HHsearch alignment for GI: 254780217 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=440.44 Aligned_cols=210 Identities=25% Similarity=0.365 Sum_probs=193.8
Q ss_pred CCHHHHCCHHHHHHHHHHHHHCCC------------CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
Q ss_conf 756561092999999999998288------------98166311798988899999999998177998864312101267
Q gi|254780217|r 9 VYNQRLFGHEDIEKFLSQYYCSGR------------MHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDP 76 (347)
Q Consensus 9 ~~~~~i~G~~~~~~~L~~~~~~~~------------l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~ 76 (347)
T Consensus 2 ~~f~~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~-~~~~cg~C~~-- 78 (395)
T PRK07940 2 GVWDRLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDP-GVPGCGECRA-- 78 (395)
T ss_pred CCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCCHH--
T ss_conf 9701315929999999999983634344333346876603763689987889999999999669999-9999987878--
Q ss_pred CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 88679999678987545300100010134212323788755443102221111210353220554240001456777663
Q gi|254780217|r 77 CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE 156 (347)
Q Consensus 77 ~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE 156 (347)
T Consensus 79 ----C~~i~~g~hpDv~~i~p--------~~~~i~id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m~~~a~NalLKtLEE 146 (395)
T PRK07940 79 ----CRTVLAGTHPDVRVVVP--------EGLSIGVDEVREIVQIAARRPTTGRWRIVVIEDADRLTERAANALLKAVEE 146 (395)
T ss_pred ----HHHHHCCCCCCEEEEEC--------CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCHHHHHHHHHHHCC
T ss_conf ----99987689987189826--------877688999999999985273037955999807787489999999985217
Q ss_pred CCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHH
Q ss_conf 034341676504433573025203698864799989999999972788896789999997598978999881457799
Q gi|254780217|r 157 PPQKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKALEQLKIMGWDSKRDFVKIAAYGSVARAIKILHYDCDK 234 (347)
Q Consensus 157 Pp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~~~~ 234 (347)
T Consensus 147 Pp~~~~fiL~t~~~~~llpTI~SRcq~~~f~~~~~~~i~~~L~~~-~gi~~~~A~~aA~~s~G~igrA~~la~d~~~~ 223 (395)
T PRK07940 147 PPPRTVWLLCAPSVEDVLPTIRSRCRHVALRTPSVEAVADVLVRR-DGVDPETAQWAARASGGHIGRARRLATDEEAR 223 (395)
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHH
T ss_conf 888869998739978744688744000237999999999999870-19998999999998089889999980688899