HHsearch alignment for GI: 254780217 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=0 Score=455.02 Aligned_cols=215 Identities=27% Similarity=0.398 Sum_probs=201.8
Q ss_pred CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCC-CCCCHHHCCCCCCCH
Q ss_conf 9665555875656109299999999999828898166311798988899999999998177998-864312101267886
Q gi|254780217|r 1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDF-SKAPVRMCNPDPCSP 79 (347)
Q Consensus 1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~-~~~~~~~~~~~~~~~ 79 (347)
T Consensus 6 vlarKYRP~~F~dvVGQ~~vv~~L~nai~~~ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~----- 80 (462)
T PRK06305 6 VSSRKYRPQTFSEILGQDAVVTVLKNALRFNRAAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAI----- 80 (462)
T ss_pred HHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-----
T ss_conf 788763889876604909999999999984997623430389985999999999999679999888898876688-----
Q ss_pred HHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
Q ss_conf 79999678987545300100010134212323788755443102221111210353220554240001456777663034
Q gi|254780217|r 80 FVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQ 159 (347)
Q Consensus 80 ~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~ 159 (347)
T Consensus 81 -C~~I~~g~~~DViEiDaAs~---------~gVddIRel~e~v~~~P~~~~yKVyIIDEvhmLs~~AfNALLKtLEEPP~ 150 (462)
T PRK06305 81 -CKEISSGTSLDVIEIDGASH---------RGIEDIRQINETVLFTPSKSQYKIYIIDEVHMLTKEAFNSLLKTLEEPPQ 150 (462)
T ss_pred -HHHHHCCCCCCEEEECCCCC---------CCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHCCCC
T ss_conf -89986389998686435534---------46689999997710088677505999815211799999999998618987
Q ss_pred CCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHH----HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf 341676504433573025203698864799989999999----97278889678999999759897899988145
Q gi|254780217|r 160 KVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKAL----EQLKIMGWDSKRDFVKIAAYGSVARAIKILHY 230 (347)
Q Consensus 160 ~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L----~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~ 230 (347)
T Consensus 151 ~v~FILaTTe~~KIp~TIlSRCQrf~F~~i~~~~I~~~L~~I~~~E~i~~e~~AL~lIA~~a~GsmRDAlslLDQ 225 (462)
T PRK06305 151 HVKFFLATTEIHKIPGTILSRCQKMHLKRIPEETIIDKLALIAQQDGIETSREALLPIARAAQGSLRDAESLYDY 225 (462)
T ss_pred CEEEEEEECCHHHCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 749999818814285478765402332579999999999999998399859999999999858958789999999