HHsearch alignment for GI: 254780217 and conserved domain: PRK07940

>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=100.00  E-value=0  Score=440.44  Aligned_cols=210  Identities=25%  Similarity=0.365  Sum_probs=193.8

Q ss_pred             CCHHHHCCHHHHHHHHHHHHHCCC------------CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
Q ss_conf             756561092999999999998288------------98166311798988899999999998177998864312101267
Q gi|254780217|r    9 VYNQRLFGHEDIEKFLSQYYCSGR------------MHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDP   76 (347)
Q Consensus         9 ~~~~~i~G~~~~~~~L~~~~~~~~------------l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~   76 (347)
T Consensus         2 ~~f~~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~-~~~~cg~C~~--   78 (395)
T PRK07940          2 GVWDRLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDP-GVPGCGECRA--   78 (395)
T ss_pred             CCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCCHH--
T ss_conf             9701315929999999999983634344333346876603763689987889999999999669999-9999987878--


Q ss_pred             CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             88679999678987545300100010134212323788755443102221111210353220554240001456777663
Q gi|254780217|r   77 CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE  156 (347)
Q Consensus        77 ~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE  156 (347)
T Consensus        79 ----C~~i~~g~hpDv~~i~p--------~~~~i~id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m~~~a~NalLKtLEE  146 (395)
T PRK07940         79 ----CRTVLAGTHPDVRVVVP--------EGLSIGVDEVREIVQIAARRPTTGRWRIVVIEDADRLTERAANALLKAVEE  146 (395)
T ss_pred             ----HHHHHCCCCCCEEEEEC--------CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCHHHHHHHHHHHCC
T ss_conf             ----99987689987189826--------877688999999999985273037955999807787489999999985217


Q ss_pred             CCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHH
Q ss_conf             034341676504433573025203698864799989999999972788896789999997598978999881457799
Q gi|254780217|r  157 PPQKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKALEQLKIMGWDSKRDFVKIAAYGSVARAIKILHYDCDK  234 (347)
Q Consensus       157 Pp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~~~~  234 (347)
T Consensus       147 Pp~~~~fiL~t~~~~~llpTI~SRcq~~~f~~~~~~~i~~~L~~~-~gi~~~~A~~aA~~s~G~igrA~~la~d~~~~  223 (395)
T PRK07940        147 PPPRTVWLLCAPSVEDVLPTIRSRCRHVALRTPSVEAVADVLVRR-DGVDPETAQWAARASGGHIGRARRLATDEEAR  223 (395)
T ss_pred             CCCCEEEEEEECCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHH
T ss_conf             888869998739978744688744000237999999999999870-19998999999998089889999980688899