HHsearch alignment for GI: 254780217 and conserved domain: PRK07003

>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00  E-value=0  Score=442.13  Aligned_cols=250  Identities=26%  Similarity=0.394  Sum_probs=217.4

Q ss_pred             CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHH
Q ss_conf             96655558756561092999999999998288981663117989888999999999981779988643121012678867
Q gi|254780217|r    1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPF   80 (347)
Q Consensus         1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~   80 (347)
T Consensus         5 vlark~RP~~f~e~vGQ~~v~~~l~nal~~~rl~haylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pcg~C~~------   78 (816)
T PRK07003          5 VLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGVTSQPCGVCRA------   78 (816)
T ss_pred             HHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH------
T ss_conf             77755089857662384999999999997098631475117898888899999999867899999897877555------


Q ss_pred             HHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
Q ss_conf             99996789875453001000101342123237887554431022211112103532205542400014567776630343
Q gi|254780217|r   81 VKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQK  160 (347)
Q Consensus        81 ~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~  160 (347)
T Consensus        79 C~~i~~g~~~d~iEiDaAS~~---------~vd~~r~l~~~~~y~p~~~r~KvyiiDEvHmls~~afnalLKtlEepP~h  149 (816)
T PRK07003         79 CREIDEGRFVDYVEMDAASNR---------GVDEMAALLERAVYAPVDARFKVYMIDEVHMLTNHAFNAMLKTLEEPPPH  149 (816)
T ss_pred             HHHHHCCCCCCEEEEECCCCC---------CHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCCC
T ss_conf             787755887754786355435---------76899999986224786674479998415433999999999840379866


Q ss_pred             CCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHH----HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCH----
Q ss_conf             41676504433573025203698864799989999999----9727888967899999975989789998814577----
Q gi|254780217|r  161 VLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKAL----EQLKIMGWDSKRDFVKIAAYGSVARAIKILHYDC----  232 (347)
Q Consensus       161 t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L----~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~~----  232 (347)
T Consensus       150 v~FilaTTd~~k~p~tilSRc~~f~l~~~~~~~i~~~l~~i~~~E~i~~e~~al~lia~~a~GsmRDalsl~dQaia~~~  229 (816)
T PRK07003        150 VKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSA  229 (816)
T ss_pred             EEEEEECCCHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf             48999558801152889877765223679999999999999998299779999999999767737888859999998469


Q ss_pred             -HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH
Q ss_conf             -9999999998403234322899999999983167699
Q gi|254780217|r  233 -DKIISSYIDLIHIPRQEYALQKMQQIADELLSQDQKI  269 (347)
Q Consensus       233 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (347)
T Consensus       230 g~~~~~~v~~mLG~~d~----~~~~~ll~al~~~d~~~  263 (816)
T PRK07003        230 NEVTETAVSGMLGALDQ----TYMVRLLDALAAADGPE  263 (816)
T ss_pred             CCCCHHHHHHHHCCCCH----HHHHHHHHHHHHCCHHH
T ss_conf             97379999998588877----89999999999558999