HHsearch alignment for GI: 254780217 and conserved domain: PRK05818
>PRK05818 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=7e-37 Score=316.59 Aligned_cols=183 Identities=20% Similarity=0.260 Sum_probs=151.9
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCC
Q ss_conf 89816631179898889999999999817799886431210126788679999678987545300100010134212323
Q gi|254780217|r 32 RMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVIT 111 (347)
Q Consensus 32 ~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~ 111 (347)
T Consensus 6 n~~halLl~~~~G~~~~~~~~~~~k~LlC~~--~~~PCG~C~s------C~~i~~g~HPD~~~i~p--------e~~sIk 69 (262)
T PRK05818 6 NKTHPLLLIERKGSFLKPFLYEYLTSIVCTK--ANGFCKTCES------CLKILNGKYNDFYLIFD--------QKNPIK 69 (262)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC--CCCCCCCCHH------HHHHHCCCCCCEEEEEC--------CCCCCC
T ss_conf 8985056644877646999999999862289--9999988862------78675589997799716--------645577
Q ss_pred HHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCC
Q ss_conf 78875544310222111-12103532205542400014567776630343416765044335730252036988647999
Q gi|254780217|r 112 VDEIRRIRYFLSLTANT-GYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASPTILSTIRSRCLSIKFNSLS 190 (347)
Q Consensus 112 vd~IR~l~~~~~~~~~~-~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~ 190 (347)
T Consensus 70 ieqir~li~~l~~~s~e~~g~KV~II~~Ae~Mt~~AANALLKtLEEPp~nt~fIL~t~~~~~LLPTIrSRC~~~~~~~~~ 149 (262)
T PRK05818 70 KEDALSIINKLNRPSVESNGKKIYIIYGIEKLNKQSANSLLKLIEEPPKNTYGIFTTRNENNILNTILSRCVQYVVLSKE 149 (262)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHCCCCCCCCHH
T ss_conf 98999999998211400288489998777874999999999861289878389997388143730888770144666434
Q ss_pred HHHHHHHHHH----HCCCCCHHHH-HHHHHHCCCCHHHHHHHHCC
Q ss_conf 8999999997----2788896789-99999759897899988145
Q gi|254780217|r 191 ENNLYKALEQ----LKIMGWDSKR-DFVKIAAYGSVARAIKILHY 230 (347)
Q Consensus 191 ~~~~~~~L~~----~~~~~~~~~~-~~~~~~s~Gs~~~A~~ll~~ 230 (347)
T Consensus 150 ~~~~~~~~~~~~~~~~i~~~~~s~de~~~~~~~gs~~~~l~il~~ 194 (262)
T PRK05818 150 KKVPFKVESNDRYFQYILLSFYSVDEQLQAYNNGSFSKLKNIIET 194 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 667888874088898764101107999988616768889999999