlL 476 (630)
T KOG0742 415 MTGG---DVAPLG--------A----QAVTKIHKLFDWAKKS-RRG--LLLFIDEADAFLCERNKTYMSEAQRSALNALL 476 (630)
T ss_pred HCCC---CCCCCH--------H----HHHHHHHHHHHHHHHC-CCC--EEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 1378---755521--------7----8899999987887515-664--49986116789987520102588999998898
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCHHHHCEE-EEEECCCCCHHHHHHHHHHH
Q ss_conf 776630343416765044335730252036-98864799989999999972
Q gi|254780217|r 152 KSLEEPPQKVLFILISHASPTILSTIRSRC-LSIKFNSLSENNLYKALEQL 201 (347)
Q Consensus 152 K~LEEPp~~t~fiLit~~~~~il~TI~SRc-~~i~f~~l~~~~~~~~L~~~ 201 (347)
T Consensus 477 fRTGdqSrdivLvlAtNrpgdlDsAV~DRide~veFpLPGeEERfkll~lY 527 (630)
T KOG0742 477 FRTGDQSRDIVLVLATNRPGDLDSAVNDRIDEVVEFPLPGEEERFKLLNLY 527 (630)
T ss_pred HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
T ss_conf 762565542689960588321016787655541306899778999999999