HHsearch alignment for GI: 254780217 and conserved domain: KOG2004
>KOG2004 consensus.
Probab=98.31 E-value=1.6e-05 Score=64.08 Aligned_cols=157 Identities=23% Similarity=0.328 Sum_probs=97.0
Q ss_pred HHHCCHHHHHHHHHHHHHCCCCC-----EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHC
Q ss_conf 56109299999999999828898-----1663117989888999999999981779988643121012678867999967
Q gi|254780217|r 12 QRLFGHEDIEKFLSQYYCSGRMH-----HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMAS 86 (347)
Q Consensus 12 ~~i~G~~~~~~~L~~~~~~~~l~-----ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (347)
T Consensus 411 eDHYgm~dVKeRILEfiAV~kLrgs~qGkIlCf~GPPGVGKTSI~kSIA~ALnRkFf--RfSvGG~--------tDvAeI 480 (906)
T KOG2004 411 EDHYGMEDVKERILEFIAVGKLRGSVQGKILCFVGPPGVGKTSIAKSIARALNRKFF--RFSVGGM--------TDVAEI 480 (906)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEE--EEECCCC--------CCHHHH
T ss_conf 653016889999999999875146678837998689987732189999998487469--9853663--------427764
Q ss_pred CCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH----HHHHHHHHHHHHCC----
Q ss_conf 8987545300100010134212323788755443102221111210353220554240----00145677766303----
Q gi|254780217|r 87 HALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNR----NAANALLKSLEEPP---- 158 (347)
Q Consensus 87 ~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~----~AaNALLK~LEEPp---- 158 (347)
T Consensus 481 kGHRRTYV-G--AMPG--------------kiIq~LK~v~t~N--PliLiDEvDKlG~g~qGDPasALLElLD-PEQNan 540 (906)
T KOG2004 481 KGHRRTYV-G--AMPG--------------KIIQCLKKVKTEN--PLILIDEVDKLGSGHQGDPASALLELLD-PEQNAN 540 (906)
T ss_pred CCCCEEEE-C--CCCH--------------HHHHHHHHHCCCC--CEEEEEHHHHHCCCCCCCHHHHHHHHCC-HHHCCC
T ss_conf 25421100-1--4884--------------8999998617788--6588532234178877986899987439-653553
Q ss_pred ------------CCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHH
Q ss_conf ------------4341676504433573025203698864799989999999
Q gi|254780217|r 159 ------------QKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKAL 198 (347)
Q Consensus 159 ------------~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L 198 (347)
T Consensus 541 FlDHYLdVp~DLSkVLFicTAN~idtIP~pLlDRMEvIelsGYv~eEKv~IA 592 (906)
T KOG2004 541 FLDHYLDVPVDLSKVLFICTANVIDTIPPPLLDRMEVIELSGYVAEEKVKIA 592 (906)
T ss_pred HHHHCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHEEECCCCCHHHHHHHH
T ss_conf 4542026642111068898536445698566412232203672279899999