HHsearch alignment for GI: 254780217 and conserved domain: PRK05201

>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.
Probab=98.52  E-value=2.1e-06  Score=71.16  Aligned_cols=70  Identities=16%  Similarity=0.407  Sum_probs=54.3

Q ss_pred             CHHHHHHHHHHCCH------------HHHHHHHHHHHHCCCC--------CCEEEEE------CCCCCCCHHHHCEE-EE
Q ss_conf             10353220554240------------0014567776630343--------4167650------44335730252036-98
Q gi|254780217|r  131 WRVIMIDPVDGMNR------------NAANALLKSLEEPPQK--------VLFILIS------HASPTILSTIRSRC-LS  183 (347)
Q Consensus       131 ~Ki~IId~ad~ln~------------~AaNALLK~LEEPp~~--------t~fiLit------~~~~~il~TI~SRc-~~  183 (347)
T Consensus       249 ~GIVFIDEIDKIa~~~~~~g~DVS~EGVQrdLLpivEGt~V~tK~G~V~TdhILFIasGAFh~sKPSDLIPEl~GRlPv~  328 (442)
T PRK05201        249 NGIVFIDEIDKIAKRGEGSGPDVSREGVQRDLLPLVEGSTVSTKYGMVKTDHILFIASGAFHVAKPSDLIPELQGRFPIR  328 (442)
T ss_pred             CCCEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEE
T ss_conf             17045114656530357889897733078887887538855567776025503455045001478202249871755058


Q ss_pred             EECCCCCHHHHHHHHHH
Q ss_conf             86479998999999997
Q gi|254780217|r  184 IKFNSLSENNLYKALEQ  200 (347)
Q Consensus       184 i~f~~l~~~~~~~~L~~  200 (347)
T Consensus       329 v~L~~L~~~dl~~ILte  345 (442)
T PRK05201        329 VELDALTEEDFVRILTE  345 (442)
T ss_pred             EECCCCCHHHHHHHHCC
T ss_conf             88244999999999678