HHsearch alignment for GI: 254780217 and conserved domain: KOG0742

>KOG0742 consensus.
Probab=98.38  E-value=2.9e-06  Score=70.09  Aligned_cols=154  Identities=23%  Similarity=0.337  Sum_probs=102.8

Q ss_pred             HHHHCCHHHHHHH---HHHHHHCCCCC----EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHH
Q ss_conf             6561092999999---99999828898----1663117989888999999999981779988643121012678867999
Q gi|254780217|r   11 NQRLFGHEDIEKF---LSQYYCSGRMH----HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQ   83 (347)
Q Consensus        11 ~~~i~G~~~~~~~---L~~~~~~~~l~----ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~   83 (347)
T Consensus       354 l~~ViL~psLe~Rie~lA~aTaNTK~h~apfRNilfyGPPGTGKTm~ArelAr~S----G-lDY--------------A~  414 (630)
T KOG0742         354 LEGVILHPSLEKRIEDLAIATANTKKHQAPFRNILFYGPPGTGKTMFARELARHS----G-LDY--------------AI  414 (630)
T ss_pred             CCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHC----C-CCE--------------EH
T ss_conf             6784127779999999988740430024304400324799986049999998852----8-741--------------00


Q ss_pred             HHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH---------CC---HHHHHHHH
Q ss_conf             9678987545300100010134212323788755443102221111210353220554---------24---00014567
Q gi|254780217|r   84 MASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDG---------MN---RNAANALL  151 (347)
Q Consensus        84 i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~---------ln---~~AaNALL  151 (347)
T Consensus       415 mTGG---DVAPlG--------~----qaVTkiH~lFDWakkS-~rG--LllFIDEADAFLceRnktymSEaqRsaLNAlL  476 (630)
T KOG0742         415 MTGG---DVAPLG--------A----QAVTKIHKLFDWAKKS-RRG--LLLFIDEADAFLCERNKTYMSEAQRSALNALL  476 (630)
T ss_pred             HCCC---CCCCCH--------H----HHHHHHHHHHHHHHHC-CCC--EEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             1378---755521--------7----8899999987887515-664--49986116789987520102588999998898


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCCHHHHCEE-EEEECCCCCHHHHHHHHHHH
Q ss_conf             776630343416765044335730252036-98864799989999999972
Q gi|254780217|r  152 KSLEEPPQKVLFILISHASPTILSTIRSRC-LSIKFNSLSENNLYKALEQL  201 (347)
Q Consensus       152 K~LEEPp~~t~fiLit~~~~~il~TI~SRc-~~i~f~~l~~~~~~~~L~~~  201 (347)
T Consensus       477 fRTGdqSrdivLvlAtNrpgdlDsAV~DRide~veFpLPGeEERfkll~lY  527 (630)
T KOG0742         477 FRTGDQSRDIVLVLATNRPGDLDSAVNDRIDEVVEFPLPGEEERFKLLNLY  527 (630)
T ss_pred             HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
T ss_conf             762565542689960588321016787655541306899778999999999