HHsearch alignment for GI: 254780217 and conserved domain: PRK07452
>PRK07452 DNA polymerase III subunit delta; Validated.
Probab=98.38 E-value=5e-05 Score=60.14 Aligned_cols=202 Identities=12% Similarity=0.055 Sum_probs=120.3
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCH
Q ss_conf 98166311798988899999999998177998864312101267886799996789875453001000101342123237
Q gi|254780217|r 33 MHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITV 112 (347)
Q Consensus 33 l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~v 112 (347)
T Consensus 1 ~Pv-Yll~GeE~~li~~~~~~i~~~~~~~~~------------------------~~fn~~~~dg-------~---e--~ 43 (326)
T PRK07452 1 MPI-YLYWGEDDFALNQAIEKLIDQVVDPEW------------------------KSFNYSRLDG-------D---D--A 43 (326)
T ss_pred CCE-EEEEECCHHHHHHHHHHHHHHCCCCCC------------------------CCCCEEEECC-------C---C--C
T ss_conf 988-999838289999999999996089544------------------------6762378737-------5---5--4
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH---HHHHHHHHHHHHCCCCCCEEEEECC-CC---CCCHHHHCEEEEEE
Q ss_conf 88755443102221111210353220554240---0014567776630343416765044-33---57302520369886
Q gi|254780217|r 113 DEIRRIRYFLSLTANTGYWRVIMIDPVDGMNR---NAANALLKSLEEPPQKVLFILISHA-SP---TILSTIRSRCLSIK 185 (347)
Q Consensus 113 d~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~---~AaNALLK~LEEPp~~t~fiLit~~-~~---~il~TI~SRc~~i~ 185 (347)
T Consensus 44 ~~~~~~l~~a~T~Pf~~~~RlVvvk~a~~~~~~~~~~~~~l~~~l~~~p~~t~lv~~~~~k~D~R~K~~K~l~k~~~~~e 123 (326)
T PRK07452 44 EQAIQALNEAMTPPFGSGGRLVWLKNSPLCQGCSEELLAELERTLPLIPENTHLLLTNTKKPDGRLKSTKLLQKLAEEKE 123 (326)
T ss_pred CHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEE
T ss_conf 25999999862788778855999836610024878899999998617999759999846763237787899984011345
Q ss_pred CCCC---CHHHHHHHHH----HHCCCCCHHHHHHHHHHCCCCHHHHHHHH-------CCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 4799---9899999999----72788896789999997598978999881-------45779999999998403234322
Q gi|254780217|r 186 FNSL---SENNLYKALE----QLKIMGWDSKRDFVKIAAYGSVARAIKIL-------HYDCDKIISSYIDLIHIPRQEYA 251 (347)
Q Consensus 186 f~~l---~~~~~~~~L~----~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll-------~~~~~~~~~~~~~~l~~~~~~~~ 251 (347)
T Consensus 124 f~~~~~~~~~~l~~wi~~~~~~~g~~i~~~a~~~Lv~~~G~dl~~l~~EleKL~ly~~~~~~~It~e~V~~lv~-~~~~- 201 (326)
T PRK07452 124 FSLPPPWDGEGQKQLVERTAQELGVKLTPEAAELLAEAVGNDSRRLYNELEKLALYAENSEKPISAEDVKALVS-NTTQ- 201 (326)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC-CCCC-
T ss_conf 40688657999999999999986999899999999998684399999999999986289997068999998827-7644-
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 899999999983167699999999
Q gi|254780217|r 252 LQKMQQIADELLSQDQKIAFDFLI 275 (347)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~ 275 (347)
T Consensus 202 --~iF~L~dAi~~~~~~~Al~~l~ 223 (326)
T PRK07452 202 --NSLQLADALLQGNTGEALALID 223 (326)
T ss_pred --CHHHHHHHHHCCCHHHHHHHHH
T ss_conf --0999999998689999999999