HHsearch alignment for GI: 254780217 and conserved domain: PRK07133

>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00  E-value=0  Score=440.89  Aligned_cols=211  Identities=29%  Similarity=0.393  Sum_probs=194.4

Q ss_pred             CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC-CCCCCCCHHHCCCCCCCH
Q ss_conf             9665555875656109299999999999828898166311798988899999999998177-998864312101267886
Q gi|254780217|r    1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQN-PDFSKAPVRMCNPDPCSP   79 (347)
Q Consensus         1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~-~~~~~~~~~~~~~~~~~~   79 (347)
T Consensus         7 ~L~RKYRPk~F~EVIGQe~Vv~tL~nAI~~gRIaHAYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~-----   81 (718)
T PRK07133          7 ALYRKYRPKKFDEIKGQDHIIETLKNIIKSGKISHAYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIE-----   81 (718)
T ss_pred             HHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH-----
T ss_conf             899872899754422859999999999974997505862389986889999999999679999999997702143-----


Q ss_pred             HHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
Q ss_conf             79999678987545300100010134212323788755443102221111210353220554240001456777663034
Q gi|254780217|r   80 FVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQ  159 (347)
Q Consensus        80 ~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~  159 (347)
T Consensus        82 -~----~~~s~DViEIDAASn---------~gVDdIReLie~v~y~P~~gkYKVyIIDEvHMLS~~AfNALLKtLEEPP~  147 (718)
T PRK07133         82 -N----FNNNLDIIEMDAASN---------NGVDEIRELRENVKNLPQISKYKIYIIDEVHMLSKSAFNALLKTLEEPPK  147 (718)
T ss_pred             -C----CCCCCCEEEECCCCC---------CCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf             -0----478987377545566---------88899999999825588778724999966200799999999985027987


Q ss_pred             CCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHH----HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf             341676504433573025203698864799989999999----97278889678999999759897899988145
Q gi|254780217|r  160 KVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKAL----EQLKIMGWDSKRDFVKIAAYGSVARAIKILHY  230 (347)
Q Consensus       160 ~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L----~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~  230 (347)
T Consensus       148 hvvFILaTTep~KIP~TIlSRCQrFdFkrI~~~~I~~~L~~I~~kE~I~~e~eAL~lIA~~a~GSmRDAlSlLDQ  222 (718)
T PRK07133        148 HVIFILATTDVQKIPLTILSRVQRFNFRRISEDVIVHQLENILEKEKIKYEKNALKLIASLASGSLRDALSIADQ  222 (718)
T ss_pred             CCEEEEEECCHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             827999708825484877412203358889999999999999998599778999999999768848889879999