HHsearch alignment for GI: 254780217 and conserved domain: PRK05201
>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.
Probab=98.52 E-value=2.1e-06 Score=71.16 Aligned_cols=70 Identities=16% Similarity=0.407 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHCCH------------HHHHHHHHHHHHCCCC--------CCEEEEE------CCCCCCCHHHHCEE-EE
Q ss_conf 10353220554240------------0014567776630343--------4167650------44335730252036-98
Q gi|254780217|r 131 WRVIMIDPVDGMNR------------NAANALLKSLEEPPQK--------VLFILIS------HASPTILSTIRSRC-LS 183 (347)
Q Consensus 131 ~Ki~IId~ad~ln~------------~AaNALLK~LEEPp~~--------t~fiLit------~~~~~il~TI~SRc-~~ 183 (347)
T Consensus 249 ~GIVFIDEIDKIa~~~~~~g~DVS~EGVQrdLLpivEGt~V~tK~G~V~TdhILFIasGAFh~sKPSDLIPEl~GRlPv~ 328 (442)
T PRK05201 249 NGIVFIDEIDKIAKRGEGSGPDVSREGVQRDLLPLVEGSTVSTKYGMVKTDHILFIASGAFHVAKPSDLIPELQGRFPIR 328 (442)
T ss_pred CCCEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEE
T ss_conf 17045114656530357889897733078887887538855567776025503455045001478202249871755058
Q ss_pred EECCCCCHHHHHHHHHH
Q ss_conf 86479998999999997
Q gi|254780217|r 184 IKFNSLSENNLYKALEQ 200 (347)
Q Consensus 184 i~f~~l~~~~~~~~L~~ 200 (347)
T Consensus 329 v~L~~L~~~dl~~ILte 345 (442)
T PRK05201 329 VELDALTEEDFVRILTE 345 (442)
T ss_pred EECCCCCHHHHHHHHCC
T ss_conf 88244999999999678