HHsearch alignment for GI: 254780217 and conserved domain: PRK07452

>PRK07452 DNA polymerase III subunit delta; Validated.
Probab=98.38  E-value=5e-05  Score=60.14  Aligned_cols=202  Identities=12%  Similarity=0.055  Sum_probs=120.3

Q ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCH
Q ss_conf             98166311798988899999999998177998864312101267886799996789875453001000101342123237
Q gi|254780217|r   33 MHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITV  112 (347)
Q Consensus        33 l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~v  112 (347)
T Consensus         1 ~Pv-Yll~GeE~~li~~~~~~i~~~~~~~~~------------------------~~fn~~~~dg-------~---e--~   43 (326)
T PRK07452          1 MPI-YLYWGEDDFALNQAIEKLIDQVVDPEW------------------------KSFNYSRLDG-------D---D--A   43 (326)
T ss_pred             CCE-EEEEECCHHHHHHHHHHHHHHCCCCCC------------------------CCCCEEEECC-------C---C--C
T ss_conf             988-999838289999999999996089544------------------------6762378737-------5---5--4


Q ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH---HHHHHHHHHHHHCCCCCCEEEEECC-CC---CCCHHHHCEEEEEE
Q ss_conf             88755443102221111210353220554240---0014567776630343416765044-33---57302520369886
Q gi|254780217|r  113 DEIRRIRYFLSLTANTGYWRVIMIDPVDGMNR---NAANALLKSLEEPPQKVLFILISHA-SP---TILSTIRSRCLSIK  185 (347)
Q Consensus       113 d~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~---~AaNALLK~LEEPp~~t~fiLit~~-~~---~il~TI~SRc~~i~  185 (347)
T Consensus        44 ~~~~~~l~~a~T~Pf~~~~RlVvvk~a~~~~~~~~~~~~~l~~~l~~~p~~t~lv~~~~~k~D~R~K~~K~l~k~~~~~e  123 (326)
T PRK07452         44 EQAIQALNEAMTPPFGSGGRLVWLKNSPLCQGCSEELLAELERTLPLIPENTHLLLTNTKKPDGRLKSTKLLQKLAEEKE  123 (326)
T ss_pred             CHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEE
T ss_conf             25999999862788778855999836610024878899999998617999759999846763237787899984011345


Q ss_pred             CCCC---CHHHHHHHHH----HHCCCCCHHHHHHHHHHCCCCHHHHHHHH-------CCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf             4799---9899999999----72788896789999997598978999881-------45779999999998403234322
Q gi|254780217|r  186 FNSL---SENNLYKALE----QLKIMGWDSKRDFVKIAAYGSVARAIKIL-------HYDCDKIISSYIDLIHIPRQEYA  251 (347)
Q Consensus       186 f~~l---~~~~~~~~L~----~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll-------~~~~~~~~~~~~~~l~~~~~~~~  251 (347)
T Consensus       124 f~~~~~~~~~~l~~wi~~~~~~~g~~i~~~a~~~Lv~~~G~dl~~l~~EleKL~ly~~~~~~~It~e~V~~lv~-~~~~-  201 (326)
T PRK07452        124 FSLPPPWDGEGQKQLVERTAQELGVKLTPEAAELLAEAVGNDSRRLYNELEKLALYAENSEKPISAEDVKALVS-NTTQ-  201 (326)
T ss_pred             ECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC-CCCC-
T ss_conf             40688657999999999999986999899999999998684399999999999986289997068999998827-7644-


Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             899999999983167699999999
Q gi|254780217|r  252 LQKMQQIADELLSQDQKIAFDFLI  275 (347)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~  275 (347)
T Consensus       202 --~iF~L~dAi~~~~~~~Al~~l~  223 (326)
T PRK07452        202 --NSLQLADALLQGNTGEALALID  223 (326)
T ss_pred             --CHHHHHHHHHCCCHHHHHHHHH
T ss_conf             --0999999998689999999999