HHsearch alignment for GI: 254780217 and conserved domain: PRK09087
>PRK09087 hypothetical protein; Validated.
Probab=97.81 E-value=0.00067 Score=51.05 Aligned_cols=164 Identities=13% Similarity=0.135 Sum_probs=96.0
Q ss_pred CHHHH-CCH--HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHC
Q ss_conf 56561-092--999999999998288981663117989888999999999981779988643121012678867999967
Q gi|254780217|r 10 YNQRL-FGH--EDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMAS 86 (347)
Q Consensus 10 ~~~~i-~G~--~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (347)
T Consensus 19 ~~dnF~vs~~N~~a~~~l~-~~~~w~~~-~~~L~Gp~gsGKTHL~~~~~~~~~a-------------------------- 70 (226)
T PRK09087 19 GRDDLVVTESNRAAVSLVD-RWPNWPSP-VVVLAGPVGSGKTHLASIWREKADA-------------------------- 70 (226)
T ss_pred CCCCEEECCCHHHHHHHHH-HCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCC--------------------------
T ss_conf 7336477576999999998-47267777-5899899999886999999998099--------------------------
Q ss_pred CCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CCCEEE
Q ss_conf 8987545300100010134212323788755443102221111210353220554240001456777663034-341676
Q gi|254780217|r 87 HALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQ-KVLFIL 165 (347)
Q Consensus 87 ~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~-~t~fiL 165 (347)
T Consensus 71 ------~~~~~~----------~~~~~~~-------~----~~~~~~~~idd~d~~~~d-Ee~LFhl~N~~~~~~~~LLl 122 (226)
T PRK09087 71 ------LLVHPN----------EIGSDAA-------N----AAAERPVLIEDIDAGGFD-ETGLFHLINSVRQAGTSLLM 122 (226)
T ss_pred ------EEECHH----------HCCHHHH-------H----HHCCCCEEEECCCCCCCC-HHHHHHHHHHHHHCCCEEEE
T ss_conf ------683668----------7474667-------6----532798899748777747-89999999999853987999
Q ss_pred EECC-CCC---CCHHHHCEE---EEEECCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf 5044-335---730252036---9886479998999999997----27888967899999975989789998814
Q gi|254780217|r 166 ISHA-SPT---ILSTIRSRC---LSIKFNSLSENNLYKALEQ----LKIMGWDSKRDFVKIAAYGSVARAIKILH 229 (347)
Q Consensus 166 it~~-~~~---il~TI~SRc---~~i~f~~l~~~~~~~~L~~----~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~ 229 (347)
T Consensus 123 ts~~~p~~l~~~L~DL~SRL~~~~~~~I~~pdD~ll~~~L~k~~~~r~l~l~~~v~~yll~r~~Rs~~~l~~~l~ 197 (226)
T PRK09087 123 TSRLWPSAWNVKLPDLKSRLKAATVVEIGEPDDALLSGVIFKLFADRQLYVEPHVVYYLVSRMERSLFAAQTIVE 197 (226)
T ss_pred ECCCCHHHCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 889895666762468999985785798359998999999999987576578888999999845889999999999