HHsearch alignment for GI: 254780217 and conserved domain: PRK07133
>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=0 Score=440.89 Aligned_cols=211 Identities=29% Similarity=0.393 Sum_probs=194.4
Q ss_pred CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC-CCCCCCCHHHCCCCCCCH
Q ss_conf 9665555875656109299999999999828898166311798988899999999998177-998864312101267886
Q gi|254780217|r 1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQN-PDFSKAPVRMCNPDPCSP 79 (347)
Q Consensus 1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~-~~~~~~~~~~~~~~~~~~ 79 (347)
T Consensus 7 ~L~RKYRPk~F~EVIGQe~Vv~tL~nAI~~gRIaHAYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~----- 81 (718)
T PRK07133 7 ALYRKYRPKKFDEIKGQDHIIETLKNIIKSGKISHAYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIE----- 81 (718)
T ss_pred HHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH-----
T ss_conf 899872899754422859999999999974997505862389986889999999999679999999997702143-----
Q ss_pred HHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
Q ss_conf 79999678987545300100010134212323788755443102221111210353220554240001456777663034
Q gi|254780217|r 80 FVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQ 159 (347)
Q Consensus 80 ~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~ 159 (347)
T Consensus 82 -~----~~~s~DViEIDAASn---------~gVDdIReLie~v~y~P~~gkYKVyIIDEvHMLS~~AfNALLKtLEEPP~ 147 (718)
T PRK07133 82 -N----FNNNLDIIEMDAASN---------NGVDEIRELRENVKNLPQISKYKIYIIDEVHMLSKSAFNALLKTLEEPPK 147 (718)
T ss_pred -C----CCCCCCEEEECCCCC---------CCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf -0----478987377545566---------88899999999825588778724999966200799999999985027987
Q ss_pred CCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHH----HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf 341676504433573025203698864799989999999----97278889678999999759897899988145
Q gi|254780217|r 160 KVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKAL----EQLKIMGWDSKRDFVKIAAYGSVARAIKILHY 230 (347)
Q Consensus 160 ~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L----~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~ 230 (347)
T Consensus 148 hvvFILaTTep~KIP~TIlSRCQrFdFkrI~~~~I~~~L~~I~~kE~I~~e~eAL~lIA~~a~GSmRDAlSlLDQ 222 (718)
T PRK07133 148 HVIFILATTDVQKIPLTILSRVQRFNFRRISEDVIVHQLENILEKEKIKYEKNALKLIASLASGSLRDALSIADQ 222 (718)
T ss_pred CCEEEEEECCHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 827999708825484877412203358889999999999999998599778999999999768848889879999